NO05G01710, NO05G01710 (gene) Nannochloropsis oceanica

Overview
NameNO05G01710
Unique NameNO05G01710
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3246
Alignment locationchr5:466962..470207 -

Link to JBrowse

Properties
Property NameValue
DescriptionGlucose-methanol-choline oxidoreductase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:466962..470207 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016614oxidoreductase activity, acting on CH-OH group of donors
GO:0050660flavin adenine dinucleotide binding
GO:0050660flavin adenine dinucleotide binding
GO:0016614oxidoreductase activity, acting on CH-OH group of donors
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0055114oxidation-reduction process
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf
IPR007867GMC_OxRtase_C
IPR000172GMC_OxRdtase_N
Homology
[Close]
BLAST of NO05G01710 vs. NCBI_GenBank
Match: EWM28196.1 (glucose-methanol-choline oxidoreductase [Nannochloropsis gaditana])

HSP 1 Score: 582.8 bits (1501), Expect = 9.600e-163
Identity = 295/465 (63.44%), Postives = 348/465 (74.84%), Query Frame = 0 
Query:    9 REGGGEKEDFGKAWSWKEVLPYFVKSEDYAVKGAKDEM-----CGDVSTTAAAAATGVVHGVGGEWRVERQRLSWELLDKFRDACAEHGIPKVTDFNKGFNEGSSYFHVNQWNGIRWNTSKAWLHPITTHRSNLTVRTGVHVLKVILDPAGTTALGVEFAHFTSST-VIEKAYAGLETILAAGAVGSPHLLQXXXXXXXXXXXXXXXXXXXXXXXXXANLQDHLQLRTVFTVKNVETLNEQYARWWGRVKMGWAYLRHRRGPLSMAPSQVGVFCKSDNTQSRANLQYHVQPLSLDKFGEPLHAFPAFTASVCHLRPSSRGHILLRDSDPRSPPLIQPNYLSTSEDRAIAADAIRLTRRLVLESKALAPFSPQEYIPGSRYASQEELEAAAGRVGTTIFHPAGTCKMGRGDNAMAVLDGRMKVRGVRRLRVCDTSVMPRITSGNTNSPTVMIAEKGSDFINQEHGT 468
            R+   +  + G+ WSW+ VLP F KSED+A   +  E+      GD+   ++      +HGVGGEWRVE+QRLSW++LD FRDAC E GIPKV DFN G N GSSYFHVNQ  G RWNTSKAWLHPI   R+NLTV T VHVLKV+LD +  +ALGVEFA     T V+E+AYAGLETILAAGAVGSPHLLQ                         ANLQDHLQLR VF +  + TLN++YA WWGRVKMG  YL  RRGPLSMAPSQVGVFCKS+ T+ R +L++HVQPLSLD+FGEPLH FPAFTASVCHL+P+SRG +LLR+ DPR+PP IQPNYL+T++DRA+AA A+RLTRRLVL S+A  PF P+EY PG    SQ ELE AAGRVGTTIFHPAGTCKMGR D+ +AVLD +++VRG+ RLRVCDTS MP ITSGNT+SPT+MIAEK SDF++  HGT
Sbjct:  173 RKESAKDGENGEVWSWRGVLPDFTKSEDFAAGASIQEVERGSEGGDL-YKSSPPKQDAIHGVGGEWRVEKQRLSWKVLDTFRDACEEQGIPKVEDFNGGNNFGSSYFHVNQRGGWRWNTSKAWLHPIMGRRANLTVLTHVHVLKVLLDKSNGSALGVEFARSEVGTGVVERAYAGLETILAAGAVGSPHLLQLSGVGPPAPLRSADVPVKHALSGVGANLQDHLQLRMVFRISGLPTLNDEYASWWGRVKMGVEYLWDRRGPLSMAPSQVGVFCKSEATRRRPDLEFHVQPLSLDRFGEPLHPFPAFTASVCHLQPTSRGSVLLRNRDPRAPPRIQPNYLATAKDRAVAARALRLTRRLVLGSRAFLPFKPEEYAPGIACQSQAELEEAAGRVGTTIFHPAGTCKMGRADDPLAVLDAKLRVRGIERLRVCDTSAMPVITSGNTSSPTLMIAEKASDFLHAAHGT 636
[Close]
BLAST of NO05G01710 vs. NCBI_GenBank
Match: WP_094565991.1 (GMC family oxidoreductase [Herbaspirillum sp. meg3] >ASU41100.1 choline dehydrogenase [Herbaspirillum sp. meg3])

HSP 1 Score: 451.1 bits (1159), Expect = 4.400e-123
Identity = 240/445 (53.93%), Postives = 291/445 (65.39%), Query Frame = 0 
