NO05G00900, NO05G00900 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO05G00900
Unique Name	NO05G00900
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	1418
Alignment location	chr5:278235..279652 -

Link to JBrowse

Properties


Property Name	Value
Description	Protein tyrosine phosphatase type iva protein 1

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr5	genome	chr5:278235..279652 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0016311	dephosphorylation
GO:0006470	protein dephosphorylation
GO:0016311	dephosphorylation

Vocabulary: **Molecular Function**
Term	Definition
GO:0016791	phosphatase activity
GO:0004725	protein tyrosine phosphatase activity
GO:0016791	phosphatase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR029021	Prot-tyrosine_phosphatase-like
IPR000387	Tyr/Dual-sp_Pase
IPR000242	Tyr_Pase_rcpt/non-rcpt
IPR003595	Tyr_Pase_cat

Homology

[Close]

BLAST of NO05G00900 vs. NCBI_GenBank
Match: XP_005853694.1 (protein tyrosine phosphatase type iva protein 1 [Nannochloropsis gaditana CCMP526] >EKU22665.1 protein tyrosine phosphatase type iva protein 1 [Nannochloropsis gaditana CCMP526] >EWM28224.1 protein tyrosine phosphatase type iva protein 1 [Nannochloropsis gaditana])

HSP 1 Score: 254.6 bits (649), Expect = 3.100e-64
Identity = 137/243 (56.38%), Postives = 158/243 (65.02%), Query Frame = 0

Query:    1 MAPPQTSSQSLHSNSFPYTSTTAVLAGKPTFIVWGKLRFLLMDAPRDSNLAQYLRVAKHYNVTALVRVCEPTYNVAEVEAAGIQMYDMAYDDGCSPPPEVIERWLALVDEVLIKPSRRSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHCVAGLGRAPVLVALALIEHGFGDPSAVVEYIRSQRRGAINMRQLNYLEQYKKRGSETCGGCCVM 244
            MAPPQ++ +  +S S P TS  AVLAGKPTF+ WGKLRFLLMDAPRD NL+ Y+R AK +NV ALVRVCEPTY+  EVEAAGIQ+ DM YDDG SPP +VI+RWLALVD+V  KP+R +                                                          VHCVAGLGRAPVLVALALIEHGFGD SAVVE+IRS+RRGAINMRQLNYLEQY+KR + +CGGC +M
Sbjct:    1 MAPPQSAPKHFYS-SVPQTSAMAVLAGKPTFLAWGKLRFLLMDAPRDCNLSHYIREAKRHNVIALVRVCEPTYDTEEVEAAGIQVLDMGYDDGSSPPQDVIDRWLALVDDVFSKPARLT----PSLSPAASYPGIQSGKSGVALARSMSWRENSHQGAAAASPQELEESEEPAPTIAVHCVAGLGRAPVLVALALIEHGFGDASAVVEFIRSKRRGAINMRQLNYLEQYQKREAVSCGGCSIM 238

[Close]

BLAST of NO05G00900 vs. NCBI_GenBank
Match: CBJ29450.1 (protein tyrosine phosphatase [Ectocarpus siliculosus])

HSP 1 Score: 157.9 bits (398), Expect = 4.000e-35
Identity = 90/222 (40.54%), Postives = 116/222 (52.25%), Query Frame = 0

Query:   23 AVLAGKPTFIVWGKLRFLLMDAPRDSNLAQYLRVAKHYNVTALVRVCEPTYNVAEVEAAGIQMYDMAYDDGCSPPPEVIERWLALVDEVLIKPSRRSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHCVAGLGRAPVLVALALIEHGFGDPSAVVEYIRSQRRGAINMRQLNYLEQYKKRGS-ETCGGCCVM 244
            A ++  P+ + W KLRF++MDAP+ +NL  Y+R  K  NV  +VRVCEPTY  +EVEAAGI++ +M YDDG +PP E+I +WL +V          S                                                          VHCVAGLGRAPVLVA+ALIE+G  DP   VEYIR +RRGAIN +QL+YL+ Y++R S   C  C VM
Sbjct:   33 ATMSAHPSLVEWKKLRFVIMDAPKANNLHLYIRELKKQNVVCVVRVCEPTYPASEVEAAGIKLLEMEYDDGGAPPVEIINKWLDVVQTTFHNAPDSSG-----------------------------------------------PNGSEGPTIAVHCVAGLGRAPVLVAIALIEYG-KDPIKAVEYIRDRRRGAINRKQLSYLDSYERRSSGNGCSSCVVM 206

[Close]

BLAST of NO05G00900 vs. NCBI_GenBank
Match: GAY03021.1 (protein tyrosine phosphatase type IVA protein 1 [Pythium insidiosum] >GAY02118.1 protein tyrosine phosphatase type IVA protein 1 [Pythium insidiosum])

HSP 1 Score: 146.4 bits (368), Expect = 1.200e-31
Identity = 89/216 (41.20%), Postives = 113/216 (52.31%), Query Frame = 0

Query:   28 KPTFIVWGKLRFLLMDAPRDSNLAQYLRVAKHYNVTALVRVCEPTYNVAEVEAAGIQMYDMAYDDGCSPPPEVIERWLALVDEVLIKPSRRSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHCVAGLGRAPVLVALALIEHGFGDPSAVVEYIRSQRRGAINMRQLNYLEQYKKRGSETCGGCCVM 244
            KPT + W  L F++MDAP DSNL  YL+  K +NVT LVR CE TYN   VEAAGI+++++ + DG  P  E++++WL LV +VL K ++  S                                                         VHCVAGLGRAPVLVA+ALIEHG  D    VE+IR  RRGAIN+RQL YLE+Y+ R  +    C VM
Sbjct:    7 KPTLVQWEHLAFVIMDAPNDSNLHLYLKELKKHNVTDLVRACEVTYNRTAVEAAGIRVHELEFPDGEPPDAEILDQWLDLVSDVL-KDNKLDS--------------------------------------------------KNNKAIAVHCVAGLGRAPVLVAIALIEHGL-DAITAVEHIRKFRRGAINLRQLKYLERYEPRRGDK-SKCVVM 169

[Close]

BLAST of NO05G00900 vs. NCBI_GenBank
Match: POM78988.1 (Protein tyrosine phosphatase type IVA protein 1 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 145.2 bits (365), Expect = 2.600e-31
Identity = 87/205 (42.44%), Postives = 110/205 (53.66%), Query Frame = 0

Query:   28 KPTFIVWGKLRFLLMDAPRDSNLAQYLRVAKHYNVTALVRVCEPTYNVAEVEAAGIQMYDMAYDDGCSPPPEVIERWLALVDEVLIKPSRRSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHCVAGLGRAPVLVALALIEHGFGDPSAVVEYIRSQRRGAINMRQLNYLEQYKKR 233
            KPT + W  L F++MDAP DSNL  YL+  K +NVT LVR CE TY+   VEAAGI ++++ + DG SP PE++++WL LV EV+ K +   S                                                         VHCVAGLGRAPVLVA+ALIE+G  DP   VE+IR  RRGAIN+RQL YLE+Y+ R
Sbjct:    7 KPTMVKWQHLSFVIMDAPNDSNLHIYLKELKKHNVTDLVRACEVTYSSESVEAAGIHVHELEFPDGESPDPEILDQWLDLV-EVVFKENFIDS--------------------------------------------------KNNKSIAVHCVAGLGRAPVLVAIALIEYGL-DPINAVEHIRKFRRGAINLRQLKYLEKYQSR 159

[Close]

BLAST of NO05G00900 vs. NCBI_GenBank
Match: EJK58019.1 (hypothetical protein THAOC_21893 [Thalassiosira oceanica])

HSP 1 Score: 144.4 bits (363), Expect = 4.500e-31
Identity = 93/242 (38.43%), Postives = 118/242 (48.76%), Query Frame = 0

