NO07G02480, NO07G02480 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G02480 vs. NCBI_GenBank
Match: EWM27130.1 (Protein of unknown function DUF829, TMEM53 [Nannochloropsis gaditana]) HSP 1 Score: 367.9 bits (943), Expect = 3.400e-98 Identity = 178/309 (57.61%), Postives = 219/309 (70.87%), Query Frame = 0 Query: 23 DAAVPFNDGPNVGRFRVTKRAALRIVPVPAEGETPRAIESRD--KVKLVVVLLGWLGCQDRHLKKYAEMYHESMNCEVVLRHTVPASRLLRRKQWGAVRAAEEIMTLIPLFFPDAKVVVHYFSNGGCFVHRRMLLLQNGHYRQGDARRFCCDPEPPTDDYQFPQLAGTIFDSCPVAADAEAGARAVSARVQSPIIRLLMYATIRFGLEIYGIAQSWRYEQKYIEHIENDHTLVPSLYIFSEDDTITDPALVERVVAKRKAYLTSQGLPADVMLETWKITDPSLHVCHYARYPIEYQKKIKDFLQRQGLI 330 D F DGP++GRFRVTK L I P E + E + KVK VV+L GWL CQD+HL+KYA +YHE C+VVLR+TVPA +LRRKQ VR AE+IM+LIPLFFP AKV+VHYFSNGGCFVH R +++ F QLA TIFDSCP AADA+ GA+A+SA +++P RL Y TIRFGLE+YG+AQ WRYE+KY+EHIENDH L+PSLYI+S+DDTITD ALVER+V KRKAY TSQG+ ADVM+ TWK+++PS HVCHYA +P Y+ ++ FLQ GL+ Sbjct: 2 DEDAVFEDGPSIGRFRVTKLKGLNICPAIDENGASASSEEENGYKVKFVVLLFGWLTCQDKHLRKYAALYHEHFACKVVLRYTVPAGNVLRRKQSEVVRTAEDIMSLIPLFFPRAKVLVHYFSNGGCFVH-RXXXXXXXXXXXXXXXXXXXXXXXXXEEHSFSQLAATIFDSCPAAADAQTGAKALSAALRAPFARLATYITIRFGLEVYGLAQCWRYERKYLEHIENDHLLIPSLYIYSDDDTITDAALVERIVTKRKAYFTSQGIVADVMVRTWKVSEPSSHVCHYAHHPDAYRAEVGKFLQAHGLL 309
BLAST of NO07G02480 vs. NCBI_GenBank
Match: XP_007898045.1 (PREDICTED: transmembrane protein 53 [Callorhinchus milii]) HSP 1 Score: 99.0 bits (245), Expect = 3.000e-17 Identity = 78/274 (28.47%), Postives = 130/274 (47.45%), Query Frame = 0 Query: 69 VVVLLGWLGCQDRHLKKYAEMYHESMNCEVVLRHTVP------ASRLLRRKQWGAVRAAEEIMTLIPLFFPDAKVVVHYFSNGGCFVHRRMLLLQNGHYRQGDARRFCCDPEPPTDDYQFPQLAGTIFDSCPVAADAEAGARAVSARVQ---SPIIRL------LMYATIRFGLEIYGIAQSWRYEQKYIEHIENDHTLVPSLYIFSEDDTITDPALVERVVAKRKAYLTSQGLPADVMLETWKIT---DPSLHVCHYARYPIEYQKKIKDFLQ 325 VV+LLGW GC+++HL KY+ +Y + C +V+ +TVP S L R G + ++ L + + +V H FSNGGC ++R ++ LQ Y +G R Y+ + GTIFDS P + + G RA+ + ++ +P I++ + A IRF L Y ++ W + ++ D + P LY++S+ D + +E V+ RK L W + D S HV H+ +P +Y ++ FL+ Sbjct: 77 VVILLGWAGCREKHLAKYSHIY-KKKGC-IVISYTVPWEHIFFTSLLSTRSLHGTAKKLLDL--LFDIGIEEHPIVFHVFSNGGCMLYRYIIELQ---YDRGATR------------YRKLNVVGTIFDSGPGDKNFQGGIRALHSILRPSNNPFIKIFATVTFVFVALIRFML--YPASKFW--SLSLYDSLKQDPSRWPQLYLYSKSDKVISYKDIENVIRARK------------QLRVWVESVDFDTSQHVNHFREFPEKYSIRVLSFLK 315
BLAST of NO07G02480 vs. NCBI_GenBank
Match: PIK41799.1 (putative transmembrane protein [Apostichopus japonicus]) HSP 1 Score: 95.1 bits (235), Expect = 4.300e-16 Identity = 76/271 (28.04%), Postives = 127/271 (46.86%), Query Frame = 0 Query: 62 SRDKVKLVVVLLGWLGCQDRHLKKYAEMYHESMNCEVVLRHTVPASRLLRRKQWGAVRAAEEIMTLIPLFFPDAKVVVHYFSNGGCFVHRR-MLLLQNGHYRQGDARRFCCDPEPPTDDYQFPQLAGTIFDSCPVAADAEAGARAV-SARVQSPI---IRLLMYATIRFGLEIYGIAQSWRYE--QKYIEHIENDHTLVPSLYIFSEDDTITDPALVERVVAKRKAYLTSQGLPADVMLETWKIT-DPSLHVCHYARYPIEYQKKIKDFLQ 325 S K + V+LLGW+GC D++L KY+ +Y +R+T P S+ A + + L L + VV H FSNGG FV+R M LL +G Y + +LAG+I DS P + +AV +R +P+ + L+++ T F L+ + + + +E IE + P L+++S+ D I D +E V+A+R+A + +E W++ + S HV H+ ++ EY + F+Q Sbjct: 28 SPSKREPAVILLGWVGCSDKNLAKYSAIYQS--KGYTTIRYTAPRSKTFTNPNSLRDIAVKLLDLLFDLGLDENPVVFHVFSNGGIFVYRYCMELLTDGEY----------------PHFMQIKLAGSILDSAPSDPRPQTALKAVYHSRHHTPVMTTLLLMLFYTFIFILQFILPRRLFGFSSLNTLMESIEASPSKRPQLFLYSKADNICDYKRIEEVIARRQA----------LGVEVWQVCWEDSEHVAHFIKHKEEYIDTVLQFVQ 270
BLAST of NO07G02480 vs. NCBI_GenBank
Match: XP_013924391.1 (PREDICTED: transmembrane protein 53 [Thamnophis sirtalis]) HSP 1 Score: 93.2 bits (230), Expect = 1.600e-15 Identity = 80/290 (27.59%), Postives = 136/290 (46.90%), Query Frame = 0 Query: 47 IVPVPAEGETPRAIESRDKVK--LVVVLLGWLGCQDRHLKKYAEMYHESMNCEVVLRHTVPASRLLRRKQWGAVRAAEEIMT-LIPLFFPDAKV-----VVHYFSNGGCFVHRRMLLLQNGHYRQGDARRFCCDPEPPTDDYQFPQLAGTIFDSCPVAADAEAGARAVSARVQS-----PIIRLLMYATIRFGLEIYGIAQSWRYEQKYIEHIENDHTLVPSLYIFSEDDTITDPALVERVVAKRKAYLTSQGLPADVMLETWKITDPSLHVCHYARYPIEYQKKIKDFL 324 +V P E +E DK+ +VV++LGW GC+DR+L+KY+ +Y + C VV+R+T P + + G +++ + + T L+ L F D KV + H FSNGG ++R ++ L H +Q +Q ++ GT+FDS P + G RA+S + S LL +A + L I + + + E + N + P LY++S+ D++ + +E +V R+ + V+++T S HV H YP Y F+ Sbjct: 11 VVDFPLERSAETYLEKGDKINPPVVVIMLGWAGCKDRYLEKYSAIYQQK-GC-VVIRYTAPWRHVFFSESLG-IKSMQTLATKLLELLF-DYKVETKPLLFHVFSNGGFMLYRYIVELL--HTQQ---------------QFQHLRVVGTVFDSAPGKKNLRGGVRALSVVLASYNMCIKHFLLLSFALLVVTLRIVLYPMTRFIHESHYEAMLNQPSKWPELYLYSKADSVILASDIENMVQARRQH--------RVLVKTVNFVH-SDHVSHLRAYPTSYATHCISFM 270
BLAST of NO07G02480 vs. NCBI_GenBank
Match: XP_007444286.1 (PREDICTED: transmembrane protein 53 [Python bivittatus]) HSP 1 Score: 92.0 bits (227), Expect = 3.600e-15 Identity = 81/288 (28.12%), Postives = 129/288 (44.79%), Query Frame = 0 Query: 47 IVPVPAEGETPRAIESRDKV-KLVVVLLGWLGCQDRHLKKYAEMYHESMNCEVVLRHTVPASRLLRRKQWGAVRAAEEIMTLIPLFFPDAKV-----VVHYFSNGGCFVHRRMLLLQNGHYRQGDARRFCCDPEPPTDDYQFPQLAGTIFDSCPVAADAEAGARAVSARVQS-----PIIRLLMYATIRFGLEIYGIAQSWRYEQKYIEHIENDHTLVPSLYIFSEDDTITDPALVERVVAKRKAYLTSQGLPADVMLETWKITDPSLHVCHYARYPIEYQKKIKDFL 324 +V P E +E DK+ + VV++LGW GC+DR+L+KY+ +Y + C VV+R+T P + + G L+ L F D KV + H FSNGG ++R ++ L H +Q +Q ++ GTIFDS P + G RA+S + S LL +A + L I + + + E + N + P LY +S+ D++ + VE +V R+ + V+++T S HV H YP Y F+ Sbjct: 11 VVDFPLERSAETPVEKGDKINRPVVIMLGWAGCKDRYLEKYSAIYLQK-GC-VVIRYTAPWRFVFFSESLGIKSLQNLAKKLLELLF-DIKVQTKPLLFHVFSNGGFMLYRYIVELL--HTQQ---------------QFQHLRVVGTIFDSAPGRKNLRGGLRALSVVLASYNVCVKYFLLLSFAVLVVTLRIMLYPVTRFVHESHYEAMLNQPSKWPELYFYSKADSVILASDVENMVQARRQH--------QVLVKTVDFVH-SDHVSHLRAYPTSYATHCISFM 269
BLAST of NO07G02480 vs. NCBI_GenBank
Match: XP_015812818.1 (PREDICTED: transmembrane protein 53 [Nothobranchius furzeri] >XP_015812819.1 PREDICTED: transmembrane protein 53 [Nothobranchius furzeri]) HSP 1 Score: 91.7 bits (226), Expect = 4.700e-15 Identity = 69/267 (25.84%), Postives = 123/267 (46.07%), Query Frame = 0 Query: 69 VVVLLGWLGCQDRHLKKYAEMYHESMNCEVVLRHTVPASRLLRRKQWGAVRAAEEIMTLIPLFF----PDAKVVVHYFSNGGCFVHRRMLLLQNGHYRQGDARRFCCDPEPPTDDYQFPQLA--GTIFDSCPVAADAEAGARAVSARVQ---SPIIR---LLMYATIRFGLEIYGIAQSWRYEQKYIEHIENDHTLVPSLYIFSEDDTITDPALVERVVAKRKAYLTSQGLPADVMLETWKITDPSLHVCHYARYPIEYQKKIKDFL 324 VV+LLGW GC+D+HL KY+ +Y+E C V +R+T P + + +G + + L+ + + ++ + H FSNGG + R M+ L + D QF L G + DS P A+ RA+SA + SP++R L ++A F L + + + + + +++ P +++S D + + R + + L +G+P D ++ S HVCH+ +P +Y +K + FL Sbjct: 29 VVILLGWAGCKDKHLSKYSSIYNE-QGC-VTIRYTAPLKTVFISESFGYKELSSTALKLLEILYDYEVENSPIFFHIFSNGGFMLFRYMVELLH-------------------SDKQFSSLCVIGAVVDSAPGNANIRGALRALSATLGPNISPLLRYFLLALFAVTVFLLRVVLYPLTKFIHKNHYDAVQDRPPAWPHFHLYSRADQV----IRHRDIEQFMDTLKKKGVPVD----SYDFVSSS-HVCHFRDFPEQYTRKCRSFL 265
BLAST of NO07G02480 vs. NCBI_GenBank