Query:   21 AWSWKEVLPYFVKSEDYAVKGAKDEMCGDVSTTAAAAATGVVHGVGGEWRVERQRLSWELLDKFRDACAEHGIPKVTDFNKGFNEGSSYFHVNQWNGIRWNTSKAWLHPITTHRSNLTVRTGVHVLKVILDPA--GTTALGVEFAHFTSSTVIEKAYAGLETILAAGAVGSPHLLQXXXXXXXXXXXXXXXXXXXXXXXXXANLQDHLQLRTVFTVKNVETLNEQYARWWGRVKMGWAYLRHRRGPLSMAPSQVGVFCKSDNTQSRANLQYHVQPLSLDKFGEPLHAFPAFTASVCHLRPSSRGHILLRDSDPRSPPLIQPNYLSTSEDRAIAADAIRLTRRLVLESKALAPFSPQEYIPGSRYASQEELEAAAGRVGTTIFHPAGTCKMGRGDNAMAVLDGRMKVRGVRRLRVCDTSVMPRITSGNTNSPTVMIAEKGSDFINQ 464
            +W W +VLP F KSED+   G +                   HG GGEWRVE+QRLSWE+LD FRDA AE GIPK+ DFN+G NEGSSYF VNQ  GIRWN SKA+L P      NL + TG HV ++ ++ A  G   +GVEF         E A    ETILAAGAVGSPH+LQ                          NLQDHLQ+RT F VK V+TLN     W+G++K+G  Y   + GP+SMAPSQ+GVF KSD +Q+ ANL+YHVQPLSL+KFG+PLH FPAFTASVC+LRP+SRGHI L   D    P I  NYLST +DR +AAD+++LTR+ +  + AL  + P E  PG  Y S+EEL  AAG +GTTIFHP GTCKMGR D+A+AV+D  ++VRGV  LRV D SVMP ITSGNTNSPTVMIAEK ++ I +
Sbjct:  117 SWRWDQVLPLFKKSEDHYRGGDQ------------------FHGAGGEWRVEKQRLSWEILDAFRDAAAEVGIPKIDDFNRGDNEGSSYFDVNQKRGIRWNASKAFLKP-AMKSGNLEIMTGSHVKRLRIEQAENGPVCVGVEFTGGGKEWYAESA---CETILAAGAVGSPHILQLSGIGPANLLQQHQIPVVKELAGVGENLQDHLQIRTAFKVKGVKTLNMMANNWFGKMKIGMEYALFQSGPMSMAPSQLGVFAKSDASQASANLEYHVQPLSLEKFGDPLHPFPAFTASVCNLRPTSRGHIRLGSGDGALAPKITLNYLSTEQDRKVAADSLKLTRK-IAAAPALRKYQPDECKPGVEYQSEEELYKAAGEIGTTIFHPVGTCKMGRADDALAVVDSELRVRGVAGLRVVDASVMPTITSGNTNSPTVMIAEKTAELIRK 538
[Close]
BLAST of NO05G01710 vs. NCBI_GenBank
Match: WP_016836179.1 (GMC family oxidoreductase [Herbaspirillum lusitanum])

HSP 1 Score: 448.7 bits (1153), Expect = 2.200e-122
Identity = 242/443 (54.63%), Postives = 289/443 (65.24%), Query Frame = 0 
Query:   21 AWSWKEVLPYFVKSEDYAVKGAKDEMCGDVSTTAAAAATGVVHGVGGEWRVERQRLSWELLDKFRDACAEHGIPKVTDFNKGFNEGSSYFHVNQWNGIRWNTSKAWLHPITTHRSNLTVRTGVHV--LKVILDPAGTTALGVEFAHFTSSTVIEKAYAGLETILAAGAVGSPHLLQXXXXXXXXXXXXXXXXXXXXXXXXXANLQDHLQLRTVFTVKNVETLNEQYARWWGRVKMGWAYLRHRRGPLSMAPSQVGVFCKSDNTQSRANLQYHVQPLSLDKFGEPLHAFPAFTASVCHLRPSSRGHILLRDSDPRSPPLIQPNYLSTSEDRAIAADAIRLTRRLVLESKALAPFSPQEYIPGSRYASQEELEAAAGRVGTTIFHPAGTCKMGRGDNAMAVLDGRMKVRGVRRLRVCDTSVMPRITSGNTNSPTVMIAEKGSDFI 462
            +W W  VLP F KSED+  KG+ +                  HG GGEWRVE+QRLSWE+LD FRDA AE GIPK+ DFN+G NEGSSYF VNQ  GIRWN SKA+L P      NL V TG HV  L++     G   +GVEF    S    E   A  ETILAAGAVGSPH+LQ                          NLQDHLQ+R  F VK V+TLN     W+G++ +G  Y   + GP+SMAPSQ+GVF KSD +QS ANL+YHVQPLSL+KFG+PLH FPAFTASVC+LRP+SRGHI L  +D    P I  NYLST  DR +AAD+++LTR++V  + AL  + P E  PG  Y S+EEL  AAG +GTTIFHP GTCKMGR D+A AV+D +++VRGV  LRV D SVMP ITSGNTNSPT+MIAEK ++ I
Sbjct:  117 SWRWDRVLPLFRKSEDH-YKGSDE-----------------FHGAGGEWRVEKQRLSWEILDAFRDAAAETGIPKIDDFNRGHNEGSSYFDVNQKRGIRWNASKAFLKP-AMKNGNLDVMTGSHVKRLRIEQRDTGPVCVGVEFTGGGSEWYAE---ATSETILAAGAVGSPHILQLSGIGPAALLQQHQIPVVKDLAGVGENLQDHLQIRMAFKVKGVKTLNMMAGNWYGKMMIGVQYAMFQSGPMSMAPSQLGVFAKSDASQSSANLEYHVQPLSLEKFGDPLHPFPAFTASVCNLRPTSRGHIRLGSNDGALAPKITLNYLSTEADRKVAADSLKLTRKIV-SAPALRKYQPDECKPGVEYQSEEELYKAAGEIGTTIFHPVGTCKMGRADDAQAVVDSQLRVRGVGGLRVVDASVMPTITSGNTNSPTLMIAEKAAELI 536
