Naga_100002g171, gene1775 (gene) Nannochloropsis gaditana

Overview
NameNaga_100002g171
Unique Namegene1775
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:300807..307785 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100002g171
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:300807..307785 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL110ngnoL110Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G04410NO04G04410Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1853rna1853-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1853rna1853Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1853

>rna1853-protein ID=rna1853-protein|Name=rna1853|organism=Nannochloropsis gaditana|type=polypeptide|length=2178bp
MDSFLSQTLQPLLQQYIENYSKEQIKINFLKGKGVMRNIVLNVDEINARL
PPEAYRHMRFARVAMDQVAFKASLTRIKTQPVSIYVERMDIDLYEQTPKS
SRQPTTHPTASCATASPEQSPPGPSGPLPLSPYTLQQRILDGIRVEIREI
RFRVRALGRRKCGKAGEWNPPDGLWVFRDLVLLSVTEEGLEGNLEECWRF
NKQRFAAERLAGRPKDYYLFKQLRMGSMSLFLLPRDTLASSTSGKCTSSG
SRPNLLIVEETPLACDIMIRRSMHDVNCLLDLEVDVRIDRFKMRLGLADK
TYEQWFAFIVALYCCAARPGSALAVSTSALPDETSEAQQGTGPPPADPLH
TPLAEEAEQGSDYARKGTELDRISSAEIEGFEAETKGTVVGDGRLSLEYA
SEDEEEGDEGEEEEEEGEEGGESTLLTSADLLGEKEAHERSDIEANTLMT
PDKASPSLPRVAMSVSIDDVQIRLVDDIGRSNDPNDQYLPSPGADNQESD
KGAGWLWRFQRCRVEDIRPEAAGPDEHILQMYLGSFDLKVLDGLGEGAVS
NEPVLLRPTLATLLPKPVGKMAGEAHSVYPTLEPFSARGEGASEGGGHRG
DATSHTHLEVPDTVRLKLHTFAYPPPPPPRLAGTLEVNIGRKLQVLANAH
AWRRLLDVLVTHTDARCMSGDWGRKTRDYTLQDFPPPGVRDVVVKCQGLL
ARMPSAPVACEWAEAGWAFSLGIGISSLRISHSLLPSSYFHELMDSRLRL
PVENQRKSCRRRTPRSLTPPLSQPKKLVPLRLEVCMADVNVVAHPHGHCR
QNFEVLPPTSLNLYVSVEDRLGVPRPAVLEDLWYVPLDAHASLTVALSLP
DPVGLHINPPICKALALALWPPAYCGRTNPRLGSETLSKSSFLLDAIASS
SFDALATCASLQITLYEHSDCLTIPSSTLKEGPPLFKVAFYSCQAMASKV
SCSGLLHRLHMTHVGRSVLEMGLTDRDKGILLRFDDNSGSIQVPGHTRLH
VPLEDGPMDRLVELLRSFLPSPRSIAGKHSTASIPVHSFWSQTRSWEYRA
VEKTTVCVSTDGDKSLRFVCEQLLLKGSFLPENVPGPNDGDHIGTVVEYP
HITFRVRMHSAYQMKAGADWEQWIPGAGILVKMEGNPNTREESRAWSVSL
EWSNLPSYLHLSSSLATILTDIKERVRSLARKALPRSTRMSVESFPREMS
FLSRAELNKAERVLSKRTRDLSRGLRHQMEEAMCLLNEAKKKTALAVSSH
RRQLQSWHRRVERKELQRQHALAFHHADFAGFLHVGSLISPTSMGKSKRT
SMNGVKAKHLINLPRLWCVLRNGLLLCYDQPNSFKIERVLTVSDKEPCSN
SVTLQPFTPSDRPSSRFYDRLYALSYCTGDDDPLFLVCQEVADLASWKEA
LGPYVKLDGASDVPSSVRETPKRAVLLHRLSSDTRTFRTGKATIDPSPRG
SKRFSLKGLGFRKTQGQQHYLENTPLSQTLALTCSLTHSTPNPPALKDEP
TSPSLLSTCTPNITAAASSACGAGSDKFKHLSVIAQPLVRTGREHASVVA
SYTMTSRLVERITRDEHGCPQDPLHGHVETRSWSVTHSFPVIQAFHEEYT
RVWTTARRDDNKVEAALQADGRSPHEAMGYAHQLLEGAAHLLKMPFPSPL
ERQEQGVLLGRYWQLVVGTCQAHGLCRAFLGRFLRLPDWALQNPQPHMES
VADEPIPVTTESASADVAADTIDISGDNNIQDDPLLSILSKFEEKLGSIC
LAVRKCHMTNILYTAVVKDHGQAIERESSAGKQRVEQLQEALQEEKRRGA
LLVQEVVKAQLIRDDAVAAMTEVSLDAGRKLMESELRYAAFCRKLPHHLQ
PQSNHRRRPSRGHTPTRHVQSHHHATGTGAARLKTTSPPSPLQLDGSRDS
SASAKSFVSSRGLSCDRGQVSNLRAALASEADGGVRPVTSPRQRRQQLEE
LLMSSNASMSHTLFATSNAKTTASVGNFKLSRQLSSMDGESSSPLASSEV
AGVTLSTSNRCPSPTVTGAISQAHHYDVVFKMKGLLAARLEEVGSLKERL
KEAEGKVKMYEDRVHRWGVEARESVQMTRKEKTSKVKELGQEAIDDVLDL
WRERVGQAEDGRKKAERLLKKSRAQWKRLLTQIKEEESDNEIAEEEEVRE
SGRMEEGSMRRDNDYRRLLRALEEGAML
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Synonyms
Publications