Match: XP_018767918.1 (PREDICTED: transmembrane protein 53 isoform X2 [Serinus canaria]) HSP 1 Score: 90.5 bits (223), Expect = 1.100e-14 Identity = 81/295 (27.46%), Postives = 125/295 (42.37%), Query Frame = 0 Query: 38 RVTKRAALRIVPVPAEGETPRAIESRDKVKLVVVLLGWLGCQDRHLKKYAEMYHESMNCEVVLRHTVPASRLLRRKQWGAVRAAEEIMTLIPLFF----PDAKVVVHYFSNGGCFVHRRMLLLQNGHYRQGDARRFCCDPEPPTDDYQFPQLAGTIFDSCPVAADAEAGARA-----VSARVQSPIIRLLMYATIRFGLEIYGIAQSWRYEQKYIEHIENDHTLVPSLYIFSEDDTITDPALVERVVAKRKAYLTSQGLPADVMLETWKITDPSLHVCHYARYPIEYQKKIKDFL 324 R + A + + P A G T R VV+LLGW GCQD++L KY+ +Y + C V+R+T P + + +G L+ L F + V+ H FSNGG ++R ++ + H +Q ++AGTIFDS P + + RA VS V L +AT L I + Q + + + + P LY++S+ D I + VE + + R+ G+P ++T +D S HV H YP Y FL Sbjct: 4 RGLREAVVELEPGQARGSTDRGPAEGQP---VVILLGWAGCQDKYLAKYSAVYSQK-GC-TVIRYTAPWRMIFFSESFGIRSLQTPARRLLELLFDYRVENRPVLFHVFSNGGAMLYRYIIEALHTH-----------------TPFQSLKVAGTIFDSAPGRRNLQGALRALATVLVSMNVLLKYFLLFTFATTAVVLRILLYPLTRFIHQSHYDALLKAPSRWPELYLYSQADLIIKASEVELMASARE----QLGVP----VKTVDFSD-SPHVSHMRVYPTYYHSLCTTFL 267
BLAST of NO07G02480 vs. NCBI_GenBank
Match: XP_005740310.1 (PREDICTED: transmembrane protein 53 [Pundamilia nyererei]) HSP 1 Score: 89.7 bits (221), Expect = 1.800e-14 Identity = 70/267 (26.22%), Postives = 123/267 (46.07%), Query Frame = 0 Query: 69 VVVLLGWLGCQDRHLKKYAEMYHESMNCEVVLRHTVPASRLLRRKQWGAVRAAEEIMTLIPLFF----PDAKVVVHYFSNGGCFVHRRMLLLQNGHYRQGDARRFCCDPEPPTDDYQFPQLA--GTIFDSCPVAADAEAGARAVSARVQ---SPIIR---LLMYATIRFGLEIYGIAQSWRYEQKYIEHIENDHTLVPSLYIFSEDDTITDPALVERVVAKRKAYLTSQGLPADVMLETWKITDPSLHVCHYARYPIEYQKKIKDFL 324 VV+LLGW GC+D+HL KY+ +Y+E C V +R+T P + + +G + L+ + + ++ + H FSNGG ++R ++ L + D QF L+ G I DS P + + RA++A + SP++R L+++A F L I + + + + +++ P +++S DD + +E + L +G+P D ++ S HV H+ +P EY K DFL Sbjct: 29 VVILLGWAGCKDKHLSKYSSIYNE-QGC-VTIRYTAPLKTVFISESFGYKELRNTALKLLEILYDYEVENSPIFFHTFSNGGFMLYRYIVELLH-------------------SDKQFSSLSVVGAIVDSAPGSGNVRGALRALTATLGPKISPVLRYILLVLFAVTVFLLRIVLYPLTKYIHKNHYDAVQDRPPAWPHFFLYSRDDQVIRHKDIESFLET----LKQKGVPVD----SFDFVSSS-HVGHFRYFPEEYTLKCHDFL 265
BLAST of NO07G02480 vs. NCBI_GenBank
Match: XP_024130061.1 (transmembrane protein 53 [Oryzias melastigma]) HSP 1 Score: 89.7 bits (221), Expect = 1.800e-14 Identity = 74/270 (27.41%), Postives = 125/270 (46.30%), Query Frame = 0 Query: 69 VVVLLGWLGCQDRHLKKYAEMYHESMNCEVVLRHTVPASRLLRRKQWGAVRAAEEIMTLIPLFF----PDAKVVVHYFSNGGCFVHRRML-LLQNGHYRQGDARRFCCDPEPPTDDYQFPQLA--GTIFDSCPVAADAEAGARAVSARVQ---SPIIR---LLMYATIRFGLEIYGIAQSWRYEQKYIEHIENDHTLVPSLYIFSEDDTITDPALVERVV--AKRKAYLTSQGLPADVMLETWKITDPSLHVCHYARYPIEYQKKIKDFL 324 VV+LLGW GC+D+HL KY+ +Y