[Close]
BLAST of NO05G01710 vs. NCBI_GenBank
Match: WP_007882459.1 (GMC family oxidoreductase [Herbaspirillum sp. CF444] >EJL84359.1 choline dehydrogenase-like flavoprotein [Herbaspirillum sp. CF444])

HSP 1 Score: 448.4 bits (1152), Expect = 2.800e-122
Identity = 240/445 (53.93%), Postives = 292/445 (65.62%), Query Frame = 0 
Query:   21 AWSWKEVLPYFVKSEDYAVKGAKDEMCGDVSTTAAAAATGVVHGVGGEWRVERQRLSWELLDKFRDACAEHGIPKVTDFNKGFNEGSSYFHVNQWNGIRWNTSKAWLHPITTHRSNLTVRTGVHVLKVILDPA--GTTALGVEFAHFTSSTVIEKAYAGLETILAAGAVGSPHLLQXXXXXXXXXXXXXXXXXXXXXXXXXANLQDHLQLRTVFTVKNVETLNEQYARWWGRVKMGWAYLRHRRGPLSMAPSQVGVFCKSDNTQSRANLQYHVQPLSLDKFGEPLHAFPAFTASVCHLRPSSRGHILLRDSDPRSPPLIQPNYLSTSEDRAIAADAIRLTRRLVLESKALAPFSPQEYIPGSRYASQEELEAAAGRVGTTIFHPAGTCKMGRGDNAMAVLDGRMKVRGVRRLRVCDTSVMPRITSGNTNSPTVMIAEKGSDFINQ 464
            +W W  VLP F KSED+   G +                   HGVGGEWRVE+QRLSWE+LD FRDA AE GIPK+ DFN+G NEGSSYF VNQ  GIRWN SKA+L P      NL V TG HV ++ ++    G   +GVE   FT       A +  ETILAAGAVGSPH+LQ                          NLQDHLQ+RT F VK V+TLN     W+G++K+G  Y   + GP+SMAPSQ+GVF KSD +Q+ ANL+YHVQPLSL+KFG+PLH FPAFTASVC+LRP+SRGHI L   D    P I  NYLST +DR +AAD+++LTR+ +  + AL  + P E  PG  Y S+EEL  AAG +GTTIFHP GTCKMGR D+A+AV+D +++VRGV  LRV D SVMP ITSGNTNSPT+MIAEK ++ I +
Sbjct:  117 SWRWDNVLPLFKKSEDHYKGGDQ------------------FHGVGGEWRVEKQRLSWEILDAFRDAAAEVGIPKIDDFNRGDNEGSSYFDVNQKRGIRWNASKAFLKP-AMKTGNLDVMTGSHVKRLRIEQGENGPVCVGVE---FTGGGKEWYAESTRETILAAGAVGSPHILQLSGIGPANLLQQHQIPVVKDLAGVGENLQDHLQIRTAFKVKGVKTLNMMANNWFGKMKIGMEYALFQSGPMSMAPSQLGVFAKSDPSQASANLEYHVQPLSLEKFGDPLHPFPAFTASVCNLRPTSRGHIRLGSGDGALAPKITLNYLSTEQDRKVAADSLKLTRK-IAAAPALRKYQPDECKPGVEYQSEEELYKAAGEIGTTIFHPVGTCKMGRDDDALAVVDSQLRVRGVAGLRVVDASVMPTITSGNTNSPTIMIAEKTAELIRK 538
[Close]
BLAST of NO05G01710 vs. NCBI_GenBank
Match: WP_107979705.1 (choline dehydrogenase [Massilia sp. GV045] >PTW30307.1 choline dehydrogenase [Massilia sp. GV045])

HSP 1 Score: 447.6 bits (1150), Expect = 4.800e-122
Identity = 238/443 (53.72%), Postives = 294/443 (66.37%), Query Frame = 0 
Query:   21 AWSWKEVLPYFVKSEDYAVKGAKDEMCGDVSTTAAAAATGVVHGVGGEWRVERQRLSWELLDKFRDACAEHGIPKVTDFNKGFNEGSSYFHVNQWNGIRWNTSKAWLHPITTHRSNLTVRTGVHVLKVILDPA--GTTALGVEFAHFTSSTVIEKAYAGLETILAAGAVGSPHLLQXXXXXXXXXXXXXXXXXXXXXXXXXANLQDHLQLRTVFTVKNVETLNEQYARWWGRVKMGWAYLRHRRGPLSMAPSQVGVFCKSDNTQSRANLQYHVQPLSLDKFGEPLHAFPAFTASVCHLRPSSRGHILLRDSDPRSPPLIQPNYLSTSEDRAIAADAIRLTRRLVLESKALAPFSPQEYIPGSRYASQEELEAAAGRVGTTIFHPAGTCKMGRGDNAMAVLDGRMKVRGVRRLRVCDTSVMPRITSGNTNSPTVMIAEKGSDFI 462
            +W W  VLP F KSED+   GA D                  HG GGEWRVE+QRLSW++LD FRDA  + GIPKV DFN+G N G +YF VNQ  GIRWNT+KA+L    T+R NLT+ TG HV K++++    G    GV+   FT      +A+A  ETILAAG+VGSP LLQ                         ANLQDHLQLR VF V  V+TLN   + W+GR+++G  Y   + GP+SMAPSQ+G F +SD  Q+  NLQYHVQPLSL+KFG+PLHAFPAFTASVC+LRP+SRGH+ +  +D  +PP I P YLST EDR +AADA++LTRR +  + ALA + PQE+ PG  + S EEL AAAG +GTTIFHP GTC+MGR ++  AV+D  ++VRGV  LRV D SVMP ITSGNTNSPT+MIAEK +  I
