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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100310g5.1343.mrna |
| Orig protein id | gnl|cribi|Naga_100310g5.1343 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1394725..1397216 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna564 ID=rna564|Name=rna564|organism=Nannochloropsis gaditana|type=mRNA|length=2814bp
CTAGCATACGTCTAGGTTACTCGACCACACTATCTTATTTTAAGCGACTG
CCAATCATGACCGATGATGTCCACCGCCCGTCTCCAGGAGCCCTCCAATC
CCTGATCTATACGCCGCGTTCGCCTCAGTCAGAACAACCTTCGTTGGAAG
TATTGGACCAACTTCTGCTACCGAACAAGAAAGCATACATACCGGTGAAG
ACGACGCAGGATGCGTGGAAGGTCATCCGTGATATGAATGTGAGGGGTGC
GCCTTTAATCGCCATAGTCGCGGTGCTGAGCCTAGCGGTGGAGATGAGCG
CAAAAAGTAACGTGCAGGGGAAGGACGGCTTTGCCTCGTTACAAACAGCA
GCGGCATGGTTACAGAAAGCTGTAGTCTACTTGAAAACGTCTCGACCCAC
TGCAGTGAACCTTTTTACCGCCATGGACGAAGTCCTGCTTTTGAGTCAGG
CTACCACCAAGAAACATGACGCGGTAGGGGCCTGCGTCCAAAACGCAGCC
CCATTGGTCAGCGCGGTGGTAAGGTTCGCGGAGCAGATGCTCAAGGAAGA
CGTGGAATCAAACCAGGCAATAGGAGACCACGGGGCCGCTGCCATCTTGG
CAAATCTCTTGCCAGGACAAGGAGTGAAAGTCCTCACGCATTGCAACACA
GGGTCCTTGGCAACGGCAGGGTACGGCACGGCCCTAGGCGTCATCCGATC
ACTGCACAAAGAGGGGCGGCTGGCACGTGTCTTTTGCACAGAGACGCGTC
CCTACAACCAAGGAGCTCGTTTGACCGCCTTCGAACTGGTCCAAGACCAA
CTTCCGGGTACTTTAATCACGGATTCGATGGTCTCCTTCCTCATGGCCAC
GCAGGGCTTGGACGCGATTGTGGTGGGTGCGGATCGGATCGCAGCGAACG
GCGACACGGCCAACAAAATCGGGACGTATCAATTGGCAGTGACAGCGAAA
CATCATGGGGTTGCATTTTATGTGGCAGCGCCGTTCACGTCGTTCGATCT
CTCCTTGGCATCCGGTGATCAGATAGAGATTGAAGAACGGCCCGCGCGGG
AGCTGACGCAGGTGCAGGGGATTCAAGTGGCGCCCCAAGAGATTGCGGTA
TGGAATCCAGGCTTTGACGTGACCCCCGCCTCCTTGATCACCGGGATCAT
CACAGAGAAGGGCGTGATCCACCCTTTCCCCTCTGCTGGGGCTACAGACG
CGAAGCCACGCGTTCCAACACAGGAGACGGGCGAAGACAGGAGGAAAAGT
AACGGGACCGTGGGCCATGGAAGGCGGATGACGTTTGACATCCCGGGCTT
TTTGAACGGCGAGGGGGCGCATCAAATACCATCGTCTTTGCCGGATGCCG
CAGCCCCGACCCCTTCCATGGAGTTGGACAGCGCCAACCTCCCATCCCCC
TCCTCAGGATACAAGGCTTTGAGCGAAGAGAACGTGGCGCTTTTCCTTGA
