NO04G05190, NO04G05190 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G05190 vs. NCBI_GenBank
Match: EWM28912.1 (hypothetical protein Naga_100869g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 359.4 bits (921), Expect = 1.300e-95 Identity = 158/220 (71.82%), Postives = 179/220 (81.36%), Query Frame = 0 Query: 63 MPDMDPPVNAIEEQIALHGHALPAQTCKGSFEDGFAGWTSLEGARNESIVLVSTPVRAGKQAARVTVNPGEMTHHGNRAEITHNLEDAPGTVGWYAWSVLIPLSYPTDEDPTRNWQIICQWHDQPDLDAGQSWDGFPPHNSSIALYLLNHPNRTSLAMGVGFNLPKGTWQYGPVVIEKGEWVDVLFHIGWSTGDDGFIHTFIEGGKERGREMQALTPPEG 283 MPDMDPPV++IEEQIALHG LPA T GSFEDGF GWTSLEGA+ +SIVLVS+PVR G Q+ R+ V PG+ HGNRAEITHNLED+PGT GWYAWS+ IP YPT DPTR WQI+CQWHDQPDLDAGQSWD FPPHNSSIALYLLN+P TS+ +GVG NLPKGTWQYGP +EKGEW+D+LFHIGWSTG DGF++ +E G R+ Q LTP G Sbjct: 115 MPDMDPPVDSIEEQIALHGRPLPASTFVGSFEDGFEGWTSLEGAQEDSIVLVSSPVRTGNQSVRIRVRPGDYIQHGNRAEITHNLEDSPGTEGWYAWSLYIPRDYPTVADPTRQWQILCQWHDQPDLDAGQSWDAFPPHNSSIALYLLNYPENTSIGLGVGTNLPKGTWQYGPARVEKGEWIDILFHIGWSTGQDGFVNASVETGGLETRQTQVLTPLGG 334
BLAST of NO04G05190 vs. NCBI_GenBank
Match: OHD53794.1 (hypothetical protein A2Y33_02765 [Spirochaetes bacterium GWF1_51_8]) HSP 1 Score: 134.0 bits (336), Expect = 8.900e-28 Identity = 81/234 (34.62%), Postives = 116/234 (49.57%), Query Frame = 0 Query: 93 FEDGFAGWTSLEGARNESIVLVSTPVRAGKQAARVTVNPGEMTHHGNRAEITHNLEDAPGTVGWYAWSVLIPLSYPTDEDPTRNWQIICQWHDQPDLDAGQSWDGFPPHNSSIALYLLNHPNRTSLAMGVGFNLPKGTWQYGPVVIEKGEWVDVLFHIGWSTGDDGFIHTFIEGGKERGREMQALTPPEGVRGRTLFYQYTDYLKLGLYREPSINYTSTLYLDELRCGPTKESV 327 FEDG G LE R I +V+ PVR G A + T+ PG GNR E+ + D G +Y WS ++ Y TD WQII QWHDQPD A +SW FP ++ +++ + NR L + K W+YG V + G+W DV H+ WS DGF+ +I G PE + T+ + +YLK+GLYR+ + ++ +Y D ++ G T V Sbjct: 37 FEDGTTGVWGLEQGRPGLIAVVTNPVRTGTYAVKFTILPGVTWGSGNRTEMKYFNIDPYGEEVYYGWSCMLAPGY-TDNG---LWQIIGQWHDQPDPFADESWSSFPKNSPPLSINYTS--NRVYLVVIHSGIKNKTMWEYG-VPVGYGQWFDVAVHVKWSMLSDGFVEAWINGTN---------LYPERIYCPTVVNRIGNYLKIGLYRDENAQGSNVVYYDNVKIGKTLTEV 254
BLAST of NO04G05190 vs. NCBI_GenBank
Match: OGY92001.1 (hypothetical protein A3B31_03345 [Candidatus Komeilibacteria bacterium RIFCSPLOWO2_01_FULL_53_11]) HSP 1 Score: 133.3 bits (334), Expect = 1.500e-27 Identity = 87/259 (33.59%), Postives = 134/259 (51.74%), Query Frame = 0 Query: 93 FEDG--FAGWTS--LEGAR----NESIVLVSTPVRAGKQAARVTVNPGEMTHHGN------RAEI-----------THNLEDAPGTVGWYAWSVLIPLSYPTDEDPTRNWQIICQWHDQPDLDAGQSWDGFPPHNSSIALYLLNHPNRTSLAMGVGFNLPKGTWQYGPVVIEKGEWVDVLFHIGWSTGDDGFIHTFIEGGKERGREMQALTPPEGVRGRTLFYQYTDYLKLGLYREPSINYTSTLYLDELRCGPTKESV 327 FE+G GWTS L GA+ ++SI +V+ PVR G A +VTV G+ + G+ RAE+ T E GT WYAWS+LIP Y D +WQI+ QWHDQP + G+S G+ P I+++ + ++S G G I++G+W++++FHIG+S G DGF+ + +G + + A + G +F +YL++GLYR T+TLY DE++ T+E++ Sbjct: 89 FENGALSPGWTSLALHGAKRIEDSDSIQIVTDPVRKGTHALKVTVRDGDWVYFGDRLNDKERAELIRQNSCRQGTCTFGNEGREGTELWYAWSILIPEDYQYDR-VGHDWQIMGQWHDQP--EPGESPSGYSP---PISVHYRSTGGQSSFVFTYGLRQTGGPITEVEAPIKRGKWINLMFHIGFSQGKDGFLEVWKDGVPVKTDQGIA-----RITGPNMFNAEPNYLRIGLYRGVGQKQTNTLYYDEIKIATTREAL 336
BLAST of NO04G05190 vs. NCBI_GenBank
Match: OHD53308.1 (hypothetical protein A2014_06180 [Spirochaetes bacterium GWF1_49_6]) HSP 1 Score: 124.4 bits (311), Expect = 7.100e-25 Identity = 77/236 (32.63%), Postives = 112/236 (47.46%), Query Frame = 0 Query: 93 FEDGFAGWTSLEGARNESIVLVSTPVRAGKQAARVTVNPGEMTHHGNRAEITHNLEDAPGTVGWYAWSVLIPLSYPTDEDPTRNWQIICQWHDQPDLDAGQSWDGFPPHNSSIAL-YLLNHPNRTSLAMGVGFNLPKGTWQYGPVVIEKGEWVDVLFHIGWSTGDDGFIHTFIEGGKERGREMQALTPPEGVRGRTLFYQYTDYLKLGLYREPSINYTSTLYLDELRCGPTKESVA 328 FEDG G +LE I + S VR G A + T+ P H GNR E+ + D +Y WS ++ Y TD WQII QWHDQPD + SW FP ++ I++ Y+ N L G+ + W+ G + G W DV+ H+ WS DGF+ ++ G PE + +T+ + +YLK+GLYR+ T+ +Y DE++ G T A Sbjct: 35 FEDGTTGVWNLEQGLPGLIEVQSNLVRTGNYAVKFTILPNVTWHTGNRTEMAYFNMDPYVEEVYYGWSCMLAPGY-TDNG---KWQIIGQWHDQPDPFSNDSWSSFPRNSPPISINYISNKVYLNILYSGIQSRI---MWENG-ATVSYGVWFDVVVHVKWSMYGDGFVEGWVNGTN---------LYPERIYSKTVVNRVGNYLKIGLYRDEDAIGTNIVYYDEVKIGKTYAEAA 253
BLAST of NO04G05190 vs. NCBI_GenBank
Match: PIR87528.1 (hypothetical protein COU10_04160 [Candidatus Harrisonbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_45_28]) HSP 1 Score: 120.9 bits (302), Expect = 7.800e-24 Identity = 85/271 (31.37%), Postives = 124/271 (45.76%), Query Frame = 0 Query: 81 GHALPAQTCKGSFEDGFAGWTSLEGARNESIVLVSTPVRAGKQAARVTVNPGEMTHHGNRAEITHNLEDAPGTVGWYAWSVLIPLSYP----TDEDPTRNWQIICQWHDQPDLDAGQSWDGFPPHNSSIAL----YLLNHPN-RTSLAMGVG----------FNLPKGTWQYG----PVV---IEKGEWVDVLFHIGWSTGDDGFIHTFIEGGKERGREMQALTPPEGVRGRTLFYQYTDYLKLGLYREPSINYTSTLYLDELRCGPTKES 326 G+ L A +G F D + G S E E + VS G AA+ TV G++ +RAE+ + +A G Y W+V IP +Y +D NWQ+I QWHDQPD+ G++WD +P H+ S+AL N P + +A G+G N P + YG P+ I+KG W V H+ WS + GF I G G + G + + Y K GLYR I YT++++ D +R K++ Sbjct: 66 GYTLRADFEEGVFPDAWKG--SYEIVNLERALAVSPDAEKGTYAAKFTVASGDLIKGKSRAELAWDNHNAEGVEELYLWNVKIPENYQDVPLIAKDGRPNWQVIGQWHDQPDVTKGETWDSYPAHSPSLALNYGFLTQNDPEYKRIIASGIGDSIVGFSPDYDNQPMISVTYGTPPQPIALYPIQKGVWNTVTAHVLWSQTEKGFAEVSINGMSVTGGKH---------FGVNKYNAASAYFKFGLYRHEDIPYTNSIFYDNVRIERVKQN 325
BLAST of NO04G05190 vs. NCBI_GenBank
