NO02G05140, NO02G05140 (gene) Nannochloropsis oceanica

Overview
NameNO02G05140
Unique NameNO02G05140
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4131
Alignment locationchr2:1373671..1377801 +

Link to JBrowse

Properties
Property NameValue
DescriptionS-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1373671..1377801 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008173RNA methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR010280U5_MeTrfase_fam
Homology
BLAST of NO02G05140 vs. NCBI_GenBank
Match: EWM30108.1 (hypothetical protein Naga_100310g5 [Nannochloropsis gaditana])

HSP 1 Score: 797.0 bits (2057), Expect = 5.200e-227
Identity = 383/515 (74.37%), Postives = 435/515 (84.47%), Query Frame = 0
Query:  242 PKKIGPISEEVGQHLTPKMYAPREAFDIDARPNSRKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDQRRDRKQKAAVDEKMRRLKVQRFGKEGLLFKDGQAGGREGGGKDDLLQCEHFGACSGCFFRSGFTETPLMEDARVFFRRVARYENFNLGLATGIHDWRTQAKLAIAPLSKWGGCRIGLYEEGTHRVLPIPNCRVHHPSINHAVDIITQATELVKTRAFDQDSLSGSLRYIQCAVERRTGKIQLTLVWNAPGRKEASAELSRLLKALKAADPAQELWHSIWVNYRTGPGNTIFARDPRSWSKVQGLDYLTEKIGPSQVLFYLTPQLFRQGNLEGFGKVVERAQDFVPEQSVVCELYGGVGVIGLNMLGKVSALRFSDINPFLEGCVMKTLDALPEKRREKVSFMVATALEGLEAGQADGADVLIVDPPRKGLEAEVMTHLVDRKDPLAGSLKRIVYVSCGFDALKRDAVALMDSGWRLVHAEGFVLFPGSDHLETLAIFDRGR 757
            P+  GPISE VGQHLTP+  AP E FD+DARPNS+KA                                  + QRR+++Q+AA+DEKMRR+K+QRFGKEGLLFKDG AGG+ GGG+DD LQCEHFGACSGCF+RSG  ETP+ME+ARVFF+RVARY+NF+LGLATG+H WRTQAKLA+APLSKWGGC++GLYEEG+HRVLPIPNCRVHHPSIN AV ++T+AT  +KTRAFD  SL GSLRY+Q AVERRTG+IQLTLVWNAPG+KEA  ELSRLLKALKAAD + ELWHSIWVN+RTGPGNTIFAR+ RSW+K+ G D+LTEKIGPSQ LFYLTPQLFRQGNL+GF K+V RAQ+FVP QSVVCELYGG GVIGLNMLGK +ALRFSDINP+L  CV KTL ALP K+REKVSF++ATALE LEAG ADGA VLIVDPPRKGLE+EV+ HLVDRKDP AG+L+RIVYVSCGF+ALKRDAVALMDSGWRLVHAEGFVLFPGSDHLETLA+FDR R
Sbjct:  140 PRGSGPISEAVGQHLTPEAAAPPEIFDVDARPNSQKA--RKVASSQSQGKGHREEGLEEDNGAGGWQRPSRVQQRREKRQQAAMDEKMRRVKIQRFGKEGLLFKDGLAGGQAGGGRDDALQCEHFGACSGCFYRSGLVETPVMENARVFFQRVARYDNFSLGLATGVHGWRTQAKLAVAPLSKWGGCQLGLYEEGSHRVLPIPNCRVHHPSINRAVQVLTEATVTMKTRAFDPASLGGSLRYVQVAVERRTGRIQLTLVWNAPGKKEAGGELSRLLKALKAADASGELWHSIWVNFRTGPGNTIFAREARSWTKLFGADFLTEKIGPSQTLFYLTPQLFRQGNLDGFEKLVTRAQEFVPAQSVVCELYGGGGVIGLNMLGKAAALRFSDINPYLGQCVDKTLQALPAKKREKVSFIIATALEALEAGHADGATVLIVDPPRKGLESEVLAHLVDRKDPYAGTLRRIVYVSCGFEALKRDAVALMDSGWRLVHAEGFVLFPGSDHLETLAVFDRTR 652          
BLAST of NO02G05140 vs. NCBI_GenBank
Match: XP_005855555.1 (hypothetical protein NGA_0593800 [Nannochloropsis gaditana CCMP526] >EKU20804.1 hypothetical protein NGA_0593800 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 795.4 bits (2053), Expect = 1.500e-226
Identity = 382/515 (74.17%), Postives = 434/515 (84.27%), Query Frame = 0
Query:  242 PKKIGPISEEVGQHLTPKMYAPREAFDIDARPNSRKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDQRRDRKQKAAVDEKMRRLKVQRFGKEGLLFKDGQAGGREGGGKDDLLQCEHFGACSGCFFRSGFTETPLMEDARVFFRRVARYENFNLGLATGIHDWRTQAKLAIAPLSKWGGCRIGLYEEGTHRVLPIPNCRVHHPSINHAVDIITQATELVKTRAFDQDSLSGSLRYIQCAVERRTGKIQLTLVWNAPGRKEASAELSRLLKALKAADPAQELWHSIWVNYRTGPGNTIFARDPRSWSKVQGLDYLTEKIGPSQVLFYLTPQLFRQGNLEGFGKVVERAQDFVPEQSVVCELYGGVGVIGLNMLGKVSALRFSDINPFLEGCVMKTLDALPEKRREKVSFMVATALEGLEAGQADGADVLIVDPPRKGLEAEVMTHLVDRKDPLAGSLKRIVYVSCGFDALKRDAVALMDSGWRLVHAEGFVLFPGSDHLETLAIFDRGR 757