Query:    9 QSLHSNSFPYTSTTAVLAG------KPTFIVWGKLRFLLMDAPRDSNLAQYLRVAKHYNVTALVRVCEPTYNVAEVEAAGIQMYDMAYDDGCSPPPEVIERWLALVDEVLIKPSRRSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHCVAGLGRAPVLVALALIEHGFGDPSAVVEYIRSQRRGAINMRQLNYLEQYKKRGSETCGGC-CVM 244
            QS + N+ P  ST   L G      KPT I  G+LRFL+MDAPR  NL  Y+R  K  NVT +VRVCE TY+ +E+  AGI +++MAY+DG SPP  V+  W  LV++  +  S                                                             VHCVAGLGRAPVLVA+AL+E+   + +  V  IR  RRGAIN  QL YLE+Y+ R     GGC CV+
Sbjct:    3 QSKNGNASP-ASTGQTLPGGMTISSKPTLIETGRLRFLIMDAPRQQNLHLYIRECKRMNVTDIVRVCEATYHASELTNAGITLHEMAYEDGHSPPESVLNSWFDLVEDRFLGSSSDKD----------------------------------------------------QRTIAVHCVAGLGRAPVLVAIALMEYEGKEAADAVVMIRKSRRGAINENQLRYLEEYRCRRRGASGGCGCVI 191

[Close]

BLAST of NO05G00900 vs. NCBI_GenBank
Match: XP_002998927.1 (protein tyrosine phosphatase type IVA protein 1 [Phytophthora infestans T30-4] >EEY69073.1 protein tyrosine phosphatase type IVA protein 1 [Phytophthora infestans T30-4])

HSP 1 Score: 143.7 bits (361), Expect = 7.700e-31
Identity = 86/205 (41.95%), Postives = 108/205 (52.68%), Query Frame = 0

Query:   28 KPTFIVWGKLRFLLMDAPRDSNLAQYLRVAKHYNVTALVRVCEPTYNVAEVEAAGIQMYDMAYDDGCSPPPEVIERWLALVDEVLIKPSRRSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHCVAGLGRAPVLVALALIEHGFGDPSAVVEYIRSQRRGAINMRQLNYLEQYKKR 233
            KPT + W  L F++MDAP DSNL  YL+  K +NVT LVR CE TY+   VEAAGI ++++ + DG SP PE++++WL LV E   K +   S                                                         VHCVAGLGRAPVLVA+ALIE+G  DP   VE+IR  RRGAIN+RQL YLE+Y+ R
Sbjct:    7 KPTMVKWEHLSFVIMDAPNDSNLHIYLKELKKHNVTELVRACEVTYSSESVEAAGIHVHELEFPDGESPDPEILDQWLDLV-ETCFKDNSIDS--------------------------------------------------KNNKSIAVHCVAGLGRAPVLVAIALIEYGL-DPINAVEHIRKFRRGAINLRQLKYLEKYQPR 159

[Close]

BLAST of NO05G00900 vs. NCBI_GenBank
Match: XP_009539147.1 (hypothetical protein PHYSODRAFT_356206 [Phytophthora sojae] >EGZ05616.1 hypothetical protein PHYSODRAFT_356206 [Phytophthora sojae])

HSP 1 Score: 143.3 bits (360), Expect = 1.000e-30
Identity = 84/205 (40.98%), Postives = 108/205 (52.68%), Query Frame = 0

