jgi.p|Nanoce1779_2|579888, gene_2308 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|579888
Unique Namegene_2308
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:1359704..1362214 -

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Properties
Property NameValue
TranscriptId579974
ProteinId579888
Product namePolysaccharide lyase-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:1359704..1362214 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL058ncniL058Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G05190NO04G05190Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|579888mRNA_2308-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|579888mRNA_2308Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|579888

>mRNA_2308-protein ID=mRNA_2308-protein|Name=jgi.p|Nanoce1779_2|579888|organism=Nannochloropsis oceanica|type=polypeptide|length=294bp
MPDMDPPVNAIEEQIALHGHALPAQTCKGSFEDGFAGWTSLEGARNESIV
LVSTPVRAGKQAARVTVNPGEMTHHGNRAEITHNLEDAPGTVGWYAWSVL
IPLSYPTDEDPTRNWQIICQWHDQPDLDAGQSWDGFPPHNSSIALYLLNH
PNRTSLAMGVGFNLPKGTWQYGPVVIEKGEWVDVLFHIGWSTGDDGFIHT
FIEGGKERGREMQALTPPEGVRGRTLFYQYTDYLKLGLYREPSINYTSTL
YLDELRCGPTKESVALPPLLEAGEREGGGRGRRGKFRTRVLGG*
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Synonyms
Publications