Sbjct:  117 SWRWDAVLPLFRKSEDHH-GGAND-----------------FHGAGGEWRVEKQRLSWQILDAFRDAAEQTGIPKVDDFNRGDNLGCAYFEVNQKRGIRWNTAKAFL-KAATNRPNLTLMTGCHVEKLLVEQGEHGPVCKGVQ---FTGGGTQWQAHATRETILAAGSVGSPQLLQLSGIGPAGMLHELGVQPVADLPGVGANLQDHLQLRMVFKVNGVKTLNVLASNWFGRMRIGMEYALFQSGPMSMAPSQLGAFARSDAAQATPNLQYHVQPLSLEKFGDPLHAFPAFTASVCNLRPTSRGHVRIASADSYAPPKITPMYLSTPEDRQVAADALKLTRR-IAAAPALAQYQPQEFKPGPAFQSDEELAAAAGAIGTTIFHPVGTCRMGRKNDTSAVVDSELRVRGVAGLRVADASVMPFITSGNTNSPTIMIAEKAAQMI 536
[Close]
BLAST of NO05G01710 vs. NCBI_GenBank
Match: WP_050479125.1 (GMC family oxidoreductase [Herbaspirillum rhizosphaerae])

HSP 1 Score: 445.7 bits (1145), Expect = 1.800e-121
Identity = 239/449 (53.23%), Postives = 292/449 (65.03%), Query Frame = 0 
Query:   21 AWSWKEVLPYFVKSEDYAVKGAKDEMCGDVSTTAAAAATGVVHGVGGEWRVERQRLSWELLDKFRDACAEHGIPKVTDFNKGFNEGSSYFHVNQWNGIRWNTSKAWLHPITTHRSNLTVRTGVHVLKVILDP------AGTTALGVEFAHFTSSTVIEKAYAGLETILAAGAVGSPHLLQXXXXXXXXXXXXXXXXXXXXXXXXXANLQDHLQLRTVFTVKNVETLNEQYARWWGRVKMGWAYLRHRRGPLSMAPSQVGVFCKSDNTQSRANLQYHVQPLSLDKFGEPLHAFPAFTASVCHLRPSSRGHILLRDSDPRSPPLIQPNYLSTSEDRAIAADAIRLTRRLVLESKALAPFSPQEYIPGSRYASQEELEAAAGRVGTTIFHPAGTCKMGRGDNAMAVLDGRMKVRGVRRLRVCDTSVMPRITSGNTNSPTVMIAEKGSDFINQ 464
            +W W +VLP F KSED+   G +                   HG GGEWRVE+QRLSWE+LD FRDA AE GIPK+ DFN+G NEGSSYF VNQ  GIRWN SKA+L P      NL V TG HV ++ ++       +G   +GVE   FT       A +  ETILAAGAVGSPH+LQ                          NLQDHLQ+RT F VK V+TLN     W+G++K+G  Y   + GP+SMAPSQ+GVF +SD +Q+ ANL+YHVQPLSL+KFG+PLH FPAFTASVC+LRP+SRGHI L   D    P I  NYLST +DR +AAD+++LTR+ +  + AL  + P E  PG  Y S+EEL  AAG +GTTIFHP GTCKMGR D+A+AV+D  ++VRGV  LRV D SVMP ITSGNTNSPTVMIAEK ++ I +
Sbjct:  117 SWRWDQVLPLFKKSEDHYKGGDQ------------------FHGAGGEWRVEKQRLSWEILDAFRDAAAEVGIPKIDDFNRGDNEGSSYFDVNQKRGIRWNASKAFLKP-AMKTGNLDVMTGSHVKRLRIEQREVGGISGPVCVGVE---FTGGGKEWYAESTSETILAAGAVGSPHILQLSGIGPADLLQQHQIPVVKDLAGVGENLQDHLQIRTAFKVKGVKTLNMMANNWFGKMKIGMEYALFQSGPMSMAPSQLGVFARSDASQTSANLEYHVQPLSLEKFGDPLHPFPAFTASVCNLRPTSRGHIRLGSGDGAVAPKITLNYLSTEQDRKVAADSLKLTRK-IAAAPALRKYQPDECKPGVEYQSEEELYKAAGEIGTTIFHPVGTCKMGRADDALAVVDSELRVRGVAGLRVVDASVMPTITSGNTNSPTVMIAEKTAELIRK 542
[Close]
BLAST of NO05G01710 vs. NCBI_GenBank
Match: WP_107869613.1 (choline dehydrogenase [Massilia sp. GV016] >PTW81973.1 choline dehydrogenase [Massilia sp. GV016])

HSP 1 Score: 445.3 bits (1144), Expect = 2.400e-121
Identity = 237/443 (53.50%), Postives = 293/443 (66.14%), Query Frame = 0 
Query:   21 AWSWKEVLPYFVKSEDYAVKGAKDEMCGDVSTTAAAAATGVVHGVGGEWRVERQRLSWELLDKFRDACAEHGIPKVTDFNKGFNEGSSYFHVNQWNGIRWNTSKAWLHPITTHRSNLTVRTGVHVLKVILDPA--GTTALGVEFAHFTSSTVIEKAYAGLETILAAGAVGSPHLLQXXXXXXXXXXXXXXXXXXXXXXXXXANLQDHLQLRTVFTVKNVETLNEQYARWWGRVKMGWAYLRHRRGPLSMAPSQVGVFCKSDNTQSRANLQYHVQPLSLDKFGEPLHAFPAFTASVCHLRPSSRGHILLRDSDPRSPPLIQPNYLSTSEDRAIAADAIRLTRRLVLESKALAPFSPQEYIPGSRYASQEELEAAAGRVGTTIFHPAGTCKMGRGDNAMAVLDGRMKVRGVRRLRVCDTSVMPRITSGNTNSPTVMIAEKGSDFI 462