GAAACACGTGCGAGACGTGTGGGACCTGCTGGGGGCCCGGACCGGGGCCG
AGGTGGAAATCTCCGAGGTCGGAGATGGGAATTTGAATCTAGTGTTCATC
GTCAGAGGTCCGAAAAACACCGTGGTCGTCAAGCAAGCCCTGCCCTACGT
GCGTTGTGTGGGGGAATCGTGGCCCTTGACGCTGGACCGGGCCTTCTACG
AGGCCGCCGCATTGCAGGAGGAGGGCCGTCACACGCCAAGGCTGGTGCCA
GAGGTCTACTATTCTAATAGGGCACTGGCCCTGATTGTCATGCAGTTCGT
GCCTCCCCCCCATATCATCCTTCGGAAAGCCCTGATACGAGGCGACGTCC
TTTCTACCCTGGCAGCGGACTTGAGCGACTTTATGGCACGGAACCTCTTC
TTCACTTCCTCCTTCCACCACTCTGGCCCTTCCAAACGGGAGGCGGTGGC
CTTCTGGTCAGGAAACCATGGTTTGTGCGCCTTGACGGAAGCTGTCGTCT
TCACCGAACCCTACTGCCCGGAGGTGGCGCACAATCGTTGGACCAGCCCG
GCATTGGACGAGACGGTCGCCCAGCTTCGACAAGACCAGGCTTTAAAAGT
GGCTGTGGGGAAATTGAAAGCGAAATTCATGGATTCCACGGAAGCTTTGT
GCCACGGGGACTTGCACACGGGTTCCGTGATGGTCAAGGAGGGATCCACC
GTCGTAATCGACCCCGAATTCGCGTTCTATGGGCCGATGGGCTTCGAGTG
CGGGGCTCTCTTGGCAAATTTCTGGCTGAATTATTTCAGCCAGGCGGGGC
GGGCATCGGACGGGGGAGGACGGCACGAGTATGCTGAGTGGGTCCTTGAC
ACGTCCGTGGCGATATGGCAGGAATTCTGCGCCAAATTTCTGGCTTTGTG
GGCCGACGCGGCGACGCATCAGGGAGAAGGTTTCAAGCGAGTCGCCTACG
CAAAGCCCGAGGAGCTGAGAGCAGCCCAGGAAGCGTTTGTGCAAGACCTC
CTACGGGACACGCTGGGCTTTGCCGGTTGCAAAATGATTCGGAGGATCAT
CGGGATCGCGCACGTGGAGGACTTTGAGTCGATCCCGGATCCTCAAGTGC
GGGCGGCCTGCGAGAAGCGGGCATTGAGCATGGCTCGGACCTTGGTGGTA
CACGGAGGGGAGTACGCGAGCATGGAGGCAGTAGCGGCCTTAGCCCGGAA
AGCCTGAGTCTCGAGGCTGGATGTAGGGGTCCGGGTGAACGCGATTGCAC
GGGGCTTCGGAAGAAGAGGTATGCAAGAAGCCAGACCGGACTTTTCTTGG
CTGGACATGGACGGCCGGTTGTAAGCACAATGATGATGAAAGCTAAATGG
TCCTTACGTGAAGG back to topprotein sequence of rna564 >rna564-protein ID=rna564-protein|Name=rna564|organism=Nannochloropsis gaditana|type=polypeptide|length=652bp
MHTIQIETMALPRRRPRKTRLCWRLSFTIMFLMICVFHSVCAYFTPFGTK
GLRHSHTGLSASTNGDGNSRKSGSSDPEAGKGDPPRFKRLARKMSSKSFS
FNQIPGRKRAADSSDSPDRSNTARMRPSPPSSSPSSFHEPRGSGPISEAV
GQHLTPEAAAPPEIFDVDARPNSQKARKVASSQSQGKGHREEGLEEDNGA
GGWQRPSRVQQRREKRQQAAMDEKMRRVKIQRFGKEGLLFKDGLAGGQAG
GGRDDALQCEHFGACSGCFYRSGLVETPVMENARVFFQRVARYDNFSLGL
ATGVHGWRTQAKLAVAPLSKWGGCQLGLYEEGSHRVLPIPNCRVHHPSIN
