NO04G04410, NO04G04410 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G04410 vs. NCBI_GenBank
Match: EWM28827.1 (hypothetical protein Naga_100002g171 [Nannochloropsis gaditana]) HSP 1 Score: 989.2 bits (2556), Expect = 2.200e-284 Identity = 802/2317 (34.61%), Postives = 1071/2317 (46.22%), Query Frame = 0
Query: 1 MDTWLSQTFQPLLQQYVTNYNKEQIKINFLKGKGVIRHVVLNVDELNARLPSETESPWRFARVAIDQVAFKASLTRIKTHPVTIYAEHIDIDIYECVPGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSRPYKLQQRILDGIRFEAKEIRLRLRTLGRRKCGRAGEWNPPDGMWVLRNLTLLSVDEEGLEGDLQECWRFNKERFERAKRRSKPNDYFLFKQLRVESLSFFLLPR---GNGRSSXXXXXXXQNPLLLVEETPITCDFTVRRLLHDVNVVLGVEVDVRLDRFNMRLGQRDGSYQQWIAFLAGLYGCQARRRSTLVLTG---PKRTKMVSGGXXXXXXXXXFXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMAVARPSATFSSRSSQPGRKEEEGSGRPINHSXXXXXXXXXXXXXXXXXXXXXGTRISFDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTPNGSTSTKKGVEVPPTRIALNLSMDRIEIRVLDDAAGSS----SYIGSXXXXXXXXXXXXXXXXCSGGWIFAFQHWRLESIRTETAGPSESLLQFYLGSFDIKLLDSNGEHAKPGSPALFRPLLATLTPYSHVNDNNEKRQPAIFPTLVPRNIREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAGTLDVNVGRRLQLLGDVNAWQRLSVFLQTHTDRRCLTGEWGVETDRYPLQIFPPTGVRDVTMECLGGVVRLLPLTAAXXXXXXXXXXXXXXXXXXPSSLRISDSLPPSSYVSGVLDPRLRTVIKEKEKDNKALTTSFSLVSPPSSEQLPVALAPWRLELCMSDVTLTVPFCGAHRQETVLVSPTSLRLYVGIEDRSESPRLSVPEGVWYVPRDTHASLTIALAFPEPLHVYLHPTACQALVHALLPPSPYPRFLMSSKPSLSSFSSSSSSWPRHSIISSSSFHFSGILTCANLHVTL-PHSD--NHENGDSNSSHPLLSINFQFFQAVVSSKESFGATIQRMHMAVEGVPVLNVGQKEEKRGGEEHRGGGMLLQCDANLGNVEVSDEVHLQVPLDGGRLDTLAELLHVLLSXXXXXXXXXXXXXXXXXXXSLP--SFILRTCTWEMQARKPVVLLVSLDHGKALQMACPHLVLKGTTSAVXXXXXXXXXXXXXXXGDIFPQTEWILNGGLSIASRLGAGAEWRDFVPETQIQLLLLAKKXXXEEMMGEEGRQDNDMKWNVEISWSSLSKDLNAYLSSDLASTVLGMKKRVWILARQALPPPIFLSFTSRKENQSVCSIAELVTAERAWAARMKALGDDARQQARKTRNAVNQAKGEVAEMTIKHQEQVYTLQRLVEEKETQRQHALGLHHADFAGYLRVGSLSTSSSLPSSLSRTGRRGGSKRMMPMGGLSGVRAKTLVTLPKLWCVLKEGLLLCYDQPHSFQIQHVLTXXXXXXXXXXXXXXXXXTLQPFTPSDPPSSRLHNRLYALSYHQQGGEAEPLFLVCETSTEIPLWKEALEPYLMITGESTPSHSFKRMTKRMSLLHRISSLDLSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAIGSSELRKLVVLIEPVTIAAQMGTDTLPLSACYTLASSNFVEVGAVGEVEVQQ-------KQRSWSVTHTWPTIQAFHQEYIQLWTTALDEDGKDRMPRHLSTGLKPWEAVSYAHKLLIGASRLLEMPHSFASDFERQEQANILERYWRLILDMCPPHPSCLALLQRFLGLPPVYALLHLTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADTMFSAVKATAAIN-------TTLHELEKRVQGLDALITNNQITGALYSTLFHEHHQAAEERSKLLSQQVLQLQXXXXXXXXXXXXXXXXXERAHSAREDAVLAMTEVSTDAARKLMEAELRHAAMLRKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVPDRINCDNRHNKSNSS-------------GSGEHAARRIPKFEKNTNRSNSYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGILNWQL----------SSXXXXXXXXXXXXXXXXGRAPSPVMMLGEGRISKAQHYETIFRLKRLAVAREEEIGTLKEELQRARGKLDKYEQRVSQWQKEGEEGGREEGVEKE-------EENVDEVLILWRRRVREAENRRAEA 2259
