PTP, gene2278 (gene) Nannochloropsis gaditana

Overview
NamePTP
Unique Namegene2278
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:257575..259422 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100004g15
Gene biotypeprotein_coding
GenePTP
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:257575..259422 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL122ngnoL122Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL119ngnoL119Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL118ngnoL118Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G00900NO05G00900Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2384rna2384-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2384rna2384Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2384

>rna2384-protein ID=rna2384-protein|Name=rna2384|organism=Nannochloropsis gaditana|type=polypeptide|length=238bp
MAPPQSAPKHFYSSVPQTSAMAVLAGKPTFLAWGKLRFLLMDAPRDCNLS
HYIREAKRHNVIALVRVCEPTYDTEEVEAAGIQVLDMGYDDGSSPPQDVI
DRWLALVDDVFSKPARLTPSLSPAASYPGIQSGKSGVALARSMSWRENSH
QGAAAASPQELEESEEPAPTIAVHCVAGLGRAPVLVALALIEHGFGDASA
VVEFIRSKRRGAINMRQLNYLEQYQKREAVSCGGCSIM
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Synonyms
Publications