PSP, gene1717 (gene) Nannochloropsis gaditana

Overview
NamePSP
Unique Namegene1717
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:120772..123159 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100494g2
Gene biotypeprotein_coding
GenePSP
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:120772..123159 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL110ngnoL110Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G04980NO04G04980Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1787rna1787-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna1788rna1788-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1787rna1787Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna1788rna1788Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1787

>rna1787-protein ID=rna1787-protein|Name=rna1787|organism=Nannochloropsis gaditana|type=polypeptide|length=306bp
MMRAGQAVGTLTKQAWQTTSGTSLKMTVSLAFIPAFNIHVGAFSRVRYSS
RPVKAGFSTYQGLDPDRAKDVLKKAQVICFDVDSTVCAEEGIDVLAAFLG
QGQAVADLTAKAMGGSVLFQDALKGRLDLIKPSRADIQNCLLRHPATLSP
GVKEFVGRLQARGTAVYLVSGGFRLMIEPVADRLLVPRDRIYANTLLFAE
NGSYKDFDPNEPTSRDGGKAAVIKSLKEKHGYQDVLMVGDGATDMQARPP
ADAFIGYGGVVVRDPVLQGADWFVRSFQACAFNFGEYARTSILRNSGDFL
KVEVHV
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protein sequence of rna1788

>rna1788-protein ID=rna1788-protein|Name=rna1788|organism=Nannochloropsis gaditana|type=polypeptide|length=306bp
MMRAGQAVGTLTKQAWQTTSGTSLKMTVSLAFIPAFNIHVGAFSRVRYSS
RPVKAGFSTYQGLDPDRAKDVLKKAQAVCFDVDSTVCAEEGIDVLAAFLG
QGQAVADLTAKAMGGSVLFQDALKGRLDLIKPSRADIQNCLLRHPATLSP
GVKEFVGRLQARGTAVYLVSGGFRLMIEPVADRLLVPRDRIYANTLLFAE
NGSYKDFDPNEPTSRDGGKAAVIKSLKEKHGYQDVLMVGDGATDMQARPP
ADAFIGYGGVVVRDPVLQGADWFVRSFQACAFNFGEYARTSILRNSGDFL
KVEVHV
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Synonyms
Publications