Query:   28 KPTFIVWGKLRFLLMDAPRDSNLAQYLRVAKHYNVTALVRVCEPTYNVAEVEAAGIQMYDMAYDDGCSPPPEVIERWLALVDEVLIKPSRRSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHCVAGLGRAPVLVALALIEHGFGDPSAVVEYIRSQRRGAINMRQLNYLEQYKKR 233
            KPT + W  L F++MDAP DSNL  YL+  K +NVT LVR CE TY+   VEAAGI ++++ + DG SP PE++++WL LV++     +  S                                                          VHCVAGLGRAPVLVA+ALIE+G  DP   VE+IR  RRGAIN+RQL YLE+Y+ R
Sbjct:    7 KPTMVKWEHLSFVIMDAPNDSNLHIYLKELKKHNVTDLVRACEVTYSSESVEAAGIHVHELEFPDGESPDPEILDQWLDLVEDCFKDNAIDSK---------------------------------------------------NNKSIAVHCVAGLGRAPVLVAIALIEYGL-DPINAVEHIRKFRRGAINLRQLKYLEKYQPR 159

[Close]

BLAST of NO05G00900 vs. NCBI_GenBank
Match: XP_008914128.1 (hypothetical protein PPTG_17837 [Phytophthora parasitica INRA-310] >ETI33265.1 hypothetical protein F443_20048 [Phytophthora parasitica P1569] >ETK73590.1 hypothetical protein L915_19499 [Phytophthora parasitica] >ETL27021.1 hypothetical protein L916_19392 [Phytophthora parasitica] >ETL80262.1 hypothetical protein L917_19234 [Phytophthora parasitica] >ETM33508.1 hypothetical protein L914_19272 [Phytophthora parasitica] >ETN00629.1 hypothetical protein PPTG_17837 [Phytophthora parasitica INRA-310] >ETO62000.1 hypothetical protein F444_20057 [Phytophthora parasitica P1976] >ETP03076.1 hypothetical protein F441_19922 [Phytophthora parasitica CJ01A1] >ETP31255.1 hypothetical protein F442_19862 [Phytophthora parasitica P10297] >KUF78953.1 protein tyrosine phosphatase type IVA A [Phytophthora nicotianae] >KUF86616.1 Tubulin-specific chaperone C [Phytophthora nicotianae])

HSP 1 Score: 143.3 bits (360), Expect = 1.000e-30
Identity = 86/205 (41.95%), Postives = 108/205 (52.68%), Query Frame = 0

Query:   28 KPTFIVWGKLRFLLMDAPRDSNLAQYLRVAKHYNVTALVRVCEPTYNVAEVEAAGIQMYDMAYDDGCSPPPEVIERWLALVDEVLIKPSRRSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHCVAGLGRAPVLVALALIEHGFGDPSAVVEYIRSQRRGAINMRQLNYLEQYKKR 233
            KPT + W  L F++MDAP DSNL  YL+  K +NVT LVR CE TY+   VEAAGI ++++ + DG SP PE++++WL LV E   K +   S                                                         VHCVAGLGRAPVLVA+ALIE+G  DP   VE+IR  RRGAIN+RQL YLE+Y+ R
Sbjct:    7 KPTMVKWEHLSFVIMDAPNDSNLHIYLKELKKHNVTDLVRACEVTYSSESVEAAGIHVHELEFPDGESPDPEILDQWLDLV-ETCFKDNAIDS--------------------------------------------------KNNKSIAVHCVAGLGRAPVLVAIALIEYGL-DPINAVEHIRKFRRGAINLRQLKYLEKYQPR 159

[Close]

BLAST of NO05G00900 vs. NCBI_GenBank
Match: XP_002182451.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC46352.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 143.3 bits (360), Expect = 1.000e-30
Identity = 83/218 (38.07%), Postives = 112/218 (51.38%), Query Frame = 0

Query:   29 PTFIVWGKLRFLLMDAPRDSNLAQYLRVAKHYNVTALVRVCEPTYNVAEVEAAGIQMYDMAYDDGCSPPPEVIERWLALVDEVLIKPSRRSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHCVAGLGRAPVLVALALIEHGFGDPSAVVEYIRSQRRGAINMRQLNYLEQYKK---RGSETCGGCCVM 244
            PT IV   ++FL+MDAPR  NL  Y++  + Y+VT +VRVCEPTY   E+  AGI ++++ Y DG SPP ++I+ WL LV++     +++S+                                                         VHCVAGLGRAPV+VA+ALIE    DP   V +IR +RRGAIN +QL YLE YKK   RG+     CCV+
Sbjct:    1 PTLIVVKPMQFLIMDAPRQGNLHVYIKEMRKYHVTDVVRVCEPTYQGGELSNAGISLHELEYKDGTSPPKDLIDTWLQLVEKTFYGKTQQSN------------------------------------------------GDSTSNCIAVHCVAGLGRAPVMVAIALIEFASMDPVEAVTFIRQRRRGAINEKQLLYLEGYKKQYRRGAGPEASCCVI 170