E C V +R+T P + + +G + M L+ + + ++ VV H FSNGG ++R ++ LLQ+ D QF L G + DS P + + RA++A + SP+IR L ++A F L + + + + + +++ P Y++SE D + + +ER + KRK V ++ + S HV H+ +P +Y K + FL Sbjct: 29 VVILLGWAGCKDKHLSKYSSIYSE-QGC-VTIRYTAPLKTVFISESFGYKELSSTAMKLLEILYDYEVENSPVVFHVFSNGGFMLYRYIIELLQS--------------------DKQFSSLCVIGAVVDSAPGSGNVRGALRALTATLGPQISPVIRYTLLALFAVSVFLLRVALYPLTKFIHKNHYDAVQDRPPAWPHFYLYSEADQVIRHSDIERFMDSLKRKG----------VSVDGFDFVS-SHHVSHFRDFPQQYTLKCRSFL 265
BLAST of NO07G02480 vs. NCBI_GenBank
Match: XP_004565382.1 (transmembrane protein 53 [Maylandia zebra]) HSP 1 Score: 89.4 bits (220), Expect = 2.300e-14 Identity = 70/267 (26.22%), Postives = 123/267 (46.07%), Query Frame = 0 Query: 69 VVVLLGWLGCQDRHLKKYAEMYHESMNCEVVLRHTVPASRLLRRKQWGAVRAAEEIMTLIPLFF----PDAKVVVHYFSNGGCFVHRRMLLLQNGHYRQGDARRFCCDPEPPTDDYQFPQLA--GTIFDSCPVAADAEAGARAVSARVQ---SPIIR---LLMYATIRFGLEIYGIAQSWRYEQKYIEHIENDHTLVPSLYIFSEDDTITDPALVERVVAKRKAYLTSQGLPADVMLETWKITDPSLHVCHYARYPIEYQKKIKDFL 324 VV+LLGW GC+D+HL KY+ +Y+E C V +R+T P + + +G + L+ + + ++ + H FSNGG ++R ++ L + D QF L+ G I DS P + + RA++A + SP++R L+++A F L I + + + + +++ P +++S DD + +E + L +G+P D ++ S HV H+ +P EY K DFL Sbjct: 29 VVILLGWAGCKDKHLSKYSSIYNE-QGC-VTIRYTAPLKTVFISESFGYKELRNTALKLLEILYDYEVENSPIFFHTFSNGGFMLYRYIVELLH-------------------SDKQFSSLSVVGAIVDSAPGSGNVRGALRALTATLGPKISPVLRYILLVLFAVTVFLLRIVLYPLTKYIHKNHYDAVQDRPPAWPHFFLYSRDDQVIRHKDIEGFLET----LKQKGVPVD----SFDFVSSS-HVGHFRYFPEEYTLKCHDFL 265 The following BLAST results are available for this feature:
BLAST of NO07G02480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G02480 ID=NO07G02480|Name=NO07G02480|organism=Nannochloropsis oceanica|type=gene|length=1954bpback to top protein sequence of NO07G02480.1 >NO07G02480.1-protein ID=NO07G02480.1-protein|Name=NO07G02480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=443bpback to top protein sequence of NO07G02480.2 >NO07G02480.2-protein ID=NO07G02480.2-protein|Name=NO07G02480.2|organism=Nannochloropsis oceanica|type=polypeptide|length=340bpback to top protein sequence of NO07G02480.3 >NO07G02480.3-protein ID=NO07G02480.3-protein|Name=NO07G02480.3|organism=Nannochloropsis oceanica|type=polypeptide|length=331bpback to top Synonyms
Publications
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