MD++LSQT QPLLQQY+ NY+KEQIKINFLKGKGV+R++VLNVDE+NARLP E RFARVA+DQVAFKASLTRIKT PV+IY E +DID+YE P XXXXXXXXXXX Y LQQRILDGIR E +EIR R+R LGRRKCG+AGEWNPPDG+WV R+L LLSV EEGLEG+L+ECWRFNK+RF + +P DY+LFKQLR+ S+S FLLPR + S + LL+VEETP+ CD +RR +HDVN +L +EVDVR+DRF MRLG D +Y+QW AF+ LY C AR S L ++ P T G + P A + + S RK E R+S +Y XXXXXXXXXXXXXXXXXXXX T K +P R+A+++S+D ++IR++DD S+ Y+ S GW++ FQ R+E IR E AGP E +LQ YLGSFD+K+LD GE A P L RP LATL P E +++PTL P + R XXXXX LAGTL+VN+GR+LQ+L + +AW+RL L THTD RC++G+WG +T Y LQ FPP GVRDV ++C G + R + +A SSLRIS SL PSSY ++D RLR ++ + K + T ++PP S+ P L P RLE+CM+DV + G RQ ++ PTSL LYV +EDR PR +V E +WYVP D HASLT+AL+ P+P+ ++++P C+AL AL PP+ + + P L S + S SS+ +I SSS F + TCA+L +TL HSD + PL + F QA ++SK S + R+HM G VL +G + R G+LL+ D N G+++V L VPL+ G +D L ELL L S+P SF +T +WE +A + + VS D K+L+ C L+LKG+ G + + A ++ AGA+W ++P I + +M G ++ W+V + WS+L L +LSS LA+ + +K+RV LAR+ALP +S S S S AEL AER + R + L R Q + +N+AK + A H+ Q+ + R VE KE QRQHAL HHADFAG+L VGSL + +S+ G SKR ++GV+AK L+ LP+LWCVL+ GLLLCYDQP+SF+I+ VLT TLQPFTPSD PSSR ++RLYALSY G+ +PLFLVC+ ++ WKEAL PY+ + G S S + KR LLHR+S S GS + + L V+ +P+ + G + + A YT+ +S VE E Q + RSWSVTH++P IQAFH+EY ++WTTA +D K + G P EA+ YAH+LL GA+ LL+MP F S ERQEQ +L RYW+L++ C H C A L RFL LP +AL + P AD + + N + L + E+++ + + +T LY+ + +H QA E S Q+V QLQ +A R+DAV AMTEVS DA RKLME+ELR+AA RK P P + D + S S+ G + + R + + N++L SS R PSP + G IS+A HY+ +F++K L AR EE+G+LKE L+ A GK+ YE RV +W E E + EK +E +D+VL LWR RV +AE+ R +A
Sbjct: 1 MDSFLSQTLQPLLQQYIENYSKEQIKINFLKGKGVMRNIVLNVDEINARLPPEAYRHMRFARVAMDQVAFKASLTRIKTQPVSIYVERMDIDLYE--QTPKSSRQPTTHPTASCATASPXXXXXXXXXXXXXXXYTLQQRILDGIRVEIREIRFRVRALGRRKCGKAGEWNPPDGLWVFRDLVLLSVTEEGLEGNLEECWRFNKQRFAAERLAGRPKDYYLFKQLRMGSMSLFLLPRDTLASSTSGKCTSSGSRPNLLIVEETPLACDIMIRRSMHDVNCLLDLEVDVRIDRFKMRLGLADKTYEQWFAFIVALYCCAARPGSALAVSTSALPDETSEAQQGTGPPPAD---------------------------------PLHTPLAEEAEQGSDYARKGTE--------LDRISSAEIEGFEAETKGTVVGDGRLSLEYASEDXXXXXXXXXXXXXXXXXXXXTLLTSADLLGEKEAHERSDIEANTL---------------MTPDKASPSLP--RVAMSVSIDDVQIRLVDDIGRSNDPNDQYLPSPGADNQESDK-------GAGWLWRFQRCRVEDIRPEAAGPDEHILQMYLGSFDLKVLDGLGEGAVSNEPVLLRPTLATLLPKPVGKMAGEAH--SVYPTLEPFSAR---------GEGASEGGGHRGDATSHTHLEVPDTVRLKLHTFAYPXXXXXRLAGTLEVNIGRKLQVLANAHAWRRLLDVLVTHTDARCMSGDWGRKTRDYTLQDFPPPGVRDVVVKCQGLLAR---MPSAPVACEWAEAGWAFSLGIGISSLRISHSLLPSSYFHELMDSRLRLPVENQRKSCRRRTP--