Naga_100038g16, gene3294 (gene) Nannochloropsis gaditana

Overview
NameNaga_100038g16
Unique Namegene3294
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:379179..383122 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100038g16
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:379179..383122 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0140110transcription regulator activity
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
GO:0009058biosynthetic process
GO:0006464cellular protein modification process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL130ngnoL130Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G01220NO07G01220Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3420rna3420-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3420rna3420Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3420

>rna3420-protein ID=rna3420-protein|Name=rna3420|organism=Nannochloropsis gaditana|type=polypeptide|length=664bp
MSNILAAGDYDMHRSSNVELKQEASANMKSNAQVGLHPSQNQQLLQQQVQ
QPQGQEERGPKTATPPCLSEGRYTSFLAPLKSLTSPVASSVFEADAKQQQ
LLKDSLTADLKLLLHEFERFQQATALVSREGSKEVEAMERAAKVEFFLGY
IGKVLQELAGADAPKLQELEVRIKTSLLPLKGQVVNKLASSLLSSSALGG
LQHEPSSSASIPSPSSSPSSSCSTHTTPPISPVSGEKMTVQDDGRRERTH
PTAAALMPSVRVQRLDSSSSGATTCSENSEEGRGQLDDMECLSLLMEEDG
QGLGRPQDRTAGGREWGLGPDEDVTDAASLVSEESSNVFAPSPGEASEML
ETISRGLGLGQKRLALSEGSTGSLGLASASFTSVESMQQLKRARSTVIPS
ISSNSISTTTTSSVSVGHGSSDVSEPSMSVASAEKPQVRQVEYQCGVCAE
SYSAAASLNPWWALEKQECPQCKKLQIPRIDINLPANTMDYHPALLAEEG
DDDDEEEGLGLGGSGLVPGEEFRGMGKGGEDSAVGGGIGVPEEEDGQAFS
PAQASQILELMSHARTCPGHHHSEAHRAVCTSTKYLMLHVRDCDGKTLDG
EACGFSWCRPCKHLLGHLVRCYESEQCSICRPQKREPCEEAVACKRETSG
AVREGVYRALTSLC
back to top
Synonyms
Publications