NO02G05910, NO02G05910 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G05910 vs. NCBI_GenBank
Match: EWM30066.1 (r- vamp71-family [Nannochloropsis gaditana]) HSP 1 Score: 345.9 bits (886), Expect = 1.200e-91 Identity = 192/291 (65.98%), Postives = 208/291 (71.48%), Query Frame = 0
Query: 1 MAILYALVARGKTVLAQFTVRRTAKKRRTGKGVAASGDVHVHSVAHPLPLFLPLVLGTQIISQSTSGNFPTVTRFLLARIGDRGMPHG-GGEAGGQKMSIVYDQHVFHYXXXXXXXXXXXXXXXXXXXXXXXXXCMVDDAENKRRLAFLFLEEVQRRFMSTFGEAAYTAIAFAMNESFSPSLKAMMDFYNADPSADNLRQLRTKIDDTKSVMVENIDQVLARGEKIELLVDKTDRLSQQAVQFKRQSRRLQQSMWWRRLNRSLLLAFVLSLAIFLFTALGCGGFDFHRCKK 291
MAILYALVARGKTVLA+FT STSGNFPTVTRFLLARI D+G+ G GE+ GQKMSI+YDQH+FHY CMVDDAENKRR+AFLFLEEVQRRFM+ +G+ AYTAIAFAMNESFSPSLK+MMDFYNADPSADNL+QLRTKIDDTKSVMVENIDQVL RGEKIELLVDKTDRLSQQAVQFKRQSRRLQQSMWWRRLNR LLL+F L+LA+F T LGCGGFDFH+CKK
Sbjct: 1 MAILYALVARGKTVLAEFT--------------------------------------------STSGNFPTVTRFLLARIEDKGVSQGSNGESSGQKMSIIYDQHIFHY----------LVDGQGHASSPLIYLCMVDDAENKRRMAFLFLEEVQRRFMAAYGDTAYTAIAFAMNESFSPSLKSMMDFYNADPSADNLQQLRTKIDDTKSVMVENIDQVLERGEKIELLVDKTDRLSQQAVQFKRQSRRLQQSMWWRRLNRYLLLSFGLALALFFLTTLGCGGFDFHKCKK 237
BLAST of NO02G05910 vs. NCBI_GenBank
Match: XP_005854856.1 (vesicle-associated membrane protein 7 [Nannochloropsis gaditana CCMP526] >EKU21510.1 vesicle-associated membrane protein 7 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 268.9 bits (686), Expect = 1.900e-68 Identity = 155/245 (63.27%), Postives = 167/245 (68.16%), Query Frame = 0
Query: 1 MAILYALVARGKTVLAQFTVRRTAKKRRTGKGVAASGDVHVHSVAHPLPLFLPLVLGTQIISQSTSGNFPTVTRFLLARIGDRGMPHG-GGEAGGQKMSIVYDQHVFHYXXXXXXXXXXXXXXXXXXXXXXXXXCMVDDAENKRRLAFLFLEEVQRRFMSTFGEAAYTAIAFAMNESFSPSLKAMMDFYNADPSADNLRQLRTKIDDTKSVMVENIDQVLARGEKIELLVDKTDRLSQQAVQFKR 245
MAILYALVARGKTVLA+FT STSGNFPTVTRFLLARI D+G+ G GE+ GQKMSI+YDQH+FHY CMVDDAENKRR+AFLFLEEVQRRFM+ +G+ AYTAIAFAMNESFSPSLK+MMDFYNADPSADNL+QLRTKIDDTKSVMVENIDQVL RGEKIELLVDKTDRLSQQAVQFKR
Sbjct: 1 MAILYALVARGKTVLAEFT--------------------------------------------STSGNFPTVTRFLLARIEDKGVSQGSNGESSGQKMSIIYDQHIFHY----------LVDGQGHASSPLIYLCMVDDAENKRRMAFLFLEEVQRRFMAAYGDTAYTAIAFAMNESFSPSLKSMMDFYNADPSADNLQQLRTKIDDTKSVMVENIDQVLERGEKIELLVDKTDRLSQQAVQFKR 191
BLAST of NO02G05910 vs. NCBI_GenBank
Match: XP_024581300.1 (vesicle-associated membrane [Plasmopara halstedii] >CEG44931.1 vesicle-associated membrane [Plasmopara halstedii]) HSP 1 Score: 185.7 bits (470), Expect = 2.100e-43 Identity = 117/288 (40.62%), Postives = 160/288 (55.56%), Query Frame = 0