RSLTPPLSQ--PKKLVPLRLEVCMADVNVVAHPHGHCRQNFEVLPPTSLNLYVSVEDRLGVPRPAVLEDLWYVPLDAHASLTVALSLPDPVGLHINPPICKALALALWPPA----YCGRTNPRLGSETLSKSSFLLDAIASSS---FDALATCASLQITLYEHSDCLTIPSSTLKEGPPLFKVAFYSCQA-MASKVSCSGLLHRLHMTHVGRSVLEMGLTD--------RDKGILLRFDDNSGSIQVPGHTRLHVPLEDGPMDRLVELLRSFL-------PSPRSIAGKHSTASIPVHSFWSQTRSWEYRAVEKTTVCVSTDGDKSLRFVCEQLLLKGS----FLPENVPGPNDGDHIGTVVEYPHITFRVRMHSAYQMKAGADWEQWIPGAGILV----------KMEGNPNTREESRAWSVSLEWSNLPSYL--HLSSSLATILTDIKERVRSLARKALPRSTRMSVESFPREMSFLSRAELNKAERVLSKRTRDLSRGLRHQMEEAMCLLNEAKKKTALAVSSHRRQLQSWHRRVERKELQRQHALAFHHADFAGFLHVGSLISPTSM----------GKSKRT----SMNGVKAKHLINLPRLWCVLRNGLLLCYDQPNSFKIERVLT------VSDKEPCSNSVTLQPFTPSDRPSSRFYDRLYALSYCT--GDDDPLFLVCQEVADLASWKEALGPYVKLDGASDVPSSVRETPKRAVLLHRLS------SDTRTFRTGKATIDPSPRGSKRFSLKGLGFRKTQGQQHYLENTPLSQTLALTCSLTHSTPNPPALKDEPTSPSLLSTCTPNITAAASSACGAGSDKFKHLSVIAQPL---VRTGREHASVVASYTM-TSRLVERITRDEHGCPQDPLHGHVETRSWSVTHSFPVIQAFHEEYTRVWTTARRDDNKVEAALQ-ADGRSPHEAMGYAHQLLEGAAHLLKMP--FPSPLERQEQGVLLGRYWQLVVGTCQAHGLCRAFLGRFLRLPD-WALQNPQP-----------------------------------HMESVADEPIPVTTESASADVAADTIDISGDNNIQDDPLLSILSKFEEKLGSICLAVRKCHMTNILYTAVVKDHGQAIERESSAGKQRVEQLQEALQEEKRRGALLVQEVVKAQLIRDDAVAAMTEVSLDAGRKLMESELRYAAFCRKLPHHLQPQSNHRRRPSRGHTPTRHVQSHHHATGTGAARLKTTSP----PSPLQLDGSRDSSASAKSFVSSRGLSCDRGQVSNLRAALASEADGGVRPVTSPRQRRQQLEELLMSSNASMSHTLFATSNAKTTASVGNFKLSRQLSSMDGESSSPLASSEVAGVTLSTSNRCPSPTV---TGAISQAHHYDVVFKMKGLLAARLEEVGSLKERLKEAEGKVKMYEDRVHRWGVEARESVQMTRKEKTSKVKELGQEAIDDVLDLWRERVGQAEDGRKKA 2115
BLAST of NO04G04410 vs. NCBI_GenBank
Match: OEU22357.1 (hypothetical protein FRACYDRAFT_259045 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 82.0 bits (201), Expect = 2.600e-11 Identity = 81/318 (25.47%), Postives = 126/318 (39.62%), Query Frame = 0
Query: 9 FQPLLQQYVTNYNKEQIKINFLKGKGVIRHVVLNVDELN---ARLPSETESPW-RFARVAIDQVAFK-ASLTRIKTHPVTIYAEHIDIDIYECVPGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSRPYKLQQRILDGIRFEAKEIRLRLRTLGRRKCGRAGEWNPPDGMWVLRNLTLLSVDEEGLEGDLQECWRFNKERFERAKRRSKPNDY-FLFKQLRVESLSFFLLPRGNGRSSXXXXXXXQNPLLLVEETPITCDFTVRRLLHDVNVVLGVEVDVRLDRFNMRLGQRDGSYQQWIAFLAGLYGCQARRRS 321
FQ L + + + KEQ+ N L GKG IR V LN D +N ARL P+ R + + ++ F S T ++ P+ + + I E + ++ Y L RI+D + + K RL +T G+ K R G W PP +NL + VD EG EG+ E W N RR N Y ++ + +V + P N + P L + + V+R L D +L V+VDV + + ++ + R S + G+ C A+ RS
Sbjct: 9 FQEQLAKIIVGFRKEQVNANLLNGKGEIRDVSLNCDVINDSIARL-----CPYIRLEEIHVSRIGFHVTSWTNLRKAPIIVDIGIVSAKIQEPL---SLLPRNQRRLIELITEGELIRKIAEGLKPFRTGAYGLVDRIVDNLMIDVKSFRLEFQTWGKFKTRRPGPWTPPLLQVECKNLKICMVDAEGNEGNPDEVWHHN------GGRRDSINIYKKVYGECQVRLVPQHFDPENNSSTE-------SQPCELA-KMKMEIQMAVKRRLRD-GAILAVQVDVMIPKVDVDIDSR--SIRLLTHLAIGMQYCLAKDRS 301
