NO04G04090, NO04G04090 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G04090 vs. NCBI_GenBank
Match: EWM28671.1 (zinc ion binding protein [Nannochloropsis gaditana]) HSP 1 Score: 337.4 bits (864), Expect = 5.800e-89 Identity = 183/377 (48.54%), Postives = 225/377 (59.68%), Query Frame = 0 Query: 27 KCRPWSEADFFHRLRTFTPQHWFGKSLLVAPPRCAAQGWVNSSTDTLECQICQATLTLPSNSEPAPDILSSSHSITCPWAHQACEPDVSHFPLVTAECLLTHTARRMGGIRPLLQAYKGDLTVKVPEEFNKLMAGCKIQGEGVGEGRDGVGSLTLEALARRVEECIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALELKGNGLILALHGWEAGPPPR--QPESGGRGGR---GWALICGMCGRRVEVGRVVDRRSSLGSGRMMEGGGEKGEDVGRAKARRVGGMAGPAAFDVMNQHRWWCAWVSRGLDEKGQPGWRLTLKTLVGRMRRMVELG--KLMEDEGDSG-------DRSWGVGSSSSSYARAKRLLDGM 390 KCRPWSEADFFHRLRTFTPQ WFGKSL + PPRCAAQGWVN DTL C++CQA LT EPAPD+LS+SH++TCPW QACE +VSHFPLVTA+ LL+H A R+ G R LL+AY G ++ +PEE L+ G K++ + LTL+ LA RV++ ++ + K L LAL GWEA P + +SGG GR W L CG+CGR ++ R+ DRR S G GR EG G K E + R KAR V GP FD ++QHRWWC WVSRG+DEKG GWR LK +VGRMR++ +LG L E E D G D S S SS Y++ K L+D M Sbjct: 79 KCRPWSEADFFHRLRTFTPQRWFGKSLALTPPRCAAQGWVNVDMDTLVCELCQARLTHTDGHEPAPDLLSASHTLTCPWRQQACETEVSHFPLVTAQSLLSHIADRLEGCRRLLRAYHGVFSISIPEELQTLIDGVKMKKGASSQS----ARLTLDILADRVQDWLQDVASAAPGVGEVGGE----------------DEKRGALTLALLGWEAFPLSKGSPTQSGGNIGRPRGDWVLKCGLCGRSIQASRIADRRGSFGRGRGSEGEG-KEEQIPRVKARSVESPLGPLTFDAVSQHRWWCPWVSRGMDEKGMLGWRQALKAVVGRMRQVEDLGLLGLSEQEADMGKHNGLGLDDSLNSPSYSSMYSKVKCLMDSM 434
BLAST of NO04G04090 vs. NCBI_GenBank
Match: EPS69993.1 (hypothetical protein M569_04773, partial [Genlisea aurea]) HSP 1 Score: 90.9 bits (224), Expect = 9.500e-15 Identity = 43/124 (34.68%), Postives = 63/124 (50.81%), Query Frame = 0 Query: 28 CRPWSEADFFHRLRTFTPQHWFGKSLLVAPPRCAAQGWVNSSTDTLECQICQATLTLPS-------NSEPAPDI----LSSSHSITCPWAHQACEPDVSHFPLVTAECLLTHTARRMGGIRPLL 141 C+PW DFF RL TF WF K +++P CA +GW+NS DT+ C C A L + E A + L + H + CPW + AC D++HFP V++ L RR+ + ++ Sbjct: 78 CKPWDRDDFFSRLSTFKSISWFAKPQVLSPVECARRGWINSDIDTVVCSYCGARLLFATPLSWTQQQVEKAAVVFSLKLEAGHKMLCPWINNACAEDIAHFPDVSSRVLAEDYKRRITSLSQII 201
BLAST of NO04G04090 vs. NCBI_GenBank
Match: EYU19018.1 (hypothetical protein MIMGU_mgv1a003304mg [Erythranthe guttata]) HSP 1 Score: 88.6 bits (218), Expect = 4.700e-14 Identity = 43/123 (34.96%), Postives = 62/123 (50.41%), Query Frame = 0 Query: 28 CRPWSEADFFHRLRTFTPQHWFGKSLLVAPPRCAAQGWVNSSTDTLECQICQATLTLPSNS-------EPAPDI----LSSSHSITCPWAHQACEPDVSHFPLVTAECLLTHTARRMGGIRPL 140 CRPW D RL TF WF K +V+P CA +GWVN TDT+ C C + L + S E A + L S H + CPW + ACE +++ FP ++ + L+ +R+ + L Sbjct: 67 CRPWDRDDLLRRLSTFKSMSWFAKPQVVSPLECARRGWVNVDTDTIACASCDSRLFFSTPSTWTRQQVEKAAMVFSLKLESGHKLLCPWTNSACEEELAQFPTLSRDGLIEDYKKRVFSLSQL 189