Query: 1 MAILYALVARGKTVLAQFTVRRTAKKRRTGKGVAASGDVHVHSVAHPLPLFLPLVLGTQIISQSTSGNFPTVTRFLLARIGDRGMPHGGGEAGGQKMSIVYDQHVFHYXXXXXXXXXXXXXXXXXXXXXXXXXCMVDDAENKRRLAFLFLEEVQRRFMSTFGEAAYTAIAFAMNESFSPSLKAMMDFYNADPSADNLRQLRTKIDDTKSVMVENIDQVLARGEKIELLVDKTDRLSQQAVQFKRQSRRLQQSMWWRRLNRSLLLAFVLSLAIFLFTALGCGGFDFHRC 289
M I+YALV+R KTVLA++T +TSGNFPTVTR LLA+I P+ G +MS VYD+H+FHY CM DD + KRR+ FLFLE+++ RF +T+G+ A TAIAFAMN+ F + ++D+YNA+P AD+L +++ +IDD K +MVENID+VL RGEK ELLVD+TD+L++Q+V+F+R S L ++MW R L L+L I+L A+ C GFDF C
Sbjct: 1 MPIVYALVSREKTVLAEYT--------------------------------------------ATSGNFPTVTRVLLAKI-----PNTAG-----RMSYVYDRHIFHY----------------IVEGGVTYLCMADD-DLKRRVPFLFLEDMKNRFQATYGQHALTAIAFAMNDQFQHEIHRLLDYYNANPDADSLSKVKQQIDDVKDIMVENIDKVLERGEKFELLVDRTDKLNRQSVKFERSSTNLYKTMWRRNLKLWLMLVIFGLFVIYLIIAMAC-GFDFSGC 216
BLAST of NO02G05910 vs. NCBI_GenBank
Match: XP_009033431.1 (hypothetical protein AURANDRAFT_20205 [Aureococcus anophagefferens] >EGB12398.1 hypothetical protein AURANDRAFT_20205 [Aureococcus anophagefferens]) HSP 1 Score: 185.3 bits (469), Expect = 2.800e-43 Identity = 101/225 (44.89%), Postives = 141/225 (62.67%), Query Frame = 0
Query: 65 TSGNFPTVTRFLLARIGDRGMPHGGGEAGGQKMSIVYDQHVFHYXXXXXXXXXXXXXXXXXXXXXXXXXCMVDDAENKRRLAFLFLEEVQRRFMSTFGEAAYTAIAFAMNESFSPSLKAMMDFYNADPSADNLRQLRTKIDDTKSVMVENIDQVLARGEKIELLVDKTDRLSQQAVQFKRQSRRLQQSMWWRRLNRSLLLAFVLSLAIFLFTALGCGGFDFHRCK 290
TSGNFP+VTR LL++I D+ KMS VYDQHVFHY CM D +KRR+AF FLE+ +RRF + +G AA A AF MN F P L+ M FYN+DPS+D L +++T++DD + VMVEN+++VL RGEKIELLVDKTDRL+QQA +F+ S++L+ +++WR++ L A L+ A + +A+ CGG + +C+
Sbjct: 20 TSGNFPSVTRVLLSKITDK----------DSKMSYVYDQHVFHY----------------VTCEGITYLCMADQG-SKRRVAFAFLEDARRRFGAAYGRAARDAPAFTMNADFGPVLQRQMHFYNSDPSSDELAKVKTQLDDVRHVMVENVEKVLERGEKIELLVDKTDRLTQQAFKFENTSKQLRSALFWRKVRMYALFAAALASAALVISAIACGGPHYPKCR 217
BLAST of NO02G05910 vs. NCBI_GenBank
Match: XP_008890041.1 (hypothetical protein PPTG_00403 [Phytophthora parasitica INRA-310] >ETK96912.1 hypothetical protein L915_00462 [Phytophthora parasitica] >ETL50257.1 hypothetical protein L916_00466 [Phytophthora parasitica] >ETM03322.1 hypothetical protein L917_00437 [Phytophthora parasitica] >ETM56583.1 hypothetical protein L914_00461 [Phytophthora parasitica] >ETN23913.1 hypothetical protein PPTG_00403 [Phytophthora parasitica INRA-310] >ETO85890.1 hypothetical protein F444_00486 [Phytophthora parasitica P1976] >ETP26964.1 hypothetical protein F441_00489 [Phytophthora parasitica CJ01A1] >ETP54934.1 hypothetical protein F442_00479 [Phytophthora parasitica P10297] >KUF88158.1 Vesicle-associated membrane protein 7B [Phytophthora nicotianae]) HSP 1 Score: 184.5 bits (467), Expect = 4.700e-43 Identity = 117/288 (40.62%), Postives = 162/288 (56.25%), Query Frame = 0