BLAST of NO04G04410 vs. NCBI_GenBank
Match: XP_002181933.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46473.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 76.6 bits (187), Expect = 1.100e-9 Identity = 62/230 (26.96%), Postives = 94/230 (40.87%), Query Frame = 0
Query: 1 MDTWLSQTFQPLLQQYVTNYNKEQIKINFLKGKGVIRHVVLNVDELNARLPSETESPW-RFARVAIDQVAFK-ASLTRIKTHPVTIYAEHIDIDIYECVPGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSRPYKLQQRILDGIRFEAKEIRLRLRTLGRRKCGRAGEWNPPDGMWVLRNLTLLSVDEEGLEGDLQECWRFNKERFERAKRRSKPNDYFLFKQLRVE 229
M+ ++ FQ L +++ + KEQ+ N L GKG I V LN LN L T P+ V + + +F +S T I+ P+ + EHI E + + PY + RI+D + E LR +TL G W PP+ L + L+SVDE GLE +E WR N R + + ++K+L +E
Sbjct: 1 MEQFVLGIFQEQLAKFIVGFRKEQVTANLLNGKGEIHDVELNCAFLNDELTKIT--PFIELESVHVSKFSFHVSSWTNIRKAPIIVDVEHIKAVAVEPL---RYKDRSRQQQIRQITRYELIELIRKGLLKPKGTPYNIFDRIVDNLTVEVSTCSLRYQTL--------GPWTPPEIHVTLAGIRLVSVDEYGLEAPPEEVWRHNHNR--------RAGTFMIYKKLEME 209
BLAST of NO04G04410 vs. NCBI_GenBank
Match: XP_002289393.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92930.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 75.9 bits (185), Expect = 1.900e-9 Identity = 55/207 (26.57%), Postives = 83/207 (40.10%), Query Frame = 0
Query: 1 MDTWLSQTFQPLLQQYVTNYNKEQIKINFLKGKGVIRHVVLNVDELN---ARLPSETESPWRFARVAIDQVAFK-ASLTRIKTHPVTIYAEHIDIDIYECVPGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSRPYKLQQRILDGIRFEAKEIRLRLRTLGRRKCGRAGEWNPPDGMWVLRNLTLLSVDEEGLEGDLQECWRFN 204
M+ ++ F L + + +++ QI NFL GKG I +V LNV +N A+ P +F+ + + ++ + S T +K PV + + I E PY L RILD + I L + LG+ K R G W PP M L N+ +SV+E G G + CW N
Sbjct: 1 MENFIVNLFSDQLSKIILDFSTNQINANFLSGKGSITNVRLNVGVINDFLAKPPHGVLPYLQFSDITLSELRVEVTSYTNLKKAPVVLVIDEIHARAIE-------PLEYHFENANKSAPPAAPPQSQNKVNPQPKPPYGLLHRILDNLSIRINRINLTFQPLGKFKTRRVGPWTPPPMMVSLENVEWISVNELGNPGTPEMCWAHN 200 The following BLAST results are available for this feature:
BLAST of NO04G04410 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 4
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G04410 ID=NO04G04410|Name=NO04G04410|organism=Nannochloropsis oceanica|type=gene|length=7279bpback to top protein sequence of NO04G04410.1 >NO04G04410.1-protein ID=NO04G04410.1-protein|Name=NO04G04410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=2322bpback to top Synonyms
Publications
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