NO07G01220, NO07G01220 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G01220 vs. NCBI_GenBank
Match: EWM27239.1 (hypothetical protein Naga_100038g16 [Nannochloropsis gaditana]) HSP 1 Score: 376.3 bits (965), Expect = 2.200e-100 Identity = 304/658 (46.20%), Postives = 353/658 (53.65%), Query Frame = 0 Query: 92 TQGLGSMLSTPLTPSASLIASSVVEADAKQQQLLKDSLTADLKLLLHEFERFQQATAAAAGTGGVGEEEAAERSTKVEFFLGYIERVLHDLAGADASKLQDLEVRIKTSLLPLKGQVVSQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPLAREETVMSTYGPFTHSRVAAADAVFLSSSSAASRLMPPVSFRRDQSXXXXXXXXXXXXXXXXXXXXXXXXDDLDLECFSLIMDE---AAATAPFTTAGNGGKDLPANGSCVDDDMTDAGSLTSEESS-VFVSSPRESSSSLSTVSTGLDPTSSNSGNKRTLPXXXXXXXXXXXXXXXXXXXXXXXXXXXLQQPLKRARSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVSKPLLRQVEYQCGACADTYTAASSLNPWWALERQECPKCKKVQVPRIDINLPANTMEYHPALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPMQASQLLSLLEHARTCPGNHAAEKHQAVCTSAKYLMLHVRDCDGRTLDGEACGFSWCRPCKHLLGHLVRCYEAEKCQICCFSHQEEEEKVEKKVMMSVEEMIEEKGMRVDTYRSLTSL 746 ++G + PL S +ASSV EADAKQQQLLKDSLTADLKLLLHEFERFQQATA + G E EA ER+ KVEFFLGYI +VL +LAGADA KLQ+LEVRIKTSLLPLKGQVV++L XXXXXXXXXXXXXX SP++ E+ + G + AA LMP V +R S D+EC SL+M+E TA GG++ G D+D+TDA SL SEESS VF SP E+S L T+S GL G KR Q LKRARS XXXXXXXXXXXXXX KP +RQVEYQCG CA++Y+AA+SLNPWWALE+QECP+CKK+Q+PRIDINLPANTM+YHPAL XXXXXXXX SP QASQ+L L+ HARTCPG+H +E H+AVCTS KYLMLHVRDCDG+TLDGEACGFSWCRPCKHLLGHLVRCYE+E+C IC ++ E E+ V E +R YR+LTSL Sbjct: 69 SEGRYTSFLAPLKSLTSPVASSVFEADAKQQQLLKDSLTADLKLLLHEFERFQQATALVSREGS-KEVEAMERAAKVEFFLGYIGKVLQELAGADAPKLQELEVRIKTSLLPLKGQVVNKL-ASSLLSSSALGGLQHEPSSSASIXXXXXXXXXXXXXXTTPPISPVSGEKMTVQDDGRRERTHPTAA------------ALMPSVRVQRLDSSSSGATTCSENSEEGRGQLD-------DMECLSLLMEEDGQGLGRPQDRTA--GGREW---GLGPDEDVTDAASLVSEESSNVFAPSPGEASEMLETISRGL-----GLGQKR--------LALSEGSTGSLGLASASFTSVESMQQLKRARST-----------VIPSISXXXXXXXXXXXXXXGHGSSDVSEPSMSVASAEKPQVRQVEYQCGVCAESYSAAASLNPWWALEKQECPQCKKLQIPRIDINLPANTMDYHPAL-------LAEEGXXXXXXXXLGLGGSGLVPGEEFRGMGKGGEDSAVGGGIGVPEEEDGQAFSPAQASQILELMSHARTCPGHHHSEAHRAVCTSTKYLMLHVRDCDGKTLDGEACGFSWCRPCKHLLGHLVRCYESEQCSIC---RPQKREPCEEAVACKRE---TSGAVREGVYRALTSL 663
BLAST of NO07G01220 vs. NCBI_GenBank
Match: CBN74618.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 147.9 bits (372), Expect = 1.300e-31 Identity = 105/200 (52.50%), Postives = 125/200 (62.50%), Query Frame = 0 Query: 505 PLLRQVEYQCGACADTYTAASSLNPWWALERQECPKCKKVQVPRIDINLPANTMEYHPALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPMQASQLLSLLEHARTCPGNHAAEKHQAVCTSAKYLMLHVRDCDGRTLDGEACGFSWCRPCKHLLGHLVRCYEAEKCQ 705 P R+V YQCGACA +Y A S NPWW L RQECP C K+Q+PR+DI P N +E H A XXXXXXXXXXXXXXXXXXXXXXXXXXXXX L QA++LL L+ HAR CPGNH + + VC S K+LMLH+RDCDG+T +G+ C WC PC LL HL++C E+ C+ Sbjct: 326 PEPREVRYQCGACAASYAATVSGNPWWLLVRQECPICHKMQIPRVDILNPTNNVESHIAF-------LTENASDGDGSCMDWDGETSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGPTLDSDQAAKLLVLMCHARHCPGNHRSARLAEVCRSVKFLMLHLRDCDGKTRNGDPCPMPWCEPCMSLLHHLIQCPESTGCK 518