            P+  GPISE VGQHLTP+  AP E FD+DARPNS+KA                                  + QRR+++Q+AA+DEKMRR+K+QRFGKEGLLFKDG AGG+ GGG+DD LQCEHFGACSGCF+RSG  ETP+ME+ARVFF+RVARY+NF+LGLATG+H WRTQAKLA+APLSKWGGC++GLYEEG+HRVLPIPNCRVHHPSIN AV ++T+AT  +KTRAFD  SL GSLRY+Q AVERRTG+IQLTLVWNAPG+KEA  ELSRLLKALKAAD + ELWHSIWVN+RTGPGNTIFAR+ RSW+K+ G D+LTEKIGPSQ LFYLTPQLFRQGNL+GF K+V RAQ+FVP QSVVCELYGG GVIGLNMLGK +ALRFSDINP+L  CV KTL  LP K+REKVSF++ATALE LEAG ADGA VLIVDPPRKGLE+EV+ HLVDRKDP AG+L+RIVYVSCGF+ALKRDAVALMDSGWRLVHAEGFVLFPGSDHLETLA+FDR R
Sbjct:  132 PRGSGPISEAVGQHLTPEAAAPPEIFDVDARPNSQKA--RKVASSQSQGKGHREEGLEEENGAGVWQRPSRVQQRREKRQQAAMDEKMRRVKIQRFGKEGLLFKDGLAGGQAGGGRDDALQCEHFGACSGCFYRSGLVETPVMENARVFFQRVARYDNFSLGLATGVHGWRTQAKLAVAPLSKWGGCQLGLYEEGSHRVLPIPNCRVHHPSINRAVQVLTEATVTMKTRAFDPASLGGSLRYVQVAVERRTGRIQLTLVWNAPGKKEAGGELSRLLKALKAADTSGELWHSIWVNFRTGPGNTIFAREARSWTKLFGADFLTEKIGPSQTLFYLTPQLFRQGNLDGFEKLVTRAQEFVPAQSVVCELYGGGGVIGLNMLGKAAALRFSDINPYLGQCVDKTLQVLPAKKREKVSFIIATALEALEAGHADGATVLIVDPPRKGLESEVLAHLVDRKDPYAGTLRRIVYVSCGFEALKRDAVALMDSGWRLVHAEGFVLFPGSDHLETLAVFDRTR 644          
BLAST of NO02G05140 vs. NCBI_GenBank
Match: CBJ30020.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 421.4 bits (1082), Expect = 5.900e-114
Identity = 203/409 (49.63%), Postives = 272/409 (66.50%), Query Frame = 0
Query:  359 DLLQCEHFGACSGCFFRSGFTETPLMEDARVFFRRVARYENFNLGLATGI-------------HDWRTQAKLAIAPLSKWGGCRIGLYEEGTHRVLPIPNCRVHHPSINHAVDIITQATELVKTRAFDQDSLSGSLRYIQCAVERRTGKIQLTLVWNAPGRKEASAELSRLLKALKAADPAQELWHSIWVNYRTGPGNTIFARDPRSWSKVQGLDYLTEKIGPSQVLFYLTPQLFRQGNLEGFGKVVERAQDFVPEQSVVCELYGGVGVIGLNMLGKVSALRFSDINPFLEGCVMKTLDALPEKRREKVSFMVATALEGLEAGQADGADVLIVDPPRKGLEAEVMTHLVDRKDPLAGSLKRIVYVSCGFDALKRDAVALMDSGWRLVHAEGFVLFPGSDHLETLAIFDR 755
            D L+C HF AC+GC F   F ETP+M D+  F   +        G A                H WRT AKLA  P+SKW G  +GLY  G+H V+ IP+CRVHHPS+N AV  + ++T+ +    F Q++L G LRY+Q AVER +G++QLTLVWN    ++A+ +L  L K L+++ P  EL+HSIWVN+R G GN IF+RDP SW +  G +YL E +GPS++ F+ +P LFRQGNL+ F  +V+   D+VPE S VCELY GVGV+GLN+  K + +R SD+N F      ++   LP   R++VSF   +A E +E G+++G +VLIVDPPRKGL+  VM  L+D  DP   +L+R++YVSCGFDALKRDA+ L+ +GW L H+EGFVLFPGSDH+ET AIFDR
Sbjct:  110 DELKCRHFKACAGCVFDRRFDETPIMVDSSSFMDSLHSTGARARGGAKAASDFEPHVIHPWKPHGWRTLAKLAARPVSKWRGVELGLYSAGSHNVIGIPDCRVHHPSVNLAVKTLQESTKKIGVTGFRQENLDGDLRYVQMAVERTSGQVQLTLVWNEENYRDATPKLQLLAKDLRSSRP--ELFHSIWVNFRVGVGNAIFSRDPHSWHRCSGPEYLKEVVGPSKIPFFFSPPLFRQGNLDHFESIVQAVVDWVPEGSGVCELYAGVGVLGLNVAAKAAFVRCSDVNSFNPRSFERSRKTLPPNVRKRVSFEAMSADEAMEDGESEGCEVLIVDPPRKGLDKGVMDALMDPDDPNTEALRRVIYVSCGFDALKRDAMNLIGAGWVLRHSEGFVLFPGSDHIETFAIFDR 516          
BLAST of NO02G05140 vs. NCBI_GenBank
Match: XP_005828415.1 (hypothetical protein GUITHDRAFT_48183, partial [Guillardia theta CCMP2712] >EKX41435.1 hypothetical protein GUITHDRAFT_48183, partial [Guillardia theta CCMP2712])

HSP 1 Score: 358.2 bits (918), Expect = 6.200e-95
Identity = 181/401 (45.14%), Postives = 248/401 (61.85%), Query Frame = 0
Query:  361 LQCEHFGACSGCFFRSGFTETPLMEDARVFF----RRVARYENFNLGLATGIHDWRTQAKLAIAPLSKWGGCRIGLYEEGTHRVLPIPNCRVHHPSINHAVDIITQATELVKTRAFDQDSLSGSLRYIQCAVERRTGKIQLTLVWNAPGRKEASAELSRLLKALKAADPAQELWHSIWVNYRTGPGNTIFARDPRSWSKVQGLDYLTEKIGPS-QVLFYLTPQLFRQGNLEGFGKVVERAQDFVPEQSVVCELYGGVGVIGLN-MLGKVSALRFSDINPFLEGCVMKTLDALPEKRREKVSFMVATALEGLEAGQADGADVLIVDPPRKGLEAEVMTHLVDRKDPLAGSLKRIVYVSCGFDALKRD-AVALMDSGWRLVHAEGFVLFPGSDHLETLAIFDR 755
            L+C HFGAC GC   +   +TP + +A++F     ++  R    N+G    IH WRT AKLA++P +   G  IGLY+ GTH VL IP CRVHHPSIN AV I+ +    V  +A+D+ S  G LRY+Q  VER + K+Q+T+VWNA   ++AS +   L+K LK  D    ++HSIW+NYRTG GN IF RD + W  + G  Y+ E+I     + F + P +FRQGNLE F  ++++ + F+   S VCELY G G++GL+  L     LR SD NP      + T  +LP   + K  +  ++A E +E GQ DGADVLIVDPPRKGL  E++ H +  K P    LK+++Y+SCGF ALK D  V L  + W+L HAEG VLFPGSDH+E L + ++
Sbjct:    2 LRCVHFGACPGCIVEANLHDTPTINEAKMFLGALTKQAGREFEVNMG---QIHRWRTLAKLAVSPTNNEMGFEIGLYKSGTHDVLAIPRCRVHHPSINEAVSILQEEMLAVGIQAYDEKSSEGHLRYVQMMVERHSNKVQMTMVWNAENFRDASPQAQLLVKRLKLYD----IFHSIWINYRTGTGNVIFNRDEKKWQLLIGPKYVAERIEAGLNLSFPIAPSMFRQGNLEQFTAIIQKVETFIEPGSKVCELYAGAGMVGLSAALQNCEWLRCSDENPANLDAFLATKQSLPIDLKRKAYYTTSSAEEAIEDGQVDGADVLIVDPPRKGL--ELLAHWIQSKSPT--ELKKVIYISCGFKALKEDLKVMLSGNKWKLTHAEGHVLFPGSDHIECLVVLEK 391          
BLAST of NO02G05140 vs. NCBI_GenBank
Match: XP_002181505.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46719.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 339.0 bits (868), Expect = 3.900e-89
Identity = 194/482 (40.25%), Postives = 256/482 (53.11%), Query Frame = 0
Query:  363 CEHFGACSGCFFRSGFTETPLMEDARVFFRRVA----RYENFNLGLATGIHD----------------WRTQAKLAIAP-LSKWG--GCRIGLYEEGTHRVLPIPNCRVHHPSINHAVDIITQATELVKTRAFDQDSLSGSLRYIQCAVERRTGKIQLTLVWNAPGRKEASAELSRLLKALKAADPAQELWHSIWVNYRTGPGNTIFARDPRSWSKVQGLDYLTEKIG-PSQVLFYLTPQLFRQGNLEGFGKVVERAQDFVPEQSVVCELYGGVGVIGLNMLGKVSA-------LRFSDINPFLEGCVMKTLDALP--------------------------------------EKRREKVSFMVATALEGLEAGQADGADVLIVDPPRKGLEAEVMTHL-------------------VDRKDPLAGSLKRIVYVSCGFDALKRDAVALMDS--GWRLVHAEGFVLFPGSDHLETLAIFDR 755
            CEHFG+CSGC          +++ A+++F   A    R++    GL   + D                WRTQAKLA+AP  S W   GC  GLY+ GTH VL IP+C VHHP+IN A+D +  AT    T AF +D+  G LRY+Q  VER T K+ LTLVWNA   KE    L+RL+K L+  +P  +LWHS+W +   G GN IFAR+PR W ++ G++Y+ E I   +Q   Y +P  FRQGNL+GF  +       VP  S VCELY GVG++GL  L  ++        +R SD NP    C  +++++LP                                      E   EK S+MVATA + L+ G+A GADV+IVDPPRKGLE EV+  L                    D K      ++ ++YVSCGFDAL RD+  L+ S  GW L  A G++LFPGSDH+ETL IF R
Sbjct:  125 CEHFGSCSGCVRDDQVGSVDVIQSAKLYFSSTAVRKKRHDVLTQGLDWAVEDQDDGFYQVVVPSAVRGWRTQAKLAVAPKSSSWARDGCEFGLYQRGTHDVLAIPSCEVHHPAINRALDALRLATAKTGTAAFAKDTRDGGLRYVQLQVERPTQKVSLTLVWNAELLKETQPALARLVKELQTREP--DLWHSMWCHCNNGIGNNIFARNPRRWHRLSGMEYMREPIAVGNQGWLYFSPLTFRQGNLDGFDVLATDVARAVPGGSKVCELYAGVGLLGLTTLAHLAKEGTPLEWIRCSDENPSNPRCFQRSIESLPLEVTGLDRRTNRKSKEDQGMTLAELADLIEAGESSSRSENDMEKASYMVATAAQALQRGEALGADVIIVDPPRKGLEDEVLESLCQPYKADQPYVESVNLLTIADDKVNWTNDVETLIYVSCGFDALARDSQRLLSSAGGWTLHSATGYLLFPGSDHVETLCIFKR 604          
BLAST of NO02G05140 vs. NCBI_GenBank
Match: GAX21136.1 (methyltransferase-like protein 6 [Fistulifera solaris])

HSP 1 Score: 327.0 bits (837), Expect = 1.500e-85
Identity = 190/491 (38.70%), Postives = 256/491 (52.14%), Query Frame = 0
Query:  358 DDLLQCEHFGACSGCFFRSGFTETPLMEDARVFFR----RVARYENFNLGL----------------ATGIHDWRTQAKLAIAPLSK-WG--GCRIGLYEEGTHRVLPIPNCRVHHPSINHAVDIITQATELVKTRAFDQDSLSGSLRYIQCAVERRTGKIQLTLVWNAPGRKEASAELSRLLKALKAADPAQELWHSIWVNYRTGPGNTIFARDPRSWSKVQGLDYLTEKI-GPSQVLFYLTPQLFRQGNLEGFGKVVERAQDFVPEQSVVCELYGGVGVIGLNML----------GKVSALRFSDINPFLEGCVMKTLDALP---------------------------------------EKRREKVSFMVATALEGLEAGQADGADVLIVDPPRKGLEAEVMTHL-------------------VDRKDPLAGSLKRIVYVSCGFDALKRDAVALMDS--GWRLVHAEGFVLFPGSDHLETLAIFDR 755
            ++ + C+HF  CSGC          +++ A+ +F     R  R +  + GL                 + +  WRTQAKLA+AP S  W   GC+ GL+ +GTH VL IP+C VHHPSIN AV  + +ATE +   A+ +++    LRY+Q  VER TGKI LTL+WNA   K+    LSRL+K L+A  P  ELWHS W +     GN IF+R+PR W ++ G +++ E I    Q   Y +P  FRQGNL+GF  + E     +P  S VCELY GVG++GL  L            +  +R SD NP    C  + +D+LP                                       + +RE+ S++VA+A + L+AGQA GA VLIVDPPRKGLE+EV+  L                    D K      ++ ++YVSCGFDAL RD   L+ S  GW L  A G+VLFPGSDH+ETLAIF R
Sbjct:   14 EEAIGCKHFQECSGCVVDQNVAAVSVVQSAKFYFSSTSVRRKRVDILDRGLPFATEEKDDGFYKVVVPSKVQAWRTQAKLAVAPKSSTWSKDGCQFGLFRQGTHTVLEIPDCTVHHPSINRAVHALVEATEKLGIAAYQENTRDYGLRYVQFQVERVTGKICLTLIWNAETLKQTQPALSRLIKELEAKQP--ELWHSFWCHCNDSTGNNIFSRNPRRWHRISGPEFIREPIPATDQGWLYFSPLTFRQGNLDGFDIIAEDVARAIPGGSKVCELYAGVGLLGLTALSYHANEENGSAPLPWIRCSDENPSNSRCFYRAVDSLPLHVSGRGVGQMQDDSDEKFLTLAELAAMVESGKTPPISQDSKREEPSYLVASAGQALKAGQALGAQVLIVDPPRKGLESEVLDELCKPFNPNQPYVERSTFLTMFDDKVNWVNDVETLIYVSCGFDALARDCERLLSSPAGWVLQSATGYVLFPGSDHVETLAIFKR 502          
BLAST of NO02G05140 vs. NCBI_GenBank
Match: GAX12257.1 (methyltransferase-like protein 6 [Fistulifera solaris])

HSP 1 Score: 326.6 bits (836), Expect = 2.000e-85
Identity = 194/491 (39.51%), Postives = 256/491 (52.14%), Query Frame = 0
Query:  358 DDLLQCEHFGACSGCFFRSGFTETPLMEDARVFFR----RVARYENFNLGL----------------ATGIHDWRTQAKLAIAPLSK-WG--GCRIGLYEEGTHRVLPIPNCRVHHPSINHAVDIITQATELVKTRAFDQDSLSGSLRYIQCAVERRTGKIQLTLVWNAPGRKEASAELSRLLKALKAADPAQELWHSIWVNYRTGPGNTIFARDPRSWSKVQGLDYLTEKI-GPSQVLFYLTPQLFRQGNLEGFGKVVERAQDFVPEQSVVCELYGGVGVIGLNML----------GKVSALRFSDINPFLEGCVMKTLDALP----------------EK-----------------------RREKVSFMVATALEGLEAGQADGADVLIVDPPRKGLEAEVMTHL-------------------VDRKDPLAGSLKRIVYVSCGFDALKRDAVALMDS--GWRLVHAEGFVLFPGSDHLETLAIFDR 755
            ++ + C+HF  CSGC          +++ A+ +F     R  R +  N GL                 + +  WRTQAKLA+AP S  W   GC+ GL+ +GTH VL IP+C VHHPSIN AV  +  ATE +   A+ + +    LRY+Q  VER TGKI LTL+WNA   K+    LSRL+K L+A +P  +LWHS W +     GN IF+R+PR W ++ G +++ E I    Q   Y +P  FRQGNL+GF  + E     +P  S VCELY GVGV+GL  L            +  +R SD NP    C  + +D+LP                EK                       +RE+ S++VA+A + L+AGQA GA VLIVDPPRKGLEAEV+  L                    D K      ++ ++YVSCGFDAL RD   L+ S  GW L  A G+VLFPGSDH+ETLAIF R
Sbjct:   14 EEAIGCKHFQDCSGCVVDQNVAAVGVVQSAKFYFSSTSVRRKRVDVLNRGLPFATEEKDDGFYKVVVPSKVQAWRTQAKLAVAPKSSTWSKDGCQFGLFRQGTHTVLEIPDCAVHHPSINRAVHALVDATEKLGIAAYQETTREYGLRYVQFQVERVTGKICLTLIWNAETLKQTQPALSRLIKELEAKEP--DLWHSFWCHCNDSTGNNIFSRNPRRWHRIAGPEFIREPIPATDQGWLYFSPLTFRQGNLDGFDILAEDVARAIPGGSKVCELYAGVGVLGLTALSYHANEENGSSPLPWIRCSDENPSNSRCFYRAVDSLPLNVSGRGVGQMQGDSDEKFLTLAELASMVESGKTPPTSQGSKREEPSYLVASAGQALKAGQALGAQVLIVDPPRKGLEAEVLDELCKPFNSNQPYVERSTFLTMFDDKVNWVNDVETLIYVSCGFDALARDCECLLSSPAGWVLQSATGYVLFPGSDHVETLAIFKR 502          
BLAST of NO02G05140 vs. NCBI_GenBank
Match: XP_002289574.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93111.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 317.0 bits (811), Expect = 1.600e-82
Identity = 189/533 (35.46%), Postives = 252/533 (47.28%), Query Frame = 0
Query:  361 LQCEHFGACSGCFFRSGFTETPLMEDARVFF-----------------------------RRVARYENFNLGLATGIHDWRTQAKLAIAPLSKWG---GCRIGLYEEGTHRVLPIPNCRVHHPSINHAVDIITQATELVKTRAFDQDSLSGSLRYIQCAVERRTGKIQLTLVWNAPGRKEASAELSRLLKALKAADPAQELWHSIWVNYRTGPGNTIFARDPRSWSKVQGLDYLTEKIGPS---------QVLFYLTPQLFRQGNLEGFGKVVERAQDFVPEQSVVCELYGGVGVIGLNML--------------GKVSALRFSDINPFLEGCVMKTLDALPEK--------------------------------------------------------------RREKVSFMVATALEGLEAGQADGADVLIVDPPRKGLEAEV--------------------MTHLVDRKDPLAGSLKRIVYVSCGFDALKRDAVALMDS--GWRLVHAEGFVLFPGSDHLETLAIFDR 755
            + C HFG C GC      T+  ++E A+++F                                                WRTQAKLA+AP S W    GC++GLYE  +H VL IP+C VHHPSIN AV++I +AT+ V+T AF +D+  G LRY+Q  VE  TGKI LTLV NA   KE    LS L+K LK  D  +E+WHSIW +     GN IF+RD   W  ++G  Y+ EKI  S         + L Y +P +FRQGNLEGFGK+ +  ++ +P  S VCELY GVG++GL+ L              G +  LR SD NP  E C  + ++++P K                                                                E+V++M A A   L  GQA GADVLIVDPPRKGL+  V                    ++HL          ++ ++YVSCGFDAL RD   ++ S  GW+L  A G+VLFPGS+H+ET+ +F R
Sbjct:  148 IDCPHFGTCPGCVVNEDITKIDIIESAKLYFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWRTQAKLAVAPSSTWSRAQGCKLGLYERYSHNVLSIPDCAVHHPSINRAVEMIVEATKKVRTPAFTEDTGEGLLRYVQLQVELSTGKICLTLVMNAEKLKECQPHLSFLVKELKRMDDKKEVWHSIWCHCNESKGNAIFSRDSSHWHPLEGPPYIREKIPGSNPNDDPEVKEGLLYFSPMVFRQGNLEGFGKIAKEVRESIPRGSKVCELYAGVGLLGLSSLLYHGKLDEGGEDGEGGLPWLRCSDENPENERCFERAVNSMPMKITGRTPRSFKDGGKTXXXXXXXXXXXXXXXXXXXXGEISMQELMDRISNSESYDNSRGSTTDPSERVTYMKANAASALFKGQALGADVLIVDPPRKGLDEPVIQQLCQPYNAIQPYVESPTMLSHLARHTINWTNDVRTLIYVSCGFDALARDCDQILSSSAGWKLESATGYVLFPGSNHVETVVVFRR 680          
BLAST of NO02G05140 vs. NCBI_GenBank
Match: OEU17615.1 (hypothetical protein FRACYDRAFT_225346 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 309.3 bits (791), Expect = 3.300e-80
Identity = 188/492 (38.21%), Postives = 250/492 (50.81%), Query Frame = 0
Query:  363 CEHFGACSGCFFRSGFTETPLMEDARVFFRRVARYEN--------------------FNLGLATGIHDWRTQAKLAIAPLS--KW--GGCRIGLYEEGTHRVLPIPNCRVHHPSINHAVDIITQATELVKTRAFDQDSLSGSLRYIQCAVERRTGKIQLTLVWNAPGRKEASAELSRLLKALKAADPAQELWHSIWVNYRTGPGNTIFARDPRSWSKVQGLDYLTEKIGPSQV-LFYLTPQLFRQGNLEGFGKVVERAQDFVPEQSVVCELYGGVGVIGLNML------------------GKVSALRFSDINPFLEGCVMKTLDALPEK-----RRE-------------------------------KVSFMVATALEGLEAGQADGADVLIVDPPRKGLEAEVMTHL----------VDRKDPL---------AGSLKRIVYVSCGFDALKRDAVALMDS--GWRLVHAEGFVLFPGSDHLETLAIFDR 755
            CEHF +C GC   +   ET ++  A  FF   +  +N                    + + + T   +WRTQAKL  A  S  +W   GC  GLY+ GTH V+ IPNC+VHHPSIN A+  + +AT    T A+  D  +G LRY+Q  VER TGKI LT+VWN    KE    LSRL K L   +P  +LWHS+W +   G GN IF R PR+W ++ G +++ E I    +   Y +P  FRQGN++GF  +       V   S VCELY GVG++GL+ L                    ++ +R SD NP    C   +L +LP+K     R+E                               K S+MVA+A E L+AGQA GAD+LIVDPPRKGLE  V+  L          V+  D L            ++ ++YVSCGFDAL RD   L+ S  GW+L  A G++LFPGS+H+ETL IF R