            +W W  VLP F KSED+   GA D                  HG GGEWRVE+QRLSW++LD FRDA  + GIPKV DFN+G N G +YF VNQ  GIRWNT+KA+L    T+R NLT+ TG HV K++++    G    GV+   FT      +A+A  ETILAAG+VGSP LLQ                         ANLQDHLQLR VF V  V+TLN   + W+GR+++G  Y   + GP+SMAPSQ+G F +SD  Q+  NLQYHVQPLSL+KFG+PLHAFPAFTASVC+LRP+SRGH+ +  +D  +PP I P YLST EDR +AADA++LTRR +  + ALA + PQE+ P   + S EEL AAAG +GTTIFHP GTC+MGR ++  AV+D  ++VRGV  LRV D SVMP ITSGNTNSPT+MIAEK +  I
Sbjct:  117 SWRWDAVLPLFRKSEDHH-GGAND-----------------FHGAGGEWRVEKQRLSWQILDAFRDAAEQTGIPKVDDFNRGDNLGCAYFEVNQKRGIRWNTAKAFL-KAATNRPNLTLMTGCHVEKLLVEQGEHGPVCKGVQ---FTGGGTQWQAHATRETILAAGSVGSPQLLQLSGIGPAGMLHELGIQPVADLPGVGANLQDHLQLRMVFKVNGVKTLNVLASNWFGRMRIGMEYALFQSGPMSMAPSQLGAFARSDAAQATPNLQYHVQPLSLEKFGDPLHAFPAFTASVCNLRPTSRGHVRIASADSYAPPKITPMYLSTPEDRQVAADALKLTRR-IAAAPALAQYQPQEFKPSPAFQSDEELAAAAGAIGTTIFHPVGTCRMGRKNDTSAVVDSELRVRGVAGLRVADASVMPFITSGNTNSPTIMIAEKAAQMI 536
[Close]
BLAST of NO05G01710 vs. NCBI_GenBank
Match: WP_034303319.1 (GMC family oxidoreductase [Herbaspirillum sp. RV1423])

HSP 1 Score: 444.9 bits (1143), Expect = 3.100e-121
Identity = 237/445 (53.26%), Postives = 288/445 (64.72%), Query Frame = 0 
Query:   21 AWSWKEVLPYFVKSEDYAVKGAKDEMCGDVSTTAAAAATGVVHGVGGEWRVERQRLSWELLDKFRDACAEHGIPKVTDFNKGFNEGSSYFHVNQWNGIRWNTSKAWLHPITTHRSNLTVRTGVHV--LKVILDPAGTTALGVEFAHFTSSTVIEKAYAGLETILAAGAVGSPHLLQXXXXXXXXXXXXXXXXXXXXXXXXXANLQDHLQLRTVFTVKNVETLNEQYARWWGRVKMGWAYLRHRRGPLSMAPSQVGVFCKSDNTQSRANLQYHVQPLSLDKFGEPLHAFPAFTASVCHLRPSSRGHILLRDSDPRSPPLIQPNYLSTSEDRAIAADAIRLTRRLVLESKALAPFSPQEYIPGSRYASQEELEAAAGRVGTTIFHPAGTCKMGRGDNAMAVLDGRMKVRGVRRLRVCDTSVMPRITSGNTNSPTVMIAEKGSDFINQ 464
            +W W +VLP F KSED+   G +                   HGVGGEWRVE+QRLSWE+LD FRDA AE GIPK+ DFN+G NEGSSYF VNQ  GIRWN SKA+L P      NL + TG HV  L++     G    GVEF+        E A    ETILAAGAVGSPH+LQ                          NLQDHLQ+R  F VK V+TLN     W+G++ +G  Y   + GP+SMAPSQ+GVF KSD +Q+ ANL+YHVQPLSL+KFG+PLH FPAFTASVC+LRP+SRGHI L   D    P I  NYLST +DR +AAD+++LTR+ +  + AL  + P E  PG  Y ++EEL  AAG +GTTIFHP GTCKMGR D+A AV+D +++VRGV  LRV D SVMP ITSGNTNSPT+MIAEK ++ I +
Sbjct:  117 SWRWDQVLPLFKKSEDHYKGGDQ------------------FHGVGGEWRVEKQRLSWEILDAFRDAAAEVGIPKIDDFNRGDNEGSSYFDVNQKRGIRWNASKAFLKP-AMKTGNLDIMTGSHVKRLRIAQTENGPVCTGVEFSGGGKEWYAESA---CETILAAGAVGSPHILQLSGIGSAALLQRHQIPVVKELPGVGENLQDHLQIRMAFKVKGVKTLNMMANNWYGKMMIGVQYAMFQNGPMSMAPSQLGVFAKSDPSQASANLEYHVQPLSLEKFGDPLHPFPAFTASVCNLRPTSRGHIRLGSGDGALAPKITLNYLSTEQDRKVAADSLKLTRK-IAAAPALRKYQPDECKPGVEYQTEEELYKAAGEIGTTIFHPVGTCKMGRDDDAQAVVDSQLRVRGVAGLRVVDASVMPTITSGNTNSPTLMIAEKAAELIRK 538
[Close]
BLAST of NO05G01710 vs. NCBI_GenBank
Match: WP_017452735.1 (GMC family oxidoreductase [Herbaspirillum rubrisubalbicans])

HSP 1 Score: 443.4 bits (1139), Expect = 9.100e-121
