Naga_100310g5, gene543 (gene) Nannochloropsis gaditana

Overview
NameNaga_100310g5
Unique Namegene543
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1394725..1397216 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100310g5
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1394725..1397216 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL003ngnoL003Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G05140NO02G05140Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna564rna564-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna564rna564Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna564

>rna564-protein ID=rna564-protein|Name=rna564|organism=Nannochloropsis gaditana|type=polypeptide|length=652bp
MHTIQIETMALPRRRPRKTRLCWRLSFTIMFLMICVFHSVCAYFTPFGTK
GLRHSHTGLSASTNGDGNSRKSGSSDPEAGKGDPPRFKRLARKMSSKSFS
FNQIPGRKRAADSSDSPDRSNTARMRPSPPSSSPSSFHEPRGSGPISEAV
GQHLTPEAAAPPEIFDVDARPNSQKARKVASSQSQGKGHREEGLEEDNGA
GGWQRPSRVQQRREKRQQAAMDEKMRRVKIQRFGKEGLLFKDGLAGGQAG
GGRDDALQCEHFGACSGCFYRSGLVETPVMENARVFFQRVARYDNFSLGL
ATGVHGWRTQAKLAVAPLSKWGGCQLGLYEEGSHRVLPIPNCRVHHPSIN
RAVQVLTEATVTMKTRAFDPASLGGSLRYVQVAVERRTGRIQLTLVWNAP
GKKEAGGELSRLLKALKAADASGELWHSIWVNFRTGPGNTIFAREARSWT
KLFGADFLTEKIGPSQTLFYLTPQLFRQGNLDGFEKLVTRAQEFVPAQSV
VCELYGGGGVIGLNMLGKAAALRFSDINPYLGQCVDKTLQALPAKKREKV
SFIIATALEALEAGHADGATVLIVDPPRKGLESEVLAHLVDRKDPYAGTL
RRIVYVSCGFEALKRDAVALMDSGWRLVHAEGFVLFPGSDHLETLAVFDR
TR
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Synonyms
Publications