BLAST of NO07G01220 vs. NCBI_GenBank
Match: XP_002185494.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC42981.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 141.7 bits (356), Expect = 9.000e-30 Identity = 76/232 (32.76%), Postives = 98/232 (42.24%), Query Frame = 0 Query: 508 RQVEYQCGACADTYTAASSLNPWWALERQECPKCKKVQVPRIDINLPANTMEYHPAL-------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSP--------------------MQASQLLSLLEHARTCPGNHAAEKHQAVCTSAKYLMLHVRDCDGRTLDGEACGFSWCRPCKHLLGHLVRCYEAEKCQIC 707 R VEY C C + Y + NPWWAL + +CPKC+K Q+PR+DI+ PANT+EYHPAL LSP +A++LL L+ HA TCP H + KH+ C + K++MLHVRDC G T + C F WCR KHLL HLV C +A+ C+IC Sbjct: 856 RTVEYMCALCNEVYNSTCDYNPWWALAQHDCPKCRKNQIPRVDISAPANTIEYHPALLAHADENGGSTPTPPAAIVKPVTTVSAPVTSVPKCGNDSDSFGSDLSDDDLDGLLSDTDSEGSGEIGMERIDALSPAEQAENEYFGVEYKGPKLKDSEAARLLILMGHASTCPCKHQSIKHRETCRNTKWMMLHVRDCPGTTSSFDVCPFPWCRKVKHLLYHLVSCRDAKHCEIC 1087
BLAST of NO07G01220 vs. NCBI_GenBank
Match: XP_002286748.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED96389.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 141.7 bits (356), Expect = 9.000e-30 Identity = 81/238 (34.03%), Postives = 97/238 (40.76%), Query Frame = 0 Query: 508 RQVEYQCGACADTYTAASSLNPWWALERQECPKCKKVQVPRIDINLPANTMEYHPAL-----------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPMQASQLLSLLEHARTCPGNHAAEKHQAVCTSAKYLMLHVRDCDGRTLDGEACGFSWCRPCKHLLGHLVRC---YEAEKCQICC 708 R VEY C C + Y + +NPWWAL ECPKC K Q+PR+DI+ P N +EYHPAL X LS QA +LL L+EHA CPG H + KH+ VC S KYLMLHVRDC G +G+ C F WCR KHLL HLV C + ++C ICC Sbjct: 785 RTVEYVCAVCNEGYVSTCEMNPWWALINHECPKCGKNQIPRLDISAPNNVIEYHPALLVQEDGKPVSAPVSNGGDSSSVQMQYLPRHLAKKSSLSDSEVSQTDESDGEGGTEEYFDESSDXEESVNKNALDSFAKEERAEREDYGFEFKGETLSDDQAKRLLILIEHASICPGRHRSAKHRNVCHSTKYLMLHVRDCPGLLSNGDVCPFPWCRKTKHLLYHLVSCEKSNDGKECGICC 1022
BLAST of NO07G01220 vs. NCBI_GenBank
Match: GAX12840.1 (hypothetical protein FisN_15Hh321 [Fistulifera solaris]) HSP 1 Score: 141.7 bits (356), Expect = 9.000e-30 Identity = 106/237 (44.73%), Postives = 125/237 (52.74%), Query Frame = 0 Query: 508 RQVEYQCGACADTYTAASSLNPWWALERQECPKCKKVQVPRIDINLPANTMEYHPAL----------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPMQASQLLSLLEHARTCPGNHAAEKHQAVCTSAKYLMLHVRDCDGRTLDGEACGFSWCRPCKHLLGHLVRCYEAEKCQICCFSHQEEEEK 717 R VEY C C + Y + NPWWAL ++ECPKC+K+Q+PR+DI PAN +EYHPAL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S ++++LL+L+ HA TCP H + H VC SAK++MLHVRDC G T + C F WCR KHLL HLV C C IC H K Sbjct: 449 RNVEYMCALCNEVYNSTCDYNPWWALTQEECPKCQKIQIPRLDIGAPANAIEYHPALLAHADDAGGAAEPSAAPESQDLPIPATAGDDMEYSDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNMSPAEQAESEKFGAEYDGPKFSDSESARLLNLMLHASTCPCRHKSSDHYDVCRSAKWMMLHVRDCPGTTSTFDVCPFPWCRKTKHLLYHLVSCASPRNCAICSSVHLNNNMK 685
BLAST of NO07G01220 vs. NCBI_GenBank
Match: GAX18384.1 (hypothetical protein FisN_15Lh321 [Fistulifera solaris]) HSP 1 Score: 140.2 bits (352), Expect = 2.600e-29 Identity = 84/237 (35.44%), Postives = 102/237 (43.04%), Query Frame = 0 Query: 508 RQVEYQCGACADTYTAASSLNPWWALERQECPKCKKVQVPRIDINLPANTMEYHPAL----------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPMQASQLLSLLEHARTCPGNHAAEKHQAVCTSAKYLMLHVRDCDGRTLDGEACGFSWCRPCKHLLGHLVRCYEAEKCQICCFSHQEEEEK 717 R VEY C C + Y + NPWWAL ++ECPKC+K Q+PR+DI PAN +EYHPAL XXXXXXX X S ++++LL+L+ HA TCP H + H VC SAK++MLHVRDC G T + C F WCR KHLL HLV C C IC H K Sbjct: 450 RNVEYMCALCNEVYNSTCDYNPWWALTQEECPKCQKTQIPRLDIGAPANAIEYHPALLAHADDAGGAAEPSASPESQDLPIPATAGDDMEYSDVDDXXXXXXXGLLSDASLDLDSXESVVLDSENMSPAEQAESEKFGAEYDGPKFSDSESARLLNLMLHASTCPCRHKSSNHYDVCRSAKWMMLHVRDCPGTTSTFDVCPFPWCRKTKHLLYHLVSCVFPRNCAICSTVHLNNNMK 686
BLAST of NO07G01220 vs. NCBI_GenBank
Match: CBJ26178.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 119.8 bits (299), Expect = 3.700e-23 Identity = 62/199 (31.16%), Postives = 84/199 (42.21%), Query Frame = 0 Query: 508 RQVEYQCGACADTYTAASSLNPWWALERQECPKCKKVQVPRIDINLPANTMEYHPALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPMQASQLLSLLEHARTCPGNHAAEKHQAVCTSAKYLMLHVRDCDGRTLDGEACGFSWCRPCKHLLGHLVRCYEAEKCQIC 707 R V Y+C C ++Y + + NPWW+L ECP+C ++Q+PR+D A +++Y A+ LS QAS+LL L+ HARTCPG+HA KH VC S K+ + C WCRPCK LL HLVRC + C+IC Sbjct: 464 RTVSYECSLCKESYPSEIASNPWWSLFLHECPRCHRMQIPRVDATSAAVSVDYIHAV-----CAEEGEGCDSDGYGSESCSDSDDDVTDDGREREGIAAFDTDIIAGDSQAGCKEGRLSTFQASRLLVLMSHARTCPGHHANPKHAEVCRSTKFXXXXXXXXXXXXXXXDPCEHRWCRPCKSLLSHLVRCPDPNTCRIC 657 The following BLAST results are available for this feature:
BLAST of NO07G01220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 7
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G01220 ID=NO07G01220|Name=NO07G01220|organism=Nannochloropsis oceanica|type=gene|length=2241bpback to top protein sequence of NO07G01220.1 >NO07G01220.1-protein ID=NO07G01220.1-protein|Name=NO07G01220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=747bpback to top Synonyms
Publications
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