Match: WP_027421373.1 (hypothetical protein [Crocinitomix catalasitica]) HSP 1 Score: 114.8 bits (286), Expect = 5.600e-22 Identity = 79/265 (29.81%), Postives = 124/265 (46.79%), Query Frame = 0 Query: 85 PAQTCKGSFEDGFAGWTSLEGA--RNE-SIVLVSTPVR-AGKQAARVTVNPGEMTHHGNRAEITHNLEDAPGTVGWYAWSVLIPLSYP----TDEDPTRNWQIICQWHDQPDLDAGQSWDGFPPHNSS--IALYLLNHPNRTSLAMGVGFNLPKGTWQYG-----------PVV----------IEKGEWVDVLFHIGWSTGDDGFIHTFIEGGKERGREMQALTPPEGVRGRTLFYQYTDYLKLGLYREPSINYTSTLYLDELR 319 P Q FE W + G RN+ V++ST + G+Q+ + T++P + GNRAE+T + + G WY +S IP+ Y D + NWQ++ QWH QP D G+ W + N+S I +Y NH + T + + P+ T YG +V I KGEW + F+I W+ + G I +++G ALT + V G+ + + Y K G+YR P+I Y + LY D+++ Sbjct: 30 PLQDINFGFETVLEDWVAYGGGGERNDPDDVMISTDTKIEGEQSCKFTISPESIVAGGNRAELTFDQKAIEGDDTWYEYSFYIPVDYEDVDLRDAEDRVNWQVLGQWHHQPVFDDGEDWIDYTGKNASPPIGIY-YNHFDTTDIHYKNILSDPEATSVYGFNPDWHDVSTISIVYGGKSIAIREITKGEWHRLKFNILWAENNSGTIQVWLDG--------TALTDGK-VSGKNMLNSSSHYFKFGIYRNPTIPYVNHLYYDDVK 284
BLAST of NO04G05190 vs. NCBI_GenBank
Match: OHD19619.1 (hypothetical protein A2Y37_07415 [Spirochaetes bacterium GWB1_60_80] >OHD34682.1 hypothetical protein A2004_01415 [Spirochaetes bacterium GWC1_61_12] >OHD59223.1 hypothetical protein A2Y32_00380 [Spirochaetes bacterium GWF1_60_12]) HSP 1 Score: 112.8 bits (281), Expect = 2.100e-21 Identity = 61/178 (34.27%), Postives = 90/178 (50.56%), Query Frame = 0 Query: 152 GTVGWYAWSVLIPLSYPTDEDPTRNWQIICQWHDQPDLDAGQSWDGFPPHNSSIALYLLNHPNRTSLAMGVGFNLPKGTWQYGPVVIEKGEWVDVLFHIGWSTGDDGFIHTFIEGGKERGREMQALTPPEGV---RGRTLFYQYTDYLKLGLYREPSINYTSTLYLDELRCGPTKESV 327 GT +Y+W + I Y D WQ+I Q+HDQPDL G+SW+G+P ++ +A L + V G + KG W ++ H+ WSTGDDGFI +++ + P+G+ R R F Q +YLK+GLYR SI +T+Y D ++ GP+ SV Sbjct: 100 GTEVYYSWHIKIDADYAESAD----WQVIGQFHDQPDLALGESWNGYPANSPPLAFKY----REGQLVVAVYSWETAGVMDIALAPLSKGVWHELTTHVRWSTGDDGFIEAWLDD--------VPIVSPDGITRYRARNCFNQAGNYLKIGLYRSTSILTEATVYYDRIKSGPSWASV 261
BLAST of NO04G05190 vs. NCBI_GenBank
Match: OHD34968.1 (hypothetical protein A2087_09870 [Spirochaetes bacterium GWD1_61_31] >OHD42420.1 hypothetical protein A2Y35_06200 [Spirochaetes bacterium GWE1_60_18]) HSP 1 Score: 112.8 bits (281), Expect = 2.100e-21 Identity = 61/178 (34.27%), Postives = 90/178 (50.56%), Query Frame = 0 Query: 152 GTVGWYAWSVLIPLSYPTDEDPTRNWQIICQWHDQPDLDAGQSWDGFPPHNSSIALYLLNHPNRTSLAMGVGFNLPKGTWQYGPVVIEKGEWVDVLFHIGWSTGDDGFIHTFIEGGKERGREMQALTPPEGV---RGRTLFYQYTDYLKLGLYREPSINYTSTLYLDELRCGPTKESV 327 GT +Y+W + I Y D WQ+I Q+HDQPDL G+SW+G+P ++ +A L + V G + KG W ++ H+ WSTGDDGFI +++ + P+G+ R R F Q +YLK+GLYR SI +T+Y D ++ GP+ SV Sbjct: 93 GTEVYYSWHIKIDADYAESAD----WQVIGQFHDQPDLALGESWNGYPANSPPLAFKY----REGQLVVAVYSWETAGVMDIALAPLSKGVWHELTTHVRWSTGDDGFIEAWLDD--------VPIVSPDGITRYRARNCFNQAGNYLKIGLYRSTSILTEATVYYDRIKSGPSWASV 254