Identity = 236/438 (53.88%), Postives = 285/438 (65.07%), Query Frame = 0 
Query:   21 AWSWKEVLPYFVKSEDYAVKGAKDEMCGDVSTTAAAAATGVVHGVGGEWRVERQRLSWELLDKFRDACAEHGIPKVTDFNKGFNEGSSYFHVNQWNGIRWNTSKAWLHPITTHRSNLTVRTGVHVLKVILD--PAGTTALGVEFAHFTSSTVIEKAYAGLETILAAGAVGSPHLLQXXXXXXXXXXXXXXXXXXXXXXXXXANLQDHLQLRTVFTVKNVETLNEQYARWWGRVKMGWAYLRHRRGPLSMAPSQVGVFCKSDNTQSRANLQYHVQPLSLDKFGEPLHAFPAFTASVCHLRPSSRGHILLRDSDPRSPPLIQPNYLSTSEDRAIAADAIRLTRRLVLESKALAPFSPQEYIPGSRYASQEELEAAAGRVGTTIFHPAGTCKMGRGDNAMAVLDGRMKVRGVRRLRVCDTSVMPRITSGNTNSPTVMIAEK 457
            +W W+ VLP+F KSEDY +  ++                   HG GGEWRVE+QRL W++LD FRDA AE+GIPK+ DFN+G NEG SYF VNQ  G+RWN SKA+L P      NLT+ TG HV ++ ++    G    GVEF    S    +      ETIL AGA+GSPH+LQ                          NLQDHLQ+R VF V    TLN   +   G++K+G  YL  + GP+SMAPSQ+G F KSD  Q  ANLQYHVQPLSL+KFG+PLHAFPAFTASVC+LRP+SRGH+ L  +DP   P I  NYLST  D  +AADA+RLTRR+V  S ALA + P+EY PG +Y SQ +L+ AAG VGTTIFHP GTC+MGR D+AMAV+D + +VRGV  L V D SVMP ITSGNTNSPTVMIAEK
Sbjct:  117 SWRWQNVLPWFRKSEDYHLGSSE------------------FHGAGGEWRVEKQRLRWDILDAFRDAAAENGIPKIEDFNRGDNEGCSYFDVNQKRGVRWNASKAFLRP-AMKDGNLTIMTGSHVSRLRMEQGEGGPVCTGVEFTGGGSQWFAQ----AKETILCAGAIGSPHILQMSGIADPALLQQHQIPVVHALPGVGENLQDHLQMRMVFKVDGARTLNAMASTLLGKMKIGLEYLLMQSGPMSMAPSQLGAFAKSDAQQDSANLQYHVQPLSLEKFGDPLHAFPAFTASVCNLRPTSRGHVRLAAADPALAPRITTNYLSTEADLKVAADALRLTRRIV-ASPALARYRPEEYKPGLQYQSQAQLQRAAGDVGTTIFHPVGTCRMGRSDDAMAVVDAQCRVRGVAGLSVADASVMPSITSGNTNSPTVMIAEK 530
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BLAST of NO05G01710 vs. NCBI_GenBank
Match: WP_044531484.1 (GMC family oxidoreductase [Herbaspirillum sp. B65])

HSP 1 Score: 443.4 bits (1139), Expect = 9.100e-121
Identity = 236/438 (53.88%), Postives = 285/438 (65.07%), Query Frame = 0 
Query:   21 AWSWKEVLPYFVKSEDYAVKGAKDEMCGDVSTTAAAAATGVVHGVGGEWRVERQRLSWELLDKFRDACAEHGIPKVTDFNKGFNEGSSYFHVNQWNGIRWNTSKAWLHPITTHRSNLTVRTGVHVLKVILD--PAGTTALGVEFAHFTSSTVIEKAYAGLETILAAGAVGSPHLLQXXXXXXXXXXXXXXXXXXXXXXXXXANLQDHLQLRTVFTVKNVETLNEQYARWWGRVKMGWAYLRHRRGPLSMAPSQVGVFCKSDNTQSRANLQYHVQPLSLDKFGEPLHAFPAFTASVCHLRPSSRGHILLRDSDPRSPPLIQPNYLSTSEDRAIAADAIRLTRRLVLESKALAPFSPQEYIPGSRYASQEELEAAAGRVGTTIFHPAGTCKMGRGDNAMAVLDGRMKVRGVRRLRVCDTSVMPRITSGNTNSPTVMIAEK 457
            +W W+ VLP+F KSEDY +  ++                   HG GGEWRVE+QRL W++LD FRDA AE+GIPK+ DFN+G NEG SYF VNQ  G+RWN SKA+L P      NLT+ TG HV ++ ++    G    GVEF    S    +      ETIL AGA+GSPH+LQ                          NLQDHLQ+R VF V    TLN   +   G++K+G  YL  + GP+SMAPSQ+G F KSD  Q  ANLQYHVQPLSL+KFG+PLHAFPAFTASVC+LRP+SRGH+ L  +DP   P I  NYLST  D  +AADA+RLTRR+V  S ALA + P+EY PG +Y SQ +L+ AAG VGTTIFHP GTC+MGR D+AMAV+D + +VRGV  L V D SVMP ITSGNTNSPTVMIAEK
Sbjct:  117 SWCWQNVLPWFRKSEDYHLGSSE------------------FHGAGGEWRVEKQRLRWDILDAFRDAAAENGIPKIEDFNRGDNEGCSYFDVNQKRGVRWNASKAFLRP-AMKDGNLTIMTGSHVSRLRMEQGEGGPVCTGVEFTGGGSQWFAQ----AKETILCAGAIGSPHILQRSGIADPALLQQHQIPVVHALPGVGENLQDHLQMRMVFKVDGARTLNAMASTLLGKMKIGLEYLLMQSGPMSMAPSQLGAFAKSDAQQDSANLQYHVQPLSLEKFGDPLHAFPAFTASVCNLRPTSRGHVRLAAADPALAPRITTNYLSTEADLKVAADALRLTRRIV-ASPALARYRPEEYKPGLQYQSQAQLQRAAGDVGTTIFHPVGTCRMGRSDDAMAVVDAQCRVRGVAGLSVADASVMPSITSGNTNSPTVMIAEK 530