Query: 1 MAILYALVARGKTVLAQFTVRRTAKKRRTGKGVAASGDVHVHSVAHPLPLFLPLVLGTQIISQSTSGNFPTVTRFLLARIGDRGMPHGGGEAGGQKMSIVYDQHVFHYXXXXXXXXXXXXXXXXXXXXXXXXXCMVDDAENKRRLAFLFLEEVQRRFMSTFGEAAYTAIAFAMNESFSPSLKAMMDFYNADPSADNLRQLRTKIDDTKSVMVENIDQVLARGEKIELLVDKTDRLSQQAVQFKRQSRRLQQSMWWRRLNRSLLLAFVLSLAIFLFTALGCGGFDFHRC 289
M I+YALV+R KTVLA++T +TSGNFPTVTR LLA+I P G +MS VYD+H+FHY CM DD + KRR+ FLFLE+++ RF + +GE A TAIAFAMN+ F ++ ++D+YNA+P AD+L +++ +IDD K +MVENI++VL RGEK ELLVD+TD+L++Q+V+F+R S +L++SMW R + LLL V I+L ++ C GFDF C
Sbjct: 1 MPIVYALVSREKTVLAEYT--------------------------------------------ATSGNFPTVTRVLLAKI-----PPTDG-----RMSYVYDRHIFHY----------------IVEGGVTYLCMADD-DLKRRVPFLFLEDMKNRFQAAYGERALTAIAFAMNDQFQHEIRRLLDYYNANPDADSLSRVKQQIDDVKDIMVENIEKVLDRGEKFELLVDRTDKLNRQSVKFERSSTQLRKSMWRRNVKLWLLLVTVGLFVIYLVISMAC-GFDFSGC 216
BLAST of NO02G05910 vs. NCBI_GenBank
Match: XP_002899366.1 (vesicle-associated membrane protein, putative [Phytophthora infestans T30-4] >EEY62335.1 vesicle-associated membrane protein, putative [Phytophthora infestans T30-4]) HSP 1 Score: 183.7 bits (465), Expect = 8.000e-43 Identity = 116/288 (40.28%), Postives = 163/288 (56.60%), Query Frame = 0
Query: 1 MAILYALVARGKTVLAQFTVRRTAKKRRTGKGVAASGDVHVHSVAHPLPLFLPLVLGTQIISQSTSGNFPTVTRFLLARIGDRGMPHGGGEAGGQKMSIVYDQHVFHYXXXXXXXXXXXXXXXXXXXXXXXXXCMVDDAENKRRLAFLFLEEVQRRFMSTFGEAAYTAIAFAMNESFSPSLKAMMDFYNADPSADNLRQLRTKIDDTKSVMVENIDQVLARGEKIELLVDKTDRLSQQAVQFKRQSRRLQQSMWWRRLNRSLLLAFVLSLAIFLFTALGCGGFDFHRC 289
M I+YALV+R KTVLA++T +TSGNFPTVTR LLA+I P G +MS VYD+H+FHY CM DD + KRR+ FLFLE++++RF S +GE A TAIAFAMN+ F ++ ++D+YNA+P AD+L +++ +IDD K +MVENI++VL RGEK ELLVD+TD+L++Q+V+F+R S +L++S+W R + LLL + I+L ++ C GFDF C
Sbjct: 1 MPIVYALVSREKTVLAEYT--------------------------------------------ATSGNFPTVTRVLLAKI-----PPTDG-----RMSYVYDRHIFHY----------------IVEGGVTYLCMADD-DLKRRVPFLFLEDMKKRFQSAYGERALTAIAFAMNDQFQHEIRHLLDYYNANPDADSLSRVKQQIDDVKDIMVENIEKVLDRGEKFELLVDRTDKLNRQSVKFERSSTQLRKSIWRRNVKLWLLLVGIGLFVIYLVISMAC-GFDFSGC 216
BLAST of NO02G05910 vs. NCBI_GenBank
Match: OQR91263.1 (vesicle-associated membrane protein [Achlya hypogyna]) HSP 1 Score: 183.3 bits (464), Expect = 1.000e-42 Identity = 115/289 (39.79%), Postives = 156/289 (53.98%), Query Frame = 0
Query: 1 MAILYALVARGKTVLAQFTVRRTAKKRRTGKGVAASGDVHVHSVAHPLPLFLPLVLGTQIISQSTSGNFPTVTRFLLARIGDRGMPHGGGEAGGQKMSIVYDQHVFHYXXXXXXXXXXXXXXXXXXXXXXXXXCMVDDAENKRRLAFLFLEEVQRRFMSTFGEAAYTAIAFAMNESFSPSLKAMMDFYNADPSADNLRQLRTKIDDTKSVMVENIDQVLARGEKIELLVDKTDRLSQQAVQFKRQSRRLQQSMWWRRLNRSLLLAFVLSLAIFLFTALGCGGFDFHRCK 290