RAVQVLTEATVTMKTRAFDPASLGGSLRYVQVAVERRTGRIQLTLVWNAP
GKKEAGGELSRLLKALKAADASGELWHSIWVNFRTGPGNTIFAREARSWT
KLFGADFLTEKIGPSQTLFYLTPQLFRQGNLDGFEKLVTRAQEFVPAQSV
VCELYGGGGVIGLNMLGKAAALRFSDINPYLGQCVDKTLQALPAKKREKV
SFIIATALEALEAGHADGATVLIVDPPRKGLESEVLAHLVDRKDPYAGTL
RRIVYVSCGFEALKRDAVALMDSGWRLVHAEGFVLFPGSDHLETLAVFDR
TR back to topmRNA from alignment at CM002455.1:1394725..1397216- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna564 ID=rna564|Name=rna564|organism=Nannochloropsis gaditana|type=mRNA|length=2492bp|location=Sequence derived from alignment at CM002455.1:1394725..1397216- (Nannochloropsis gaditana)
CTGATAAATTTACCCCAGCGATCTCAACGCACTCGTTCCAGCAGCCCCTT
GCTTCTCTGACGAAGCATACGATCCACGTCAAGTGCCTGAAATATGTGAT
GGAGAGTTTGAATGAGTGCGAGCTGGCAGCTTTACATTGAATACCTTTCT
GTCCGGTTCAACTTGGCTTTGACGGGTCTATGTCGTTTCCATGATTTTGC
TACGGTATCCTTTGATGTCGATGTTTCACGCCCCTCCCTCTCATATCTTT
CATGCACACAATACAAATAGAAACCATGGCACTTCCACGGAGAAGACCGC
GCAAGACACGCCTGTGCTGGCGGCTTTCCTTCACTATCATGTTTCTGATG
GTGAGGATACCCCCTGTTCCATTGACCCCCCCCTTTGTGACCTTACAGGC
TCCTTGACATTGAGCAATGACGTCTTCATGTCAAACAAATGATCTCAATC
CACACTTTGTGCCATCGGTCCAGGCGTTTCGCTTCATTTATCTGTGTTTT
TATATCTTCTTTTCCCTTCCCATCCACCCGGACGGGTCTCCCTCACCAGA
TTTGTGTGTTCCATTCTGTCTGCGCCTATTTCACCCCCTTTGGTACCAAG
GGCCTTCGACATAGCCACACTGGTCTTTCTGCAAGTACCAACGGTGACGG
TAACAGCAGAAAGAGCGGCTCTTCGGACCCTGAGGCTGGCAAAGGGGACC
CTCCGCGCTTTAAACGCCTTGCAAGAAAGATGTCATCGAAATCCTTCTCT
TTCAATCAGATACCGGGCAGGAAGAGGGCCGCAGACAGCAGCGATAGCCC
AGACAGAAGTAACACCGCTCGAATGCGTCCTTCTCCTCCTTCCTCCTCTC
CTTCCTCTTTCCATGAGCCCAGGGGCAGCGGGCCCATTTCGGAGGCGGTG
GGGCAGCACTTGACCCCTGAGGCGGCGGCACCCCCGGAAATTTTCGACGT
GGACGCCCGTCCGAACAGCCAGAAAGCCAGAAAGGTGGCGTCGTCACAGT
CTCAAGGGAAGGGACACCGAGAAGAGGGATTGGAGGAGGACAATGGGGCG
GGGGGGTGGCAACGGCCTTCCCGAGTCCAACAGCGAAGGGAGAAGAGGCA
GCAAGCGGCTATGGACGAAAAAATGCGCCGGGTGAAGATCCAGCGTTTCG
GGAAGGAAGGTCTGCTGTTTAAGGACGGCCTCGCAGGGGGACAGGCGGGG
GGAGGACGGGACGATGCCTTGCAATGCGAGCATTTTGGGGCCTGCTCTGG