The following BLAST results are available for this feature:
BLAST of NO05G01710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28196.19.600e-16363.44glucose-methanol-choline oxidoreductase [Nannochlo... [more]
WP_094565991.14.400e-12353.93GMC family oxidoreductase [Herbaspirillum sp. meg3... [more]
WP_016836179.12.200e-12254.63GMC family oxidoreductase [Herbaspirillum lusitanu... [more]
WP_007882459.12.800e-12253.93GMC family oxidoreductase [Herbaspirillum sp. CF44... [more]
WP_107979705.14.800e-12253.72choline dehydrogenase [Massilia sp. GV045] >PTW303... [more]
WP_050479125.11.800e-12153.23GMC family oxidoreductase [Herbaspirillum rhizosph... [more]
WP_107869613.12.400e-12153.50choline dehydrogenase [Massilia sp. GV016] >PTW819... [more]
WP_034303319.13.100e-12153.26GMC family oxidoreductase [Herbaspirillum sp. RV14... [more]
WP_017452735.19.100e-12153.88GMC family oxidoreductase [Herbaspirillum rubrisub... [more]
WP_044531484.19.100e-12153.88GMC family oxidoreductase [Herbaspirillum sp. B65][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003697NSK003697Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G01710.1NO05G01710.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|526105gene_2959Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100004g95gene2352Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G01710.1NO05G01710.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G01710 ID=NO05G01710|Name=NO05G01710|organism=Nannochloropsis oceanica|type=gene|length=3246bp
CTTTGAGCGGCGAGTGATGTTGCTTTTAATTTACACTACATATGTTATTA
GGATGGCGATTGGAATTTTACCGAGGCTCCATCATGAATGCGGTTGGAAA
TTAGGATACTCTTATCTAGAGGTGGTCACTGGTACGACTATAACTCAACA
AGGCTTTACGTCGAACCTGGAGGACTCAGTTGAGTCCTCAACTTAACCTT
TTAACTATTTTTGATGAGCACGTAGACTCTGGCCAAAATGCGCCGCGTCT
AAACCACCACCTCGTGGGGTCGTTGTCCACTAAATCCTATCCCTTACAGA
GTGCCATCAGGAGAATGTACGGGTCATGATTATGGCGATTTACAGTGAGT
CTTAGTGCTCCGATGTACCTTTCCTTTTGCTTGCTTTCAAAAACAAGAAT
AACAAACCATACCACACTGCGGCGGCCCATATCCATAGTGTGAATGACGT
TCACTGAGTGTGCATCTATCTACCATGCGTAAATAGCCAAGAATAGGGCT
CAAAATTCATGACTACAGATAGACTGGAAAGTATATGGTCATTTTGGACG
TCTTTTTATCAAATTGTGGCCACGTCTTTGAGACTGGGCCAGGAACCCTG
GGGCAGAGGAGGCTTCGACAAGCAAGGTGGACTTGAGGTGCCCGTGGTAT
GAAACAAAAAGTGACTCTCACGGCCTCGATTCGGACACATGTATAGCGAC
TCTTGTTGGGACAGCCTTACAACTTTTGATTTCATGGCTAGCTCCTTTTC
CTGGGAGCGCGGGTTCTCCTTTTGGTGGGGTTGCTTTGGTTGCACTTGCT
CTCTCTCTTGGTTTTCACACTCGTGACACAACGAACCATACAGCAAAACA
AGCCAAGCAAAAGAACATGCATTAGCGACAGCAAGGATTACAATGATGAT
AGCTCTACTACCGCGCGGGCGCCGGCTCTTGCTTTGCTGCTGGTCCAAGA
TCCCAGGGCATATCATACCCTCCAGGACATCCGTTATGAAGGCCGCCTCT
TGGTCTTCCTTGTCCGCCAACTACGACTATGTCATTGTTGGTGGAGGCAG
TGCCGGCTGCGTGCTCGCAAATCGTCTCTCGGTCAATCCACGCGTCAAAG
TCCTGCTACTCGAAGCGGGTGGGGATGACCGCTTCATCCCATTTGTCCAT