M I+YAL+ARGKTVLA++T ++SGNFPTVTR LLA+I A KMS VYD+HVFHY CM D+ + KRR+ F FLE++++RF++T+G+ TAIAFAMN F ++ MD++NA P D + Q++ ++DD K MVENI++VL RGEK ELLVD+TD+LSQQ+ F R+SR+L++ MWWR + L V L I+L ++ C GFDF CK
Sbjct: 1 MPIVYALIARGKTVLAEYT--------------------------------------------ASSGNFPTVTRVLLAKI----------PAEDSKMSYVYDKHVFHY----------------VVKDGITYLCMADN-DFKRRVPFQFLEDLKKRFLTTYGDRGRTAIAFAMNAEFQHVIQRQMDYFNAHPDVDTVVQVQQQLDDVKDTMVENIEKVLGRGEKFELLVDRTDQLSQQSFVFNRKSRKLRKVMWWRSMKMWFCLGAVGLLFIYLVISMAC-GFDFSSCK 217
BLAST of NO02G05910 vs. NCBI_GenBank
Match: OWZ13143.1 (Vesicle-associated membrane protein [Phytophthora megakarya]) HSP 1 Score: 181.0 bits (458), Expect = 5.200e-42 Identity = 115/288 (39.93%), Postives = 159/288 (55.21%), Query Frame = 0
Query: 1 MAILYALVARGKTVLAQFTVRRTAKKRRTGKGVAASGDVHVHSVAHPLPLFLPLVLGTQIISQSTSGNFPTVTRFLLARIGDRGMPHGGGEAGGQKMSIVYDQHVFHYXXXXXXXXXXXXXXXXXXXXXXXXXCMVDDAENKRRLAFLFLEEVQRRFMSTFGEAAYTAIAFAMNESFSPSLKAMMDFYNADPSADNLRQLRTKIDDTKSVMVENIDQVLARGEKIELLVDKTDRLSQQAVQFKRQSRRLQQSMWWRRLNRSLLLAFVLSLAIFLFTALGCGGFDFHRC 289
M I+YALV+R KTVLA++T +TSGNFPTVTR LLA+I P G +MS VYD+H+FHY CM DD + KRR+ FLFLE+++ RF + +GE A TAIAFAMN+ F ++ ++D+YNA+P AD+L +++ +IDD K +MVENI++VL RGEK ELLVD+TD+L++Q+V+F+ ++SMW R + LLL FV I+L ++ C GFDF C
Sbjct: 1 MPIVYALVSREKTVLAEYT--------------------------------------------ATSGNFPTVTRVLLAKI-----PTNDG-----RMSYVYDRHIFHY----------------IVEGGITYLCMADD-DLKRRVPFLFLEDMKNRFQAAYGERALTAIAFAMNDQFQHEIRRLLDYYNANPDADSLSRVKQQIDDVKDIMVENIEKVLDRGEKFELLVDRTDKLNRQSVKFEXXXXXXRKSMWRRNVKLWLLLVFVGLFVIYLVISMAC-GFDFSGC 216
BLAST of NO02G05910 vs. NCBI_GenBank
Match: POM64952.1 (Vesicle-associated membrane protein [Phytophthora palmivora var. palmivora]) HSP 1 Score: 180.3 bits (456), Expect = 8.900e-42 Identity = 115/288 (39.93%), Postives = 158/288 (54.86%), Query Frame = 0
Query: 1 MAILYALVARGKTVLAQFTVRRTAKKRRTGKGVAASGDVHVHSVAHPLPLFLPLVLGTQIISQSTSGNFPTVTRFLLARIGDRGMPHGGGEAGGQKMSIVYDQHVFHYXXXXXXXXXXXXXXXXXXXXXXXXXCMVDDAENKRRLAFLFLEEVQRRFMSTFGEAAYTAIAFAMNESFSPSLKAMMDFYNADPSADNLRQLRTKIDDTKSVMVENIDQVLARGEKIELLVDKTDRLSQQAVQFKRQSRRLQQSMWWRRLNRSLLLAFVLSLAIFLFTALGCGGFDFHRC 289
M I+YALV+R KTVLA++T +TSGNFPTVTR LLA+I P G +MS VYD+H+FHY CM DD + KRR+ FLFLE+++ RF + +GE A TAIAFAMN+ F ++ ++D+YNA P AD+L +++ +IDD K +MVENI++VL RGEK ELLVD+TD+L++Q+V+F+ ++SMW R + LLL FV I+L ++ C GFDF C
Sbjct: 1 MPIVYALVSREKTVLAEYT--------------------------------------------ATSGNFPTVTRVLLAKI-----PTSDG-----RMSYVYDRHIFHY----------------IVEGGVTYLCMADD-DLKRRVPFLFLEDMKNRFQAAYGERALTAIAFAMNDQFQHEIRRLLDYYNAHPDADSLSRVKQQIDDVKDIMVENIEKVLDRGEKFELLVDRTDKLNRQSVKFEXXXXXXRKSMWRRNVKLWLLLVFVGLFVIYLVISMAC-GFDFSGC 216
BLAST of NO02G05910 vs. NCBI_GenBank
Match: XP_008611519.1 (hypothetical protein SDRG_07463 [Saprolegnia diclina VS20] >EQC35235.1 hypothetical protein SDRG_07463 [Saprolegnia diclina VS20]) HSP 1 Score: 179.9 bits (455), Expect = 1.200e-41 Identity = 112/289 (38.75%), Postives = 155/289 (53.63%), Query Frame = 0
Query: 1 MAILYALVARGKTVLAQFTVRRTAKKRRTGKGVAASGDVHVHSVAHPLPLFLPLVLGTQIISQSTSGNFPTVTRFLLARIGDRGMPHGGGEAGGQKMSIVYDQHVFHYXXXXXXXXXXXXXXXXXXXXXXXXXCMVDDAENKRRLAFLFLEEVQRRFMSTFGEAAYTAIAFAMNESFSPSLKAMMDFYNADPSADNLRQLRTKIDDTKSVMVENIDQVLARGEKIELLVDKTDRLSQQAVQFKRQSRRLQQSMWWRRLNRSLLLAFVLSLAIFLFTALGCGGFDFHRCK 290
M I+YAL+ARGKTVLA++T ++SGNFPTVTR LLA+I KMS VYD+HVFHY CM D+ + KRR+ F FL++++ RF++T+G+ TAIAFAMN F ++ MD++NA+P D + Q++ +DD K MVENI++VL RGEK ELLVD+TD+LSQQ+ F R+SR+L++ MWWR + + L + L I+L ++ C GFDF CK
Sbjct: 1 MPIVYALIARGKTVLAEYT--------------------------------------------ASSGNFPTVTRVLLAKI----------PVDDSKMSYVYDKHVFHY----------------VVKDGITYLCMADN-DFKRRVPFQFLDDLKARFLTTYGDRGRTAIAFAMNAEFQHVIQRQMDYFNANPDVDTVVQVQQTLDDVKDTMVENIEKVLGRGEKFELLVDRTDQLSQQSFVFNRKSRKLRKVMWWRSMKMWVCLGCLGLLVIYLVISMAC-GFDFSSCK 217 The following BLAST results are available for this feature:
BLAST of NO02G05910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G05910 ID=NO02G05910|Name=NO02G05910|organism=Nannochloropsis oceanica|type=gene|length=1941bpback to top protein sequence of NO02G05910.5 >NO02G05910.5-protein ID=NO02G05910.5-protein|Name=NO02G05910.5|organism=Nannochloropsis oceanica|type=polypeptide|length=195bpback to top protein sequence of NO02G05910.4 >NO02G05910.4-protein ID=NO02G05910.4-protein|Name=NO02G05910.4|organism=Nannochloropsis oceanica|type=polypeptide|length=191bpback to top protein sequence of NO02G05910.3 >NO02G05910.3-protein ID=NO02G05910.3-protein|Name=NO02G05910.3|organism=Nannochloropsis oceanica|type=polypeptide|length=291bpback to top protein sequence of NO02G05910.2 >NO02G05910.2-protein ID=NO02G05910.2-protein|Name=NO02G05910.2|organism=Nannochloropsis oceanica|type=polypeptide|length=195bpback to top protein sequence of NO02G05910.1 >NO02G05910.1-protein ID=NO02G05910.1-protein|Name=NO02G05910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=247bpback to top Synonyms
Publications
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