jgi.p|Nanoce1779_2|668898, gene_2228 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|668898
Unique Namegene_2228
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:1103873..1112133 -

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Properties
Property NameValue
TranscriptId668984
ProteinId668898
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:1103873..1112133 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL058ncniL058Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G04410NO04G04410Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668898mRNA_2228-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668898mRNA_2228Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|668898

>mRNA_2228-protein ID=mRNA_2228-protein|Name=jgi.p|Nanoce1779_2|668898|organism=Nannochloropsis oceanica|type=polypeptide|length=2063bp
MADALLAATMDTWLSQTFQPLLQQYVTNYNKEQIKINFLKGKGVIRHVVL
NVDELNARLPSETESPWRFARVAIDQVAFKASLTRIKTHPVTIYAEHIDI
DIYECVPGPPSSSSSSSSRPPLTPGTSTTTSTSDIPPPTQSRPYKLQQRI
LDGIRFEAKEIRLRLRTLGRRKCGRAGEWNPPDGMWVLRNLTLLSVDEEG
LEGDLQECWRFNKERFERAKRRMRRLLHDVNVVLGVEVDVRLDRFNMRLG
QRDGSYQQWIAFLAGLYGCQARRRSTLVLTGPKRTKIVSGGGAKGGEDDS
FSWAESVGGGGGGGGGKGGGGGGGEGGTADMAVARPSATFSSRSSQPGRK
EEEGSGRPINHSPSPGVAGFGAGAGAGGNVEVDGTRISFDYYQSEEEENE
DDEEEEEQEGKEAGDIFTLDDEESVVSEMKAAAVGGAGAGGGGGGGGEEG
DLPPTPNGGTSTKKGVEVPPTRIALNLSMDRIEIRVLDDAAGSSSYIGSG
SSSGSSGSRSSKNSNCSGGWIFAFQHWRLESIRTETAGPSESLLQFYLGS
FDIKLLDSNGEHAKPGSPALFRPLLATLTPYSHVNDNNEKRQPAIFPTLV
PRNIREEEEEEEEEEAKGDGTLRFRSKRSESCPLSIPDTLTLKLRVFAYP
PPPPPQLAGTLDVNVGRRLQLLGDVNAWQRLSVFLQTHTDRRCLTGEWGV
ETDRYPLQIFPPTGVRDVTMECLGGVVRLLPLTAASAATASADTTATLTL
GLGPSSLRISDSLPPSSYVSGVLDPRLRTVIKEKEKDNKALTTSFSLVSP
PSSEQLPVALAPWRLELCMSDVTLTVPFCGAHRQETVLVSPTSLRLYVGI
EDRSESPRLSVPEGILTCANLHVTLPHSDNHENGDSNSSHPLLSINFQFF
QAVVSSKESFGATIQRMHMAVEGVPVLNVGQKEEKRGGEEHRGGGMLLQC
DANLGNVEVSDEVHLQVPLDGGRLDTLAELLHVLLSSSTSPSSSSSPSSS
PLSSASLPSFILRTCKWEMQARKPVVLLVSLDHGKALQMACPHLVLKGTP
SAVSAGSSNSSNNGSSDSGDIFPQTEWILNGGLSIASRLGAGAEWRDFVP
ETQIQLLLLAKKTTTEEMMGEERRQDNDMKWNVEISWSSLSKDLNAYLSS
DLASTVLGMKKRVWILARQALPPPIFLSFTSRKENQSVCSIAELVTAERA
WAARMKALGDDARQHARKTRNAVNQAKGEVAEMTIKHQEQVYTLQRLVEE
KETQRQHALGLHHADFAGYLRVGSLSTSSSLPSSLSRTGRRGGSKRMMPM
GGLSGVRAKTLVTLPKLCRLHNRLYALSYHQPGGEAEPLFLVCETSTEIP
FSLDLSASSGSSSSSKTAATESPKSIARFSLKKFGLRKLTKQQQRQQRQQ
QQRYPEFLEEDNPPSVSPISSCSNYAITSASPPAPPPPQQQQWQQHVAIG
SSELRKLVVLIEPVTIAAQMGTDTLPLSACYTLASSNFVEVGAVGEVEVR
QKQRSWSVTHTWPTIQAFHQEYIQLWTTALDEDGKDRMPRHLSTGLKPWE
AVSYAHKLLIGASRLLEMPHSFASDFERQEQANILERYWRLILDMCPPHP
SCLALLQRFLGLPPVTATAANAATAEVTADTMFSAVKATAAINTTLHELE
KRVQGLDALITNNQITGALYSTLFHEHHQAAEERSKLLSQQVLQLQQALE
EEKQRRSRLEEEVERAHSAREDAVLAMTEVSTDAARKLMEAELRHAAMLR
KAPQYQQRQQQQQHRRAHHSHGRHVQSHHHATATVKAHALTATPPPPLVP
DRINCDNRHNKSNSSGSGEHAARRIPKFEKNTNRSNSYHHDDGIKPVTTP
QQRREQLEELLMIASSNSGSNGILNWQLSSSTHGEGGGEGGGRGGDGRAP
SPVMMLGDGRISKAQHYETIFRLKRLAVAREEEIGTLKEELQRAQGKLDK
YEQRVSQWQKEGEEGGREEGVEKEEENVDEVLILWRRRVREAENRRAEAE
RQSDELRAEWRRLLTQINEEKTEVEEGREEGRECGVKKEDAWGRMRGEYC
QLLHLVRERAMG*
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Synonyms
Publications