Sbjct:  115 CEHFDSCPGCVTNTNVGETDIVRSAARFFSSTSIRKNRLDVERSGEDWVVEAEEDGFYEVVVPTETSEWRTQAKLVAASKSGGQWTKEGCIFGLYQRGTHNVISIPNCKVHHPSINRAILALEKATAKTGTHAY-SDEWTGGLRYVQLQVERTTGKICLTVVWNESELKETHPYLSRLTKELSKIEP--DLWHSMWCHCNDGTGNNIFTRSPRNWHRLSGPEFVREPIPVGDLGWLYFSPLAFRQGNIDGFDIIANDVARAVAPGSKVCELYAGVGMLGLSALIFHHNNHEYYRDRVEGYSEPLTWIRCSDENPANPRCFSASLRSLPQKITEYPRKEEEQKTVTLGDLMKTMEAGGDYEGEAADRTGPKASYMVASAAEALKAGQALGADILIVDPPRKGLEDYVLDELCKPFNPKQPCVESSDMLTVPDHLVNWVNDVQTLIYVSCGFDALARDCEKLLSSGGGWKLESATGYILFPGSNHVETLCIFRR 603          
BLAST of NO02G05140 vs. NCBI_GenBank
Match: EJK49064.1 (hypothetical protein THAOC_32095 [Thalassiosira oceanica])

HSP 1 Score: 294.3 bits (752), Expect = 1.100e-75
Identity = 179/493 (36.31%), Postives = 247/493 (50.10%), Query Frame = 0
Query:  375 RSGFTETPLMEDARVFF-------------RRVARYENFNLGLATGIHDWRTQAKLAIAPLSKW---GGCRIGLYEEGTHRVLPIPNCRVHHPSINHAVDIITQATELVKTRAFDQDSLSGSLRYIQCAVERRTGKIQLTLVWNAPGRKEASAELSRLLKALKAADPAQELWHSIWVNYRTGPGNTIFARDPRSWSKVQGLDYLTEKIGPS-----QVLFYLTPQLFRQGNLEGFGKVVERAQDFVPEQSVVCELYGGVGVIGLNML---GKVSA-----------LRFSDINPFLEGCVMKTLDALPE--------------------------------------------------------KRREKVSFMVATALEGLEAGQADGADVLIVDPPRKGLEAEVMTHLVDRKDP--------------------LAGSLKRIVYVSCGFDALKRDAVALMDS--GWRLVHAEGFVLFPGSDHLETLAIFDR 755
            +S   E  ++E AR++F             RR   +  F + + + I  WR+QAKLA++P S W    GC+IGLY  G+H V+PIP+C  HHP+IN AVD + +AT  V+T A+ + +  G LRY+QC VE  TGK+ LTLV NA   K+A   LS L+K LK  DP  +LWHSIW +     GN IFARD   W +  G  Y+ E I  S     + L Y +P +FRQ NL GF ++     + +P  S VCELY GVG++GL+ L   GK++            LR SD NP    C  + + ++P+                                                          +++V++M A+A   L  GQA GADV+IVDPPRKGL+  V+  L    +P                     A   + ++YVSCGFDAL RD   L+ S  GW+L  A G+VLFPGS+H+ET+ +F R
Sbjct:  131 KSRVAEVDVVESARLYFSSSSVRKHIVGDRRRDGSF--FRVVIPSEIRGWRSQAKLAVSPASTWNRSSGCKIGLYRRGSHEVVPIPDCAAHHPAINRAVDAVMRATTKVRTPAYQEITGEGLLRYVQCQVELTTGKVCLTLVMNAEKFKDAQPHLSYLVKELKRRDP--KLWHSIWCHCNDSGGNAIFARDVSRWHQTDGPPYVRENIPGSDPNEKEGLLYFSPLVFRQANLMGFHEIAREVCEAIPGGSKVCELYAGVGLLGLSALLHHGKLAGANGDGRLGLGFLRCSDENPSNVKCFERAVASMPKHITGRTPRSFQKKGNXXXXXXXXXXXXXXXXXXEISLGDLMASIESXXXXXDRYESNPKDRVTYMQASASSALHRGQALGADVIIVDPPRKGLDDGVLDQLCRPVNPDQMYAERPGLISGLPRHAVNYANDARTLIYVSCGFDALARDTDRLVGSGAGWKLESATGYVLFPGSNHVETVVVFRR 619          
The following BLAST results are available for this feature:
BLAST of NO02G05140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30108.15.200e-22774.37hypothetical protein Naga_100310g5 [Nannochloropsi... [more]
XP_005855555.11.500e-22674.17hypothetical protein NGA_0593800 [Nannochloropsis ... [more]
CBJ30020.15.900e-11449.63conserved unknown protein [Ectocarpus siliculosus][more]
XP_005828415.16.200e-9545.14hypothetical protein GUITHDRAFT_48183, partial [Gu... [more]
XP_002181505.13.900e-8940.25predicted protein [Phaeodactylum tricornutum CCAP ... [more]