GTGTTTCTATCGAAGCGGCTTGGTCGAAACCCCCGTGATGGAAAACGCCC
GCGTTTTTTTCCAACGGGTCGCCCGGTACGACAATTTTAGCCTGGGTCTG
GCCACGGGCGTGCACGGGTGGCGGACGCAGGCAAAATTGGCCGTGGCCCC
GCTTTCTAAGTGGGGGGGATGCCAGCTTGGTTTGTACGAAGAAGGGAGCC
ACCGGGTGTTGCCGATCCCAAACTGCCGCGTCCACCACCCCAGCATCAAT
CGGGCCGTCCAAGTGTTGACGGAGGCGACCGTCACGATGAAGACGCGGGC
CTTTGACCCGGCTTCTCTGGGGGGTTCCCTCCGCTACGTCCAAGTCGCCG
TAGAGCGTCGGACCGGGCGCATTCAACTAACCTTAGTCTGGAACGCCCCG
GGGAAGAAGGAGGCAGGCGGGGAACTCTCCCGCTTGTTGAAGGCCTTGAA
AGCCGCCGATGCCTCGGGTGAATTGTGGCACTCGATTTGGGTGAACTTTA
GGACGGGACCGGGCAACACCATCTTCGCCCGGGAGGCAAGGTCGTGGACG
AAGCTCTTTGGCGCCGACTTTCTCACCGAAAAAATCGGTCCGTCCCAGAC
TTTGTTCTACCTGACCCCGCAGTTGTTCCGGCAGGGAAATTTGGACGGCT
TTGAAAAGCTGGTGACGCGTGCGCAGGAATTCGTGCCGGCACAAAGCGTC
GTCTGTGAGTTGTACGGCGGGGGGGGAGTGATCGGTCTGAATATGCTGGG
AAAAGCGGCCGCCTTGCGTTTTTCCGACATCAATCCCTACCTGGGACAGT
GCGTAGACAAGACATTGCAGGCATTGCCGGCGAAAAAGCGGGAGAAAGTG
TCGTTCATCATCGCCACGGCCCTGGAGGCCTTAGAAGCCGGACACGCCGA
CGGGGCGACCGTGCTAATCGTGGACCCCCCGCGGAAGGGCTTGGAGTCAG
AGGTGTTGGCTCATTTGGTGGACAGGAAAGACCCGTACGCGGGGACGCTG
CGGAGAATCGTGTATGTTTCCTGCGGATTCGAGGCGTTGAAGCGGGACGC
GGTGGCCTTGATGGACAGTGGCTGGCGCCTGGTGCATGCGGAGGGCTTCG
TCCTTTTCCCGGGGTCGGACCATTTGGAAACGTTGGCGGTGTTCGATCGG
ACGCGGTGAGCACGCAGTAGACCTTAAAAAGTAACATGTACATGCTTTGA
ACGAGTTTGAGTCGCATTCGTGGAGTATAACCTTCTTTTTGC back to topCoding sequence (CDS) from alignment at CM002455.1:1394725..1397216- >rna564 ID=rna564|Name=rna564|organism=Nannochloropsis gaditana|type=CDS|length=3918bp|location=Sequence derived from alignment at CM002455.1:1394725..1397216- (Nannochloropsis gaditana)
ATTTGTGTGTTCCATTCTGTCTGCGCCTATTTCACCCCCTTTGGTACCAA
GGGCCTTCGACATAGCCACACTGGTCTTTCTGCAAGTACCAACGGTGACG
GTAACAGCAGAAAGAGCGGCTCTTCGGACCCTGAGGCTGGCAAAGGGGAC
CCTCCGCGCTTTAAACGCCTTGCAAGAAAGATGTCATCGAAATCCTTCTC
TTTCAATCAGATACCGGGCAGGAAGAGGGCCGCAGACAGCAGCGATAGCC
CAGACAGAAGTAACACCGCTCGAATGCGTCCTTCTCCTCCTTCCTCCTCT
CCTTCCTCTTTCCATGAGCCCAGGGGCAGCGGGCCCATTTCGGAGGCGGT
GGGGCAGCACTTGACCCCTGAGGCGGCGGCACCCCCGGAAATTTTCGACG
TGGACGCCCGTCCGAACAGCCAGAAAGCCAGAAAGGTGGCGTCGTCACAG
TCTCAAGGGAAGGGACACCGAGAAGAGGGATTGGAGGAGGACAATGGGGC
GGGGGGGTGGCAACGGCCTTCCCGAGTCCAACAGCGAAGGGAGAAGAGGC
AGCAAGCGGCTATGGACGAAAAAATGCGCCGGGTGAAGATCCAGCGTTTC
GGGAAGGAAGGTCTGCTGTTTAAGGACGGCCTCGCAGGGGGACAGGCGGG
GGGAGGACGGGACGATGCCTTGCAATGCGAGCATTTTGGGGCCTGCTCTG
GGTGTTTCTATCGAAGCGGCTTGGTCGAAACCCCCGTGATGGAAAACGCC
CGCGTTTTTTTCCAACGGGTCGCCCGGTACGACAATTTTAGCCTGGGTCT
GGCCACGGGCGTGCACGGGTGGCGGACGCAGGCAAAATTGGCCGTGGCCC
CGCTTTCTAAGTGGGGGGGATGCCAGCTTGGTTTGTACGAAGAAGGGAGC
CACCGGGTGTTGCCGATCCCAAACTGCCGCGTCCACCACCCCAGCATCAA
TCGGGCCGTCCAAGTGTTGACGGAGGCGACCGTCACGATGAAGACGCGGG
CCTTTGACCCGGCTTCTCTGGGGGGTTCCCTCCGCTACGTCCAAGTCGCC
GTAGAGCGTCGGACCGGGCGCATTCAACTAACCTTAGTCTGGAACGCCCC
GGGGAAGAAGGAGGCAGGCGGGGAACTCTCCCGCTTGTTGAAGGCCTTGA
AAGCCGCCGATGCCTCGGGTGAATTGTGGCACTCGATTTGGGTGAACTTT
AGGACGGGACCGGGCAACACCATCTTCGCCCGGGAGGCAAGGTCGTGGAC
GAAGCTCTTTGGCGCCGACTTTCTCACCGAAAAAATCGGTCCGTCCCAGA
CTTTGTTCTACCTGACCCCGCAGTTGTTCCGGCAGGGAAATTTGGACGGC
TTTGAAAAGCTGGTGACGCGTGCGCAGGAATTCGTGCCGGCACAAAGCGT
CGTCTGTGAGTTGTACGGCGGGGGGGGAGTGATCGGTCTGAATATGCTGG
GAAAAGCGGCCGCCTTGCGTTTTTCCGACATCAATCCCTACCTGGGACAG
TGCGTAGACAAGACATTGCAGGCATTGCCGGCGAAAAAGCGGGAGAAAGT
GTCGTTCATCATCGCCACGGCCCTGGAGGCCTTAGAAGCCGGACACGCCG
ACGGGGCGACCGTGCTAATCGTGGACCCCCCGCGGAAGGGCTTGGAGTCA
GAGGTGTTGGCTCATTTGGTGGACAGGAAAGACCCGTACGCGGGGACGCT
GCGGAGAATCGTGTATGTTTCCTGCGGATTCGAGGCGTTGAAGCGGGACG
CGGTGGCCTTGATGGACAGTGGCTGGCGCCTGGTGCATGCGGAGGGCTTC
GTCCTTTTCCCGGGGTCGGACCATTTGGAAACGTTGGCGGTGTTCGATCG
GACGCGGTGAATGCACACAATACAAATAGAAACCATGGCACTTCCACGGA
GAAGACCGCGCAAGACACGCCTGTGCTGGCGGCTTTCCTTCACTATCATG
TTTCTGATGATTTGTGTGTTCCATTCTGTCTGCGCCTATTTCACCCCCTT
TGGTACCAAGGGCCTTCGACATAGCCACACTGGTCTTTCTGCAAGTACCA
ACGGTGACGGTAACAGCAGAAAGAGCGGCTCTTCGGACCCTGAGGCTGGC
AAAGGGGACCCTCCGCGCTTTAAACGCCTTGCAAGAAAGATGTCATCGAA
ATCCTTCTCTTTCAATCAGATACCGGGCAGGAAGAGGGCCGCAGACAGCA
GCGATAGCCCAGACAGAAGTAACACCGCTCGAATGCGTCCTTCTCCTCCT
TCCTCCTCTCCTTCCTCTTTCCATGAGCCCAGGGGCAGCGGGCCCATTTC
GGAGGCGGTGGGGCAGCACTTGACCCCTGAGGCGGCGGCACCCCCGGAAA
TTTTCGACGTGGACGCCCGTCCGAACAGCCAGAAAGCCAGAAAGGTGGCG
TCGTCACAGTCTCAAGGGAAGGGACACCGAGAAGAGGGATTGGAGGAGGA
CAATGGGGCGGGGGGGTGGCAACGGCCTTCCCGAGTCCAACAGCGAAGGG
AGAAGAGGCAGCAAGCGGCTATGGACGAAAAAATGCGCCGGGTGAAGATC
CAGCGTTTCGGGAAGGAAGGTCTGCTGTTTAAGGACGGCCTCGCAGGGGG
ACAGGCGGGGGGAGGACGGGACGATGCCTTGCAATGCGAGCATTTTGGGG
CCTGCTCTGGGTGTTTCTATCGAAGCGGCTTGGTCGAAACCCCCGTGATG
GAAAACGCCCGCGTTTTTTTCCAACGGGTCGCCCGGTACGACAATTTTAG
CCTGGGTCTGGCCACGGGCGTGCACGGGTGGCGGACGCAGGCAAAATTGG
CCGTGGCCCCGCTTTCTAAGTGGGGGGGATGCCAGCTTGGTTTGTACGAA
GAAGGGAGCCACCGGGTGTTGCCGATCCCAAACTGCCGCGTCCACCACCC
CAGCATCAATCGGGCCGTCCAAGTGTTGACGGAGGCGACCGTCACGATGA
AGACGCGGGCCTTTGACCCGGCTTCTCTGGGGGGTTCCCTCCGCTACGTC
CAAGTCGCCGTAGAGCGTCGGACCGGGCGCATTCAACTAACCTTAGTCTG
GAACGCCCCGGGGAAGAAGGAGGCAGGCGGGGAACTCTCCCGCTTGTTGA
AGGCCTTGAAAGCCGCCGATGCCTCGGGTGAATTGTGGCACTCGATTTGG
GTGAACTTTAGGACGGGACCGGGCAACACCATCTTCGCCCGGGAGGCAAG
GTCGTGGACGAAGCTCTTTGGCGCCGACTTTCTCACCGAAAAAATCGGTC
CGTCCCAGACTTTGTTCTACCTGACCCCGCAGTTGTTCCGGCAGGGAAAT
TTGGACGGCTTTGAAAAGCTGGTGACGCGTGCGCAGGAATTCGTGCCGGC
ACAAAGCGTCGTCTGTGAGTTGTACGGCGGGGGGGGAGTGATCGGTCTGA
ATATGCTGGGAAAAGCGGCCGCCTTGCGTTTTTCCGACATCAATCCCTAC
CTGGGACAGTGCGTAGACAAGACATTGCAGGCATTGCCGGCGAAAAAGCG
GGAGAAAGTGTCGTTCATCATCGCCACGGCCCTGGAGGCCTTAGAAGCCG
GACACGCCGACGGGGCGACCGTGCTAATCGTGGACCCCCCGCGGAAGGGC
TTGGAGTCAGAGGTGTTGGCTCATTTGGTGGACAGGAAAGACCCGTACGC
GGGGACGCTGCGGAGAATCGTGTATGTTTCCTGCGGATTCGAGGCGTTGA
AGCGGGACGCGGTGGCCTTGATGGACAGTGGCTGGCGCCTGGTGCATGCG
GAGGGCTTCGTCCTTTTCCCGGGGTCGGACCATTTGGAAACGTTGGCGGT
GTTCGATCGGACGCGGTGAATGCACACAATACAAATAGAAACCATGGCAC
TTCCACGGAGAAGACCGCGCAAGACACGCCTGTGCTGGCGGCTTTCCTTC
ACTATCATGTTTCTGATG back to top
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