EWM30108.1, cds564 (CDS) Nannochloropsis gaditana

Overview
NameEWM30108.1
Unique Namecds564
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1396867..1396965 -
Alignment locationCM002455.1:1394808..1396667 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30108.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100310g5.1343.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1396867..1396965 -
CM002455.1supercontigCM002455.1:1394808..1396667 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0006396RNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0008173RNA methyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR010280U5_MeTrfase_fam
IPR029063SAM-dependent_MTases
Homology
BLAST of EWM30108.1 vs. NCBI_GenBank
Match: gi|585112753|gb|EWM30108.1| (hypothetical protein Naga_100310g5 [Nannochloropsis gaditana])

HSP 1 Score: 1342.02 bits (3472), Expect = 0.000e+0
Identity = 652/652 (100.00%), Postives = 652/652 (100.00%), Query Frame = 0
Query:    1 MHTIQIETMALPRRRPRKTRLCWRLSFTIMFLMICVFHSVCAYFTPFGTKGLRHSHTGLSASTNGDGNSRKSGSSDPEAGKGDPPRFKRLARKMSSKSFSFNQIPGRKRAADSSDSPDRSNTARMRPSPPSSSPSSFHEPRGSGPISEAVGQHLTPEAAAPPEIFDVDARPNSQKARKVASSQSQGKGHREEGLEEDNGAGGWQRPSRVQQRREKRQQAAMDEKMRRVKIQRFGKEGLLFKDGLAGGQAGGGRDDALQCEHFGACSGCFYRSGLVETPVMENARVFFQRVARYDNFSLGLATGVHGWRTQAKLAVAPLSKWGGCQLGLYEEGSHRVLPIPNCRVHHPSINRAVQVLTEATVTMKTRAFDPASLGGSLRYVQVAVERRTGRIQLTLVWNAPGKKEAGGELSRLLKALKAADASGELWHSIWVNFRTGPGNTIFAREARSWTKLFGADFLTEKIGPSQTLFYLTPQLFRQGNLDGFEKLVTRAQEFVPAQSVVCELYGGGGVIGLNMLGKAAALRFSDINPYLGQCVDKTLQALPAKKREKVSFIIATALEALEAGHADGATVLIVDPPRKGLESEVLAHLVDRKDPYAGTLRRIVYVSCGFEALKRDAVALMDSGWRLVHAEGFVLFPGSDHLETLAVFDRTR 652
            MHTIQIETