NO04G04980, NO04G04980 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G04980 vs. NCBI_GenBank
Match: EWM28890.1 (phosphoserine phosphatase [Nannochloropsis gaditana]) HSP 1 Score: 372.1 bits (954), Expect = 1.500e-99 Identity = 185/268 (69.03%), Postives = 216/268 (80.60%), Query Frame = 0
Query: 10 LARGAQGSTVATALRGGAAWCFVP---WSCSTHHRTRLPVRPLRAHISTHKGLAPQKAKDILKKAQAVCFDVDSTVCAEEGIDVLAEFLGQGQAVADLTAKAMGGTVLFQDALQGRLDLIKPSRAHFADCIAKHPATLSNGVKQFIDILHKRGTAVYLVSGGFRLMIEPVADRLSIPHHRIYANTVLFKEDGTYKGFDPQEPTSRDGGKPAVVKSLKERFGYVDVVMIGDGATDMQARPPADAFVGYGGVTVRENVAKGADWFVYNFQ 275
L + A +T T+L+ + F+P R R RP++A ST++GL P +AKD+LKKAQAVCFDVDSTVCAEEGIDVLA FLGQGQAVADLTAKAMGG+VLFQDAL+GRLDLIKPSRA +C+ +HPATLS GVK+F+ L RGTAVYLVSGGFRLMIEPVADRL +P RIYANT+LF E+G+YK FDP EPTSRDGGK AV+KSLKE+ GY DV+M+GDGATDMQARPPADAF+GYGGV VR+ V +GADWFV +FQ
Sbjct: 11 LTKQAWQTTSGTSLKMTVSLAFIPAFNIHVGAFSRVRYSSRPVKAGFSTYQGLDPDRAKDVLKKAQAVCFDVDSTVCAEEGIDVLAAFLGQGQAVADLTAKAMGGSVLFQDALKGRLDLIKPSRADIQNCLLRHPATLSPGVKEFVGRLQARGTAVYLVSGGFRLMIEPVADRLLVPRDRIYANTLLFAENGSYKDFDPNEPTSRDGGKAAVIKSLKEKHGYQDVLMVGDGATDMQARPPADAFIGYGGVVVRDPVLQGADWFVRSFQ 278
BLAST of NO04G04980 vs. NCBI_GenBank
Match: EWM28889.1 (phosphoserine phosphatase [Nannochloropsis gaditana]) HSP 1 Score: 370.2 bits (949), Expect = 5.900e-99 Identity = 183/268 (68.28%), Postives = 215/268 (80.22%), Query Frame = 0
Query: 10 LARGAQGSTVATALRGGAAWCFVP---WSCSTHHRTRLPVRPLRAHISTHKGLAPQKAKDILKKAQAVCFDVDSTVCAEEGIDVLAEFLGQGQAVADLTAKAMGGTVLFQDALQGRLDLIKPSRAHFADCIAKHPATLSNGVKQFIDILHKRGTAVYLVSGGFRLMIEPVADRLSIPHHRIYANTVLFKEDGTYKGFDPQEPTSRDGGKPAVVKSLKERFGYVDVVMIGDGATDMQARPPADAFVGYGGVTVRENVAKGADWFVYNFQ 275
L + A +T T+L+ + F+P R R RP++A ST++GL P +AKD+LKKAQ +CFDVDSTVCAEEGIDVLA FLGQGQAVADLTAKAMGG+VLFQDAL+GRLDLIKPSRA +C+ +HPATLS GVK+F+ L RGTAVYLVSGGFRLMIEPVADRL +P RIYANT+LF E+G+YK FDP EPTSRDGGK AV+KSLKE+ GY DV+M+GDGATDMQARPPADAF+GYGGV VR+ V +GADWFV +FQ
Sbjct: 11 LTKQAWQTTSGTSLKMTVSLAFIPAFNIHVGAFSRVRYSSRPVKAGFSTYQGLDPDRAKDVLKKAQVICFDVDSTVCAEEGIDVLAAFLGQGQAVADLTAKAMGGSVLFQDALKGRLDLIKPSRADIQNCLLRHPATLSPGVKEFVGRLQARGTAVYLVSGGFRLMIEPVADRLLVPRDRIYANTLLFAENGSYKDFDPNEPTSRDGGKAAVIKSLKEKHGYQDVLMVGDGATDMQARPPADAFIGYGGVVVRDPVLQGADWFVRSFQ 278
BLAST of NO04G04980 vs. NCBI_GenBank
Match: CBJ30534.1 (Phosphoserine phosphatase [Ectocarpus siliculosus]) HSP 1 Score: 282.7 bits (722), Expect = 1.200e-72 Identity = 139/232 (59.91%), Postives = 174/232 (75.00%), Query Frame = 0
Query: 57 KGLAPQKAKDILKKAQAVCFDVDSTVCAEEGIDVLAEFLGQGQAVADLTAKAMGGTVLFQDALQGRLDLIKPSRAHFADCIAKHPATLSNGVKQFIDILHKRGTAVYLVSGGFRLMIEPVADRLSIPHHRIYANTVLFKED-------GTYKGFDPQEPTSRDGGKPAVVKSLKERFGYVDVVMIGDGATDMQARPPADAFVGYGGVTVRENVAKGADWFVYNFQELIDVVK 282
+GL + AK L++AQAVCFDVDSTV AEEGIDVLA+F G +AVADLT++AMGG++ FQDAL+ RLDL+ PS+ C+ +HP LS G+ + + LH+RG VYLVSGGFR MI PVAD+LSIP I+AN +LF ++ G Y GFD EPTSRDGGK V+ L + FGY VVM+GDGATDMQA+PPADAF+GYGGVTVR++V KGADWFV +F LI+ ++
Sbjct: 58 EGLDVEGAKAALRRAQAVCFDVDSTVIAEEGIDVLADFCGAAEAVADLTSRAMGGSMPFQDALKARLDLMTPSQKVVDLCLREHPPRLSPGISELVSALHERGVVVYLVSGGFRQMIAPVADQLSIPRGNIFANRLLFGDESSDGATAGAYVGFDTDEPTSRDGGKAKVIDLLSKEFGYKCVVMVGDGATDMQAKPPADAFIGYGGVTVRKSVRKGADWFVTDFGPLIEALR 289
BLAST of NO04G04980 vs. NCBI_GenBank
Match: EJK51772.1 (hypothetical protein THAOC_29029 [Thalassiosira oceanica]) HSP 1 Score: 273.5 bits (698), Expect = 7.500e-70 Identity = 142/262 (54.20%), Postives = 177/262 (67.56%), Query Frame = 0
Query: 18 TVATALRGGAAWCFVPWSCSTHHRTRLPVRPLRAHISTHKGLAPQKAKDILKKAQAVCFDVDSTVCAEEGIDVLAEFLGQGQAVADLTAKAMGGTVLFQDALQGRLDLIKPSRAHFADCIAKHPATLSNGVKQFIDILHKRGTAVYLVSGGFRLMIEPVADRLSIPHHRIYANTVLFKEDGTYKGFDPQEPTSRDGGKPAVVKSLKERFGYVDVVMIGDGATDMQARPPADAFVGYGGVTVRENVAKGADWFVYNFQELIDV 280
++A A + FVP S S R +R + A H+G + A ++L KA AVCFDVDSTV EEGIDVLA+ LG+G VA TAKAMGG V F+DAL RL++I PSR +DC+ +HP LS GV + L +RGT VYLVSGGFRLMIEPVA+ L + IYANT+LF +DG Y GFD EPTS D GKP + +KE GY ++M+GDGATD QA+PPADAF+GYGGV R+ VA ADWFV +F+ +ID+
Sbjct: 104 SLAAAAQHRPITAFVPPSKSV--RAPFVLRTMSA-TQAHEGNNVEHAMEMLAKADAVCFDVDSTVIDEEGIDVLADTLGKGPEVAAWTAKAMGGNVKFEDALAARLEIITPSRKQISDCLEQHPLRLSPGVDTLVTKLQQRGTDVYLVSGGFRLMIEPVAEELGVDVKNIYANTILFDDDGEYAGFDSDEPTSADQGKPKALGQIKEAGGYETMIMVGDGATDAQAKPPADAFIGYGGVVRRDAVAAKADWFVTDFETMIDI 362
BLAST of NO04G04980 vs. NCBI_GenBank
Match: GBG32668.1 (Phosphoserine phosphatase [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 270.0 bits (689), Expect = 8.300e-69 Identity = 133/224 (59.38%), Postives = 163/224 (72.77%), Query Frame = 0
Query: 58 GLAPQKAKDILKKAQAVCFDVDSTVCAEEGIDVLAEFLGQGQAVADLTAKAMGGTVLFQDALQGRLDLIKPSRAHFADCIAKHPATLSNGVKQFIDILHKRGTAVYLVSGGFRLMIEPVADRLSIPHHRIYANTVLFKEDGTYKGFDPQEPTSRDGGKPAVVKSLKERFGYVDVVMIGDGATDMQARPPADAFVGYGGVTVRENVAKGADWFVYNFQELIDVVK 282
G+A ++ + K A+AVCFDVDSTV EEGIDVLAE G G+AVA T KAMGG+V F +AL+ RL+L PS DC KHP L+ G+ I LH+R VYLVSGGFR MI P+AD L+I RIYAN +LFK+DG++ GFDP+EPTSR GGK VV++LKE GY + MIGDGATDM+ARPPADAF+G+GGV VRE V +GADWFV + +LI +K
Sbjct: 26 GMAHEEVVALWKSAKAVCFDVDSTVVTEEGIDVLAEHCGAGEAVAAWTRKAMGGSVPFHEALEARLNLFGPSVKDIQDCNTKHPLELTPGIADLIATLHERNVHVYLVSGGFRQMINPLADILNISRDRIYANNLLFKDDGSFAGFDPEEPTSRAGGKAKVVQTLKEAHGYDPIFMIGDGATDMEARPPADAFIGFGGVAVREVVKEGADWFVTDMNDLIKPLK 249
BLAST of NO04G04980 vs. NCBI_GenBank
Match: XP_009821574.1 (phosphoserine phosphatase SerB [Aphanomyces astaci] >ETV89174.1 phosphoserine phosphatase SerB [Aphanomyces astaci]) HSP 1 Score: 268.5 bits (685), Expect = 2.400e-68 Identity = 135/246 (54.88%), Postives = 166/246 (67.48%), Query Frame = 0
Query: 31 FVPWSCSTHHRTRLPVRPLRAHISTHKGLAPQKAKDILKKAQAVCFDVDSTVCAEEGIDVLAEFLGQGQAVADLTAKAMGGTVLFQDALQGRLDLIKPSRAHFADCIAKHPATLSNGVKQFIDILHKRGTAVYLVSGGFRLMIEPVADRLSIPHHRIYANTVLFKEDGTYKGFDPQEPTSRDGGKPAVVKSLKERFGYVDVVMIGDGATDMQARPPADAFVGYGGVTVRENVAKGADWFVYNFQEL 277
F P +T T +P + + H+ L+ + I ++AQAVCFDVDSTVC+EEGIDVLA GQG+ VA T KAM G V F+DAL RLD+IKPS+ ADC+ HP L+ G++ I LH R VY VSGGFRLMI PVADRL++P I+ANT+ F G Y GFD E TSRDGGKP V+ LK++ GY VVM+GDG TDMQA+PPAD FVG+GGV R+ V K ADWFV +F +L
Sbjct: 5 FKPMKLATTRVTSMP----KGTLKQHRHLSSAASVAIWREAQAVCFDVDSTVCSEEGIDVLAAHCGQGERVAAWTTKAMNGGVKFEDALAARLDIIKPSQKDIADCLRVHPPQLTPGIEALIKGLHARDVHVYFVSGGFRLMIAPVADRLNVPSANIFANTIHFNASGAYAGFDDTEMTSRDGGKPRVLDMLKQQHGYKTVVMVGDGVTDMQAKPPADLFVGFGGVVERDVVKKHADWFVKDFADL 246
BLAST of NO04G04980 vs. NCBI_GenBank
Match: EJK50284.1 (hypothetical protein THAOC_30772 [Thalassiosira oceanica]) HSP 1 Score: 267.3 bits (682), Expect = 5.400e-68 Identity = 129/214 (60.28%), Postives = 157/214 (73.36%), Query Frame = 0
Query: 66 DILKKAQAVCFDVDSTVCAEEGIDVLAEFLGQGQAVADLTAKAMGGTVLFQDALQGRLDLIKPSRAHFADCIAKHPATLSNGVKQFIDILHKRGTAVYLVSGGFRLMIEPVADRLSIPHHRIYANTVLFKEDGTYKGFDPQEPTSRDGGKPAVVKSLKERFGYVDVVMIGDGATDMQARPPADAFVGYGGVTVRENVAKGADWFVYNFQELIDV 280
++L KA AVCFDVDSTV EEGIDVLA+ LG+G VA TAKAMGG V F+DAL RL++I PSR +DC+ +HP LS GV + L +RGT VYLVSGGFRLMIEPVA+ L + IYANT+LF +DG Y GFD EPTS D GKP + +KE GY ++M+GDGATD QA+PPADAF+GYGGV R+ VA ADWFV +F+ +ID+
Sbjct: 2 EMLAKADAVCFDVDSTVIDEEGIDVLADTLGKGPEVAAWTAKAMGGNVKFEDALAARLEIITPSRKQISDCLEQHPLRLSPGVDTLVTKLQQRGTDVYLVSGGFRLMIEPVAEELGVNVKNIYANTILFDDDGEYAGFDSDEPTSADQGKPKALGQIKEAGGYETMIMVGDGATDAQAKPPADAFIGYGGVVRRDAVAAKADWFVTDFETMIDI 215
BLAST of NO04G04980 vs. NCBI_GenBank
Match: XP_008862539.1 (phosphoserine phosphatase SerB [Aphanomyces invadans] >ETW08734.1 phosphoserine phosphatase SerB [Aphanomyces invadans]) HSP 1 Score: 266.2 bits (679), Expect = 1.200e-67 Identity = 131/213 (61.50%), Postives = 152/213 (71.36%), Query Frame = 0
Query: 64 AKDILKKAQAVCFDVDSTVCAEEGIDVLAEFLGQGQAVADLTAKAMGGTVLFQDALQGRLDLIKPSRAHFADCIAKHPATLSNGVKQFIDILHKRGTAVYLVSGGFRLMIEPVADRLSIPHHRIYANTVLFKEDGTYKGFDPQEPTSRDGGKPAVVKSLKERFGYVDVVMIGDGATDMQARPPADAFVGYGGVTVRENVAKGADWFVYNFQEL 277
A I K AQAVCFDVDSTVC+EEGIDVLA GQGQ VA T KAM G V F+DAL RLD+IKPSR ADC+ HP L+ G++ I LH R VY VSGGFRLMI P+ADRL +P ++ANT+ F +G Y GFD E TSRDGGKP V++ LK+ GY VVM+GDG TDMQA+PPAD FVG+GGV R+ V K ADWFV +F EL
Sbjct: 32 AAAIWKSAQAVCFDVDSTVCSEEGIDVLAAHCGQGQRVAAWTTKAMNGGVKFEDALAARLDIIKPSRKDIADCLRVHPPQLTPGIESLISGLHARNIHVYFVSGGFRLMIAPIADRLHVPSTNVFANTIHFDANGYYAGFDDTEMTSRDGGKPRVLEMLKKAHGYKTVVMVGDGVTDMQAKPPADLFVGFGGVVERDVVKKNADWFVKDFAEL 244
BLAST of NO04G04980 vs. NCBI_GenBank
Match: XP_002287672.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED95115.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 266.2 bits (679), Expect = 1.200e-67 Identity = 127/214 (59.35%), Postives = 161/214 (75.23%), Query Frame = 0
Query: 67 ILKKAQAVCFDVDSTVCAEEGIDVLAEFLGQGQAVADLTAKAMGGTVLFQDALQGRLDLIKPSRAHFADCIAKHPATLSNGVKQFIDILHKRGTAVYLVSGGFRLMIEPVADRLSIPHHRIYANTVLFKEDGTYKGFDPQEPTSRDGGKPAVVKSLKERFGYVDVVMIGDGATDMQARPPADAFVGYGGVTVRENVAKGADWFVYNFQELIDVV 281
+L KA AVCFDVDSTV EEGIDVLA+ LG+G V+ TAKAM G + F+DAL RL++IKPS++ A C+ KHP L+ GV + ++ L KRGT+VYLVSGGFRLMIEPVA L + IYANT+LF + G Y GFD EPTS D GKP ++++KE+ GY +VM+GDGATD QA+PPADAF+G+GGV VRE V + A WFV +F+ +ID+V
Sbjct: 1 MLAKADAVCFDVDSTVIDEEGIDVLADTLGKGPEVSAWTAKAMDGNIKFEDALAARLEIIKPSKSDIASCLEKHPLRLTPGVDRLVEALQKRGTSVYLVSGGFRLMIEPVARTLGVNVSNIYANTILFDDKGDYTGFDSNEPTSADQGKPKALRAIKEKAGYNTMVMVGDGATDAQAKPPADAFIGFGGVVVREAVKEKACWFVRDFEVMIDIV 214
BLAST of NO04G04980 vs. NCBI_GenBank
Match: XP_012197864.1 (phosphoserine phosphatase SerB [Saprolegnia parasitica CBS 223.65] >KDO31264.1 phosphoserine phosphatase SerB [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 263.1 bits (671), Expect = 1.000e-66 Identity = 130/215 (60.47%), Postives = 160/215 (74.42%), Query Frame = 0
Query: 66 DILKKAQAVCFDVDSTVCAEEGIDVLAEFLGQGQAVADLTAKAMGGTVLFQDALQGRLDLIKPSRAHFADCIAKHPAT--LSNGVKQFIDILHKRGTAVYLVSGGFRLMIEPVADRLSIPHHRIYANTVLFKEDGTYKGFDPQEPTSRDGGKPAVVKSLKERFGYVDVVMIGDGATDMQARPPADAFVGYGGVTVRENVAKGADWFVYNFQELID 279
+I ++A+AVCFDVDSTV +EGIDVLA GQG AV+ T+KAM G V F+DAL RL++I+PS+A C+A HP T L+ G+++ I L R VYLVSGGFRLMIEPVA L IP RIYANT+ F +DG+YKGFD E TSRDGGKP V++ LK GY VVM+GDGATDMQA+PPAD FVGYGGV R+ V + ADWF+ +F+ELI+
Sbjct: 25 EIWRRAEAVCFDVDSTVIQDEGIDVLAAHCGQGDAVSAWTSKAMNGGVKFEDALAARLNIIQPSKAAIDACLAAHPPTKHLTKGIQRLIQELQARSVDVYLVSGGFRLMIEPVAAHLGIPPSRIYANTIHFHDDGSYKGFDANELTSRDGGKPRVIELLKRECGYKTVVMVGDGATDMQAKPPADLFVGYGGVVARQVVQERADWFLRDFEELIE 239 The following BLAST results are available for this feature:
BLAST of NO04G04980 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G04980 ID=NO04G04980|Name=NO04G04980|organism=Nannochloropsis oceanica|type=gene|length=2190bpback to top protein sequence of NO04G04980.1 >NO04G04980.1-protein ID=NO04G04980.1-protein|Name=NO04G04980.1|organism=Nannochloropsis oceanica|type=polypeptide|length=283bpback to top Synonyms
Publications
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