BLAST of NO04G05190 vs. NCBI_GenBank
Match: WP_044183111.1 (carbohydrate-binding protein [Hyalangium minutum] >KFE71304.1 hypothetical protein DB31_3434 [Hyalangium minutum]) HSP 1 Score: 110.2 bits (274), Expect = 1.400e-20 Identity = 77/245 (31.43%), Postives = 116/245 (47.35%), Query Frame = 0 Query: 90 KGSFEDG-FAGWTSLEGARNESIVLVSTPVRAGKQAARVTVNPGE--MTHHGNRAEITHNLEDAPGTVGWYAWSVLIPLSYPTDEDPTRNWQIICQWHDQPDLDAGQSWDGFPPHNSSIALYLLNHPNRTSLAMGVGFNLPKGTWQYGPVVIEKGEWVDVLFHIGWSTG-DDGFIHTFIEGGKERGREMQALTPPEGVRGRTLFYQYTDYLKLGLYREPSINYTSTLYLDELRCGPTKESVALPP 331 KG FE G + WT + ++ + +VS R G +A +VTV G+ + GNR E+ + E+A G+ +Y WS L P +YP WQ+ QWH + G PP + Y++ + + G + K W GP+V +G+W D + H+ WS+ GF+ + + GK + A T G R +YLKLGLYR+ SI+ +Y D G T E V +PP Sbjct: 24 KGDFETGDLSQWTRAQSVADDRLQIVSDVTREGSKALKVTVRQGDNPIAASGNRNEVLYLTEEAQGSEYYYKWSTLFPANYPI----ANTWQLFAQWHQ-------EGCCGSPP----LEFYVVGE----EMFLRAGGSEGKIIWS-GPLV--RGQWNDFVLHVKWSSNPSTGFVELY-KDGKLAAPKTYAATQFSGDR---------NYLKLGLYRDNSISQVGVVYHDGFAMGTTLEDV-MPP 235
BLAST of NO04G05190 vs. NCBI_GenBank
Match: WP_075010191.1 (carbohydrate-binding protein [Stigmatella aurantiaca] >SEM78902.1 Myxococcales GC_trans_RRR domain-containing protein [Stigmatella aurantiaca]) HSP 1 Score: 100.5 bits (249), Expect = 1.100e-17 Identity = 73/248 (29.44%), Postives = 115/248 (46.37%), Query Frame = 0 Query: 83 ALPAQTCKGSFEDG-FAGWTSLEGARNESIVLVSTPVRAGKQAARVTVNPGE--MTHHGNRAEITHNLEDAPGTVGWYAWSVLIPLSYPTDEDPTRNWQIICQWHDQPDLDAGQSWDGFPPHNSSIALYLLNHPNRTSLAMGVGFNLPKGTWQYGPVVIEKGEWVDVLFHIGWST-GDDGFIHTFIEGGKERGREMQALTPPEGVRGRTLFYQYTDYLKLGLYREPSINYTSTLYLDELRCGPTKESV 327 A A KG FE G + W+ L+ ++ + +V+ VR G+ A +VTV G+ + GNR E+ + + T +Y WS L P +YP+ + WQ+ QWH G PP + Y++ R + VG + + W+ +++ W D + H+ WS+ GF+ + +G + M A T F + +YLKLGLYR+ SI+ T+TLY D G T V Sbjct: 5 ASAATLWKGDFETGNHSQWSRLQSVASDRLQVVTDVVREGRYALKVTVKKGDDPINASGNRNELLYLSHETTNTDYFYKWSTLFPKNYPSAD----KWQVFAQWHQ-------NGCCGSPP----LEFYVVGEEMR----LRVGGSSGRIVWK---APLKREVWNDFVMHVKWSSDAKVGFVELYKDGKLVLPKTMAA----------TQFGKEKNYLKLGLYRDESISPTATLYHDGFVMGTTLADV 220 The following BLAST results are available for this feature:
BLAST of NO04G05190 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G05190 ID=NO04G05190|Name=NO04G05190|organism=Nannochloropsis oceanica|type=gene|length=2617bpback to top protein sequence of NO04G05190.1 >NO04G05190.1-protein ID=NO04G05190.1-protein|Name=NO04G05190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=356bpback to top Synonyms
Publications
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