[Close]

BLAST of NO05G00900 vs. NCBI_GenBank
Match: OQR96708.1 (protein tyrosine phosphatase type IVA protein 1 [Achlya hypogyna])

HSP 1 Score: 142.5 bits (358), Expect = 1.700e-30
Identity = 81/202 (40.10%), Postives = 109/202 (53.96%), Query Frame = 0

Query:   28 KPTFIVWGKLRFLLMDAPRDSNLAQYLRVAKHYNVTALVRVCEPTYNVAEVEAAGIQMYDMAYDDGCSPPPEVIERWLALVDEVLIKPSRRSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHCVAGLGRAPVLVALALIEHGFGDPSAVVEYIRSQRRGAINMRQLNYLEQY 230
            KP+ + + +L FL++DAP DSNL  YL+  K Y VT +VR CEPTY+ A VEAAG ++++M + DG  P  E+I++WLALV++ +   +R ++                                                         VHCVAGLGRAPVLVA+AL+EHG  D    VE+IR  RRGAIN+RQL YLE+Y
Sbjct:    7 KPSHVQYDQLSFLILDAPNDSNLPLYLKEFKKYQVTDIVRACEPTYSDATVEAAGFRVHEMEFPDGEPPSQEIIQKWLALVEQTMKDNARDNA-----------------------------------------------GTHQSDKTVAVHCVAGLGRAPVLVAIALMEHGL-DVITAVEHIRKARRGAINLRQLKYLEKY 160

The following BLAST results are available for this feature:

BLAST of NO05G00900 vs. NCBI_GenBank

BLAST of NO05G00900 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
XP_005853694.1	3.100e-64	56.38	protein tyrosine phosphatase type iva protein 1 [N...	[more]
CBJ29450.1	4.000e-35	40.54	protein tyrosine phosphatase [Ectocarpus siliculos...	[more]
GAY03021.1	1.200e-31	41.20	protein tyrosine phosphatase type IVA protein 1 [P...	[more]
POM78988.1	2.600e-31	42.44	Protein tyrosine phosphatase type IVA protein 1 [P...	[more]
EJK58019.1	4.500e-31	38.43	hypothetical protein THAOC_21893 [Thalassiosira oc...	[more]
XP_002998927.1	7.700e-31	41.95	protein tyrosine phosphatase type IVA protein 1 [P...	[more]
XP_009539147.1	1.000e-30	40.98	hypothetical protein PHYSODRAFT_356206 [Phytophtho...	[more]
XP_008914128.1	1.000e-30	41.95	hypothetical protein PPTG_17837 [Phytophthora para...	[more]
XP_002182451.1	1.000e-30	38.07	predicted protein, partial [Phaeodactylum tricornu...	[more]
OQR96708.1	1.700e-30	40.10	protein tyrosine phosphatase type IVA protein 1 [A...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL087	nonsL087	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
nonsL086	nonsL086	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
nonsL084	nonsL084	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR092	ncniR092	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR122	ngnoR122	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR119	ngnoR119	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR118	ngnoR118	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK003778	NSK003778	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO05G00900.1	NO05G00900.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|583676	gene_2881	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
PTP	gene2278	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO05G00900.1	NO05G00900.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO05G00900 ID=NO05G00900|Name=NO05G00900|organism=Nannochloropsis oceanica|type=gene|length=1418bp
ACCACAGGCCTTCAAACAGTCACGCAACCCGCCACGTACCAAACGTCAGC
CCTGGCGGCCTTTAGTAGAGGTGTGTGTGAGTGGACGAAGGAGAGTGCTC
CTCCTTCCTCCCGCCCACCTTAGCACCCTGGACGCGTCCGATCTCACCCG
AGCAGCAGCAGGCGCAGCCGCAGGCGCAGCAGCACCGAGTGCAGCAGCAC
CATCTCTGCAAGGAAGACTGAATCGCCAAGGCGTGCACGAATTCCCGCCT
TCTCCCTTCGACTATACCTCTATAACCGCGACCTCCACGTCAACCACGCA
TCAGGATGGCTCCTCCGCAGACATCCTCCCAATCCCTCCACTCCAACTCC
TTTCCCTACACCTCCACCACCGCCGTCCTGGCCGGCAAACCCACCTTTAT
CGTGTGGGGGAAACTCCGATTTCTTCTCATGGATGCCCCGCGCGATAGCA
ATTTGGCGCAATACTTGCGTGTAGCCAAGCACTACAATGTGACGGCTTTG
GTGCGTGTCTGCGAGCCGACATACAACGTAGCGGAGGTAGAGGCGGCAGG
TATTCAGATGTATGACATGGCATATGATGATGGGTGCAGTCCTCCTCCAG
AGGTTATTGAGAGGTGGCTTGCTCTCGTAGACGAGGTGTTGATTAAGCCC
TCTCGTCGCTCCTCCCTCTCCTACTCCAATGGTAATGGTAGTGGATCCAC
TACTACCAGCACACCTACCTCCCGCGACTCCTCCTCTGCCACCATTCCCG
CCATTATGGCCTCTCCCATTGAATCCCAGCAAGAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCTTCCTCCTCCCGCGATCGCCGTGCATTGTGTGGC
AGGACTGGGCCGCGCGCCTGTCCTCGTCGCCCTGGCTTTGATTGAACATG
GGTTCGGCGACCCTTCGGCGGTGGTGGAATATATTCGGTCGCAGCGACGA
GGGGCGATTAACATGCGGCAATTGAATTATCTGGAGCAATACAAGAAGAG
GGGGTCGGAGACGTGTGGGGGATGCTGTGTCATGTGAATTGACTCCAAGA
GAGGGGGAGAAAGAAAGAGAGGAGGGGGGGAAAGGCGGCCTTTTTTGAGA
GGAAGGAAAGACGTTAGTTTTGATGCAGAGAGAGGAAAGAAAACTCAGTG
GGTTGTGGAGGGTGCTCTCTTTTGAGGTATGGCGAGCGCATATATTGAGT
CGATTAATCCATATCCATGAGTGGAGGTGTGGGTGTATGGTGCTGCTGCT
GCTGGTGCTGGTACGTACAAGATCAAGCATAAAGAGACAGTACACATAAT
CATGTATGAGAGGTGGAGATAGCTAATTTCGGTGCATTCTAGTCTCACCT
GAGGTTTCCAAATTGAATAGGAACAAGGGCAACGGAAAAAGCAAGCATAG
AGAGAGGGGAAGAAGTTT

protein sequence of NO05G00900.1

>NO05G00900.1-protein ID=NO05G00900.1-protein|Name=NO05G00900.1|organism=Nannochloropsis oceanica|type=polypeptide|length=244bp
MAPPQTSSQSLHSNSFPYTSTTAVLAGKPTFIVWGKLRFLLMDAPRDSNL
AQYLRVAKHYNVTALVRVCEPTYNVAEVEAAGIQMYDMAYDDGCSPPPEV
IERWLALVDEVLIKPSRRSSLSYSNGNGSGSTTTSTPTSRDSSSATIPAI
MASPIESQQEQQQQQQQQQQLPPPAIAVHCVAGLGRAPVLVALALIEHGF
GDPSAVVEYIRSQRRGAINMRQLNYLEQYKKRGSETCGGCCVM*

Synonyms

Publications