GAX21136.11.500e-8538.70methyltransferase-like protein 6 [Fistulifera sola... [more]
GAX12257.12.000e-8539.51methyltransferase-like protein 6 [Fistulifera sola... [more]
XP_002289574.11.600e-8235.46predicted protein [Thalassiosira pseudonana CCMP13... [more]
OEU17615.13.300e-8038.21hypothetical protein FRACYDRAFT_225346 [Fragilario... [more]
EJK49064.11.100e-7536.31hypothetical protein THAOC_32095 [Thalassiosira oc... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL018nonsL018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR003ngnoR003Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007255NSK007255Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G05140.1NO02G05140.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|575341gene_1106Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100310g5gene543Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G05140.1NO02G05140.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G05140 ID=NO02G05140|Name=NO02G05140|organism=Nannochloropsis oceanica|type=gene|length=4131bp
CCCCTGGTAATGAAGATCTGCTCCGTCTCCACCGTGTTGGCCGTGTGTCC
GTCGTCGCCGATCCCCCTCTTCACAAACCTCCTTCCCTGCCTCCGACAAC
TCCTCCGCGACACCAACACCAACGTCCCTCCCTCCCTCCCGGCCTCTTTT
CCCCTTCCTAATGACAAGGACACATTCCGCGCGGCCTGGACAAAGGCACT
CATGACGGGTAACACCCATTCATCCGCCGAAGCATCAATCAACGGTTGAA
GCAGAGGACGGTTCCAAAAGAAACGGTCATCGGCCCGTTGCCACAATGGA
AGAGAACGACGGCGGAGAGATTTGGGCTTCGAGTGTTTCGGGAGGAGAGA
AGGGAAGGAGGGTTGAGAGGGGAGGAGGGAAGGAGGGTGGAAGAGGTCGG
CGCGGCGTTGGGCGGTAAGGGTGACGTCACACGTGTGAGAGAAGTAGAGG
TCATGTGTGCGAAACGCCAGACGGAGGAGCTCCAGCTGCCCTGCATCCTC
ATCTTCCTCGTCCTCGTATTCATCCTTTTCCTTGTCTGGTTTGACGTGTG
CCTTGCCTTCCTCCCCTCCCTCCTTTCTCTTCTCCTCCAGCTCCTCCTCT
TCCGGATCCCCCAACATAGCCGCCACCGTCGGAAAGTTCCTCTTCTTCTT
TCTTGCCTTCCTCTCTTCTACATCCTCTCCCTTCTGTATCCTCGCACTCC
CACTCCCATCACTGCGACTATCTCTGCTGTTGTTCCTGCTGCTGTTGCTC
CAGGCATTACTCACCCTCACCAACGTCACTTTCGTCACCAGACGAAACTC
CATGGCATGTCCCCTGTATCGCTCCTCCGACTCAGTAATTAGAGCAAGGT
AAGGGCCGGAAGGAAGATTAAAAAAGCCGTACACGCCCTCGATTGCCAAG
GCCGAGGAGGAGGAGGGGGTAGAAAGAAAGAAAGCACAATCGGCCTTGGC
TCGCTTTTGGAGTTGGAGATCTTGTCCGGGTGCAAGAGGAGAACGAGGAA
TAAGCACAACGGTATCATCAAGCCGAGACTCAAGGATGAGCTCGTCTTTC
GTAATGTGCAATTTGCGCCAAGCACCTGCGGTGGCGCTGCTACAGCCGGG
AGAGGAGGCAGAGGAGAAGGAAGGAGAACGCGGAATGAGGGAGGAGGTCT
GATCTAAAAGATCTGGGAGCACAGCAACATTACTGCTGCTGCTTTGGTTG
CCAGAAGGAGAGGGGGGGAAAGGTGGCTTGTGGTAGTGGCCATTGGAGGC
AGCGTGCGAGAGAGGGAGTGTCACGCTCACCAGAAGGAGGACAACGATTG
GGAGGGGGAGGACGAGAGGCCTGAGGCTTGGCGGGATGGAGGGAGATAGC
CTCTGGATCATCTGTCAGCAGATGCCGCAGTCGCGACGAGCCTGAAGGCA
AGCAGCTGATGTGAAGCGGTGATGGGTGCGGAAATGTGACGCAACCGAGG
AAGGGAGGCCAAGGGGTAATGATTTGACGAACGATGTTTTGCGGATTCCC
CCTGTACCACAACAACCCCCCACGCCTGATCGCTGGCGTCGTCCCTGTGC
TAATGCGTCAGGTTGATTCGTGGACATTTAGATGCTTGTGAAGTTTCAAA
GCGGAGGAGTCTCGGACATCAAGTCAACTCGCCGCATCCGCGCCTTGCGG
CCGCCTCGCTCCCCCGTCGCCCTTCCACTATCCCAGGGCCACCACTTTGC
CTGGAGTTGTTTTCCTCCATCTTTCCAAACACACCCACAGCCATCCATAA
GCACAGGCTCTTCAAGAAGAAAGGACGGGCCGCGAGGTGAAATGGCCTTG
TCCAGAAGAAGACCTTGCATCTGCCGCAGCCTCGCCATGCTAATATTGgt
acgtacgcctctgtgtggtggccaggacaatgccctatgccaccccactc
ttccctcttgtcttgtaatatttcccaagcattttttacggccacgagag
cattgtcgtgaggatgcaatctcttgtcaccctccgcgcaccgccacccc
cgccctccctcactcccctcccattatctgcgcccaattcaattcgcagG
CCGCCGCCGCCTCCTCCCTTTGCGCTCGAGCATTTGTCCTTCCGTTTGCC
AACCCCACTTTCCGACGTCCATTCTTCAGCCTTGCTGCAGGTGCTGGTGG
TGGCGGTAGCGGCAGAAGCAGCAACACCAACGGCAAACGGCCCGATCGCA
GCAGCAATAGCAGCGGCGGTGGACCCCAGGGAGGCAGCAACGACAGCGGG
AGCAGCAGCATTAGCAGCAGCAGCAGTGGAACCTCTCGGCTTGAACGTTT
AGTTCGTAAGTCCTCCTCCTCCTCCTCCTCCTCCTTATCCTTCAACAAAC
AACCAGGAAGCAGCAGTACAGGCAGCAGAAGCAGTGACAGCAGCAGCGAG
CCCCGCATGCGCTCCCCCAGATTTTCCACCCCTCCTTATCATTCTTCTCG
GTCACCCTCCTCTTCCTCTTCCTCCTCCTCCTTCTCCTCCTCCCCGCAAT
CGTTCCCCAAAAAAATCGGCCCTATCTCAGAAGAAGTGGGCCAACACCTT
ACCCCTAAGATGTACGCGCCGCGAGAAGCCTTTGACATCGATGCACGACC
CAACAGTCGCAAGGCTCGCAAGGCCGCCTCATCGGCAGCAGCGACGGGTG
CACGAGGAGGAGGGGGGGAAGAGGAAGGGGGTGAGGGAGGGGGAGGTGGA
TGGCGAAGGCCGTCGAGGATTGATCAGCGGAGGGACAGGAAGCAGAAGGC
GGCGGTCGATGAGAAGATGAGGAGGTTGAAGGTGCAAAGGTTTGGAAAGG
AGGGATTATTGTTCAAAGACGGGCAAGCGGGGGGGAGGGAGGGAGGGGGA
AAGGACGATTTGCTGCAGTGTGAGCATTTTGGGGCATGTTCCGGGTGTTT
TTTCAGGAGCGGGTTCACAGAGACTCCGTTAATGGAGGATGCCCGCGTGT
TTTTCCGACGGGTGGCTCGGTACGAGAACTTTAATTTGGGCCTCGCGACC
GGTATACATGACTGGCGGACACAAGCCAAGCTGGCTATTGCCCCTCTCTC
CAAATGGGGGGGTTGTCGCATCGGGCTTTATGAGGAAGGGACACATCGCG
TCTTGCCCATTCCCAACTGCCGAGTCCACCATCCAAGCATCAACCATGCC
GTGGATATCATTACTCAAGCAACCGAACTTGTCAAAACCCGTGCATTTGA
CCAAGATTCCCTTAGTGGCTCCCTGCGCTACATCCAATGCGCCGTGGAAC
GGCGCACGGGGAAAATCCAGCTTACCCTTGTCTGGAACGCCCCTGGGCGG
AAAGAGGCCAGTGCGGAGCTTTCCCGCTTGCTGAAAGCCTTGAAGGCTGC
TGATCCTGCGCAAGAATTATGGCATTCGATTTGGGTCAATTATAGAACCG
GGCCAGGCAATACAATTTTTGCACGGGACCCGAGGTCATGGTCCAAGGTG
CAGGGGCTTGATTATCTAACGGAAAAGATAGGGCCGAGCCAAGTGTTATT
TTATTTGACACCGCAGTTGTTTCGACAGGGAAATTTGGAGGGCTTTGGGA
AGGTAGTGGAGAGAGCACAGGATTTCGTGCCGGAGCAGAGTGTGGTGTGT
GAATTGTATGGAGGGGTGGGGGTGATTGGGTTGAACATGCTCGGGAAGGT
CTCGGCCTTAAGATTTTCGGATATCAATCCTTTTCTGGAAGGGTGTGTAA
TGAAGACGTTGGATGCGCTGCCAGAAAAGAGGCGAGAGAAGGTGTCGTTC
ATGGTGGCGACGGCTTTGGAGGGGTTGGAGGCAGGGCAGGCGGATGGCGC
GGATGTCTTGATTGTGGATCCTCCGCGGAAGGGCTTAGAAGCGGAAGTGA
TGACGCATTTGGTGGACAGGAAGGACCCATTGGCAGGGAGTTTGAAACGA
ATTGTGTATGTCTCGTGTGGGTTTGATGCGTTAAAGCGGGACGCGGTGGC
CTTGATGGACAGTGGGTGGCGCTTGGTGCATGCCGAGGGCTTTGTCTTGT
TTCCGGGGTCGGATCATTTGGAGACGCTGGCCATTTTTGACCGGGGACGA
TAAGTATTGAGGGAGTAAACAGGAAAGTAAATTAAGGTAAATGCTTGACA
TGAAAAAGCATTTTTGCTGCAAGGTGGGGAG
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protein sequence of NO02G05140.1

>NO02G05140.1-protein ID=NO02G05140.1-protein|Name=NO02G05140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=757bp
MLVKFQSGGVSDIKSTRRIRALRPPRSPVALPLSQGHHFAWSCFPPSFQT
HPQPSISTGSSRRKDGPRGEMALSRRRPCICRSLAMLILAAAASSLCARA
FVLPFANPTFRRPFFSLAAGAGGGGSGRSSNTNGKRPDRSSNSSGGGPQG
GSNDSGSSSISSSSSGTSRLERLVRKSSSSSSSSLSFNKQPGSSSTGSRS
SDSSSEPRMRSPRFSTPPYHSSRSPSSSSSSSSFSSSPQSFPKKIGPISE
EVGQHLTPKMYAPREAFDIDARPNSRKARKAASSAAATGARGGGGEEEGG
EGGGGGWRRPSRIDQRRDRKQKAAVDEKMRRLKVQRFGKEGLLFKDGQAG
GREGGGKDDLLQCEHFGACSGCFFRSGFTETPLMEDARVFFRRVARYENF
NLGLATGIHDWRTQAKLAIAPLSKWGGCRIGLYEEGTHRVLPIPNCRVHH
PSINHAVDIITQATELVKTRAFDQDSLSGSLRYIQCAVERRTGKIQLTLV
WNAPGRKEASAELSRLLKALKAADPAQELWHSIWVNYRTGPGNTIFARDP
RSWSKVQGLDYLTEKIGPSQVLFYLTPQLFRQGNLEGFGKVVERAQDFVP
EQSVVCELYGGVGVIGLNMLGKVSALRFSDINPFLEGCVMKTLDALPEKR
REKVSFMVATALEGLEAGQADGADVLIVDPPRKGLEAEVMTHLVDRKDPL
AGSLKRIVYVSCGFDALKRDAVALMDSGWRLVHAEGFVLFPGSDHLETLA
IFDRGR*
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Synonyms
Publications