GTGCCGGTGGGATACCTGTGGAGgtgcgtatgcggctcctatgccttttt
cagccaacaaaggcacgagttcatggtcaattttcatttcttatttccgc
tgaaaaaccctttcttttgtgttctcctccctcctccgcagCATCGCCAA
CCCCAAGGTCGACTGGTGCTTGAAAACGGAGCCCGTCCCAGGCCTGCATG
GCCGCACGTTAGCCTACCCGAGGGGCAAGGTCTTAGGTGGCTGCTCTTCA
ATTAATGGCATGATATATATGCGTGGACAAGCGGAGGATTACGACGGATG
GGCAGGGGAGATTGGGGAGGGAGGGAGGGAGGGGGGGAAAAGGAGGATTT
TGGAAAGGCCTGGTCCTGGAAGGAGGTGTTGCCATACTTTGTCAAGTCGG
AGGATTACGCCGTTAAGGGCGCAAAAGACGAAATGTGTGGTGATGTCTCC
ACTACTGCTGCTGCTGCCGCAACAGGGGTTGTGCATGGTGTAGGAGGGGA
GTGGCGGGTGGAGAGACAAAGGTTGAGTTGGGAGTTGCTTGATAAATTTC
GTGATGCCTGTGCCGAGCACGGCATTCCGAAGGTGACTGATTTCAATAAA
GGGTTCAATGAGGGCTCAAGCTATTTTCACGTGAATCAGTGGAACGGGAT
CAGATGGAACACGAGCAAGgtacgaatgaaaaacgtgagggaaggggtag
gaagggagggagggaggaaagaatggagaaataacgccggtccatattcc
attcacttactttcccgcatccccccccttcttccctccctttctcccct
agGCCTGGCTCCACCCTATTACTACGCACCGGTCCAATCTCACTGTTCGT
ACCGGCGTGCATGTCCTCAAAGTCATCTTGGATCCCGCCGGGACTACTGC
GCTCGGCGTCGAATTCGCACATTTTACCAGCAGCACGGTCATAGAGAAGG
CATATGCAGGGCTGGAGACTATATTAGCCGCAGGGGCGGTTGGCAGCCCT
CATTTACTCCAACTGAGCGGGATCGGCCCTGTGGACGCTCTGAGGGCTGT
GGGCGTGCCCGTTCTACACCCCCTCCCTGGTGTCGGCGCAAACTTACAAG
ACCATCTACAGCTACGCACGGTGTTCACGGTCAAGAACGTCGAAACGCTA
AACGAACAATACGCCCGATGGTGGGGTCGTGTCAAAATGGGATGGGCCTA
CCTCCGGCACCGTCGAGGCCCCCTAAGCATGGCTCCCTCCCAAGTGGGCG
TCTTTTGCAAGAGCGACAATACCCAATCTCGAGCCAACCTCCAATATCAC
GTCCAGCCCCTCTCACTCGATAAGTTTGGGGAGCCTTTGCATGCTTTCCC
TGCCTTTACTGCGTCCGTCTGTCATCTCCGTCCGAGCTCCCGTGGCCACA
TCCTTTTGCGTGACTCCGATCCTCGATCCCCTCCCTTGATCCAGCCAAAT
TATTTGTCGACGTCAGAAGATAGGGCGATCGCCGCTGACGCTATCAGATT
AACGAGAAGGTTAGTTTTGGAGTCCAAAGCTCTAGCACCCTTTTCACCAC
AAGAATATATCCCGGGCTCTCGGTACGCAAGTCAGGAAGAGCTGGAGGCA
GCAGCGGGGAGGGTTGGAACGACGATTTTCCACCCGGCGGGGACATGCAA
AATGGGGCGGGGAGATAATGCAATGGCGGTCCTGGATGGACGGATGAAGG
TGAGGGGGGTGAGGAGGCTTAGAGTGTGCGACACCAGTGTCATGCCGCGG
ATCACTAGTGGGAATACGAATAGCCCGACGGTGATGATTGCGGAGAAGGG
GAGCGACTTTATCAATCAGGAGCATGGAACATGGGGGGGTCAGGGGTAAG
AAAGGGTATAGAGAGAAGATGCGAATGTGTATCTGTGTATCTGTGCGAGG
TTACTAGGGTGACTAGTGGCAATGCAATTAGCCAATCGGTGATTGTGGAG
GAACGGAAAGACGTCACAATCGGTTAATATTGCGTAGACAACTTGTTTGT
AAGCGACGTACAAAAGTGTACAGTGAATTTTCATAAATACCATCAAAAAA
GAAGCACGTTAGTTGGCATGCAATATAATAAAAGGAAGGATTTGAC
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protein sequence of NO05G01710.1

>NO05G01710.1-protein ID=NO05G01710.1-protein|Name=NO05G01710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=473bp
MGRGDWGGREGGGEKEDFGKAWSWKEVLPYFVKSEDYAVKGAKDEMCGDV
STTAAAAATGVVHGVGGEWRVERQRLSWELLDKFRDACAEHGIPKVTDFN
KGFNEGSSYFHVNQWNGIRWNTSKAWLHPITTHRSNLTVRTGVHVLKVIL
DPAGTTALGVEFAHFTSSTVIEKAYAGLETILAAGAVGSPHLLQLSGIGP
VDALRAVGVPVLHPLPGVGANLQDHLQLRTVFTVKNVETLNEQYARWWGR
VKMGWAYLRHRRGPLSMAPSQVGVFCKSDNTQSRANLQYHVQPLSLDKFG
EPLHAFPAFTASVCHLRPSSRGHILLRDSDPRSPPLIQPNYLSTSEDRAI
AADAIRLTRRLVLESKALAPFSPQEYIPGSRYASQEELEAAAGRVGTTIF
HPAGTCKMGRGDNAMAVLDGRMKVRGVRRLRVCDTSVMPRITSGNTNSPT
VMIAEKGSDFINQEHGTWGGQG*
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Synonyms
Publications