BLAST of NO04G04090 vs. NCBI_GenBank
Match: XP_012827682.1 (PREDICTED: nuclear-interacting partner of ALK isoform X1 [Erythranthe guttata]) HSP 1 Score: 88.6 bits (218), Expect = 4.700e-14 Identity = 43/123 (34.96%), Postives = 62/123 (50.41%), Query Frame = 0 Query: 28 CRPWSEADFFHRLRTFTPQHWFGKSLLVAPPRCAAQGWVNSSTDTLECQICQATLTLPSNS-------EPAPDI----LSSSHSITCPWAHQACEPDVSHFPLVTAECLLTHTARRMGGIRPL 140 CRPW D RL TF WF K +V+P CA +GWVN TDT+ C C + L + S E A + L S H + CPW + ACE +++ FP ++ + L+ +R+ + L Sbjct: 68 CRPWDRDDLLRRLSTFKSMSWFAKPQVVSPLECARRGWVNVDTDTIACASCDSRLFFSTPSTWTRQQVEKAAMVFSLKLESGHKLLCPWTNSACEEELAQFPTLSRDGLIEDYKKRVFSLSQL 190
BLAST of NO04G04090 vs. NCBI_GenBank
Match: XP_012827683.1 (PREDICTED: nuclear-interacting partner of ALK isoform X2 [Erythranthe guttata]) HSP 1 Score: 88.6 bits (218), Expect = 4.700e-14 Identity = 43/123 (34.96%), Postives = 62/123 (50.41%), Query Frame = 0 Query: 28 CRPWSEADFFHRLRTFTPQHWFGKSLLVAPPRCAAQGWVNSSTDTLECQICQATLTLPSNS-------EPAPDI----LSSSHSITCPWAHQACEPDVSHFPLVTAECLLTHTARRMGGIRPL 140 CRPW D RL TF WF K +V+P CA +GWVN TDT+ C C + L + S E A + L S H + CPW + ACE +++ FP ++ + L+ +R+ + L Sbjct: 67 CRPWDRDDLLRRLSTFKSMSWFAKPQVVSPLECARRGWVNVDTDTIACASCDSRLFFSTPSTWTRQQVEKAAMVFSLKLESGHKLLCPWTNSACEEELAQFPTLSRDGLIEDYKKRVFSLSQL 189
BLAST of NO04G04090 vs. NCBI_GenBank
Match: OTG07404.1 (putative zinc finger, C3HC-like protein [Helianthus annuus]) HSP 1 Score: 88.6 bits (218), Expect = 4.700e-14 Identity = 41/126 (32.54%), Postives = 57/126 (45.24%), Query Frame = 0 Query: 21 IDESLHKCRPWSEADFFHRLRTFTPQHWFGKSLLVAPPRCAAQGWVNSSTDTLECQICQATLTLPS----------NSEPAPDILSSSHSITCPWAHQACEPDVSHFPLVTAECLLTHTARRMGGI 137 + S CRPW D RL TF+P +WFGK + CA +GWVN DT++C+ C LT + N E ++L H+ TCPW +C + FP L+ R G+ Sbjct: 78 LGSSKPSCRPWERGDLLRRLSTFSPANWFGKPKAASSLSCARRGWVNVDVDTIQCEACGENLTYDAQDSWARTEGENGEEFANLLDEGHNATCPWRGNSCAASLVQFPPTPPSALIGGYKDRCDGL 203
BLAST of NO04G04090 vs. NCBI_GenBank
Match: XP_021993022.1 (uncharacterized protein LOC110889765 [Helianthus annuus] >XP_021993023.1 uncharacterized protein LOC110889765 [Helianthus annuus] >XP_021993024.1 uncharacterized protein LOC110889765 [Helianthus annuus]) HSP 1 Score: 88.6 bits (218), Expect = 4.700e-14 Identity = 41/126 (32.54%), Postives = 57/126 (45.24%), Query Frame = 0 Query: 21 IDESLHKCRPWSEADFFHRLRTFTPQHWFGKSLLVAPPRCAAQGWVNSSTDTLECQICQATLTLPS----------NSEPAPDILSSSHSITCPWAHQACEPDVSHFPLVTAECLLTHTARRMGGI 137 + S CRPW D RL TF+P +WFGK + CA +GWVN DT++C+ C LT + N E ++L H+ TCPW +C + FP L+ R G+ Sbjct: 78 LGSSKPSCRPWERGDLLRRLSTFSPANWFGKPKAASSLSCARRGWVNVDVDTIQCEACGENLTYDAQDSWARTEGENGEEFANLLDEGHNATCPWRGNSCAASLVQFPPTPPSALIGGYKDRCDGL 203
BLAST of NO04G04090 vs. NCBI_GenBank
Match: XP_011072908.1 (uncharacterized protein LOC105158011 [Sesamum indicum]) HSP 1 Score: 88.2 bits (217), Expect = 6.100e-14 Identity = 47/144 (32.64%), Postives = 68/144 (47.22%), Query Frame = 0 Query: 28 CRPWSEADFFHRLRTFTPQHWFGKSLLVAPPRCAAQGWVNSSTDTLECQICQATLTLPSNS-------EPAPDI----LSSSHSITCPWAHQACEPDVSHFPLVTAECLLTHTARRMGGIRPLLQAYKGDLTVKVPEEFNKLMA 161 CRPW D F RL TF WF K +V+P CA +GW+N DT+ C C L + S E A + L S H CPW + AC D++ FP+V+ L+ +R+ + L+ L V +P + +M+ Sbjct: 75 CRPWDRDDLFRRLSTFKSMTWFAKPQVVSPLECARRGWLNVDMDTIACVSCDTRLLFSTPSAWTQQQVEKAAMVFSLKLDSGHKSLCPWINNACTEDIAKFPIVSRADLIEDYKKRLFSLSQLIA-----LPVILPVAIDNIMS 213
BLAST of NO04G04090 vs. NCBI_GenBank
Match: PIN05762.1 (hypothetical protein CDL12_21697 [Handroanthus impetiginosus]) HSP 1 Score: 88.2 bits (217), Expect = 6.100e-14 Identity = 43/125 (34.40%), Postives = 62/125 (49.60%), Query Frame = 0 Query: 27 KCRPWSEADFFHRLRTFTPQHWFGKSLLVAPPRCAAQGWVNSSTDTLECQICQATLTLPSNS-------EPAPDI----LSSSHSITCPWAHQACEPDVSHFPLVTAECLLTHTARRMGGIRPLL 141 +CRPW D F RL +F WF K +V+P CA +GWVN DT+ C C A L + S E A + L S H + CPW + AC +++ FP+V+ L+ +R + L+ Sbjct: 76 RCRPWDRNDLFQRLSSFKSMTWFAKPQVVSPLECARRGWVNVDMDTIACPSCDARLLFSTPSTWGQRQVEKAAMVFSLKLESGHKLLCPWINNACTEELAQFPIVSRAVLVEDYKKRFFSLSQLI 200
BLAST of NO04G04090 vs. NCBI_GenBank
Match: XP_006846088.1 (uncharacterized protein LOC18435993 [Amborella trichopoda] >ERN07763.1 hypothetical protein AMTR_s00012p00097440 [Amborella trichopoda]) HSP 1 Score: 87.8 bits (216), Expect = 8.000e-14 Identity = 44/123 (35.77%), Postives = 55/123 (44.72%), Query Frame = 0 Query: 28 CRPWSEADFFHRLRTFTPQHWFGKSLLVAPPRCAAQGWVNSSTDTLECQICQATLTL--PSNSEPAPD---------ILSSSHSITCPWAHQACEPDVSHFPLVTAECLLTHTARRMGGIRPL 140 CRPW DF RL TF WF K +V P CA +GW+N DT+ C+ C A L PS+ P D L H CPW CE ++HFP V L+ +R + L Sbjct: 88 CRPWDRGDFLRRLSTFKAVTWFAKPKIVNPVNCARRGWINVERDTIACEACGARLLFCTPSSWTPQQDEKAAAVFSLKLDHGHKPLCPWKDNICEESLAHFPRVPVPTLIKSYRKRFDALAHL 210 The following BLAST results are available for this feature:
BLAST of NO04G04090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G04090 ID=NO04G04090|Name=NO04G04090|organism=Nannochloropsis oceanica|type=gene|length=1894bpback to top protein sequence of NO04G04090.2 >NO04G04090.2-protein ID=NO04G04090.2-protein|Name=NO04G04090.2|organism=Nannochloropsis oceanica|type=polypeptide|length=390bpback to top protein sequence of NO04G04090.1 >NO04G04090.1-protein ID=NO04G04090.1-protein|Name=NO04G04090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=429bpback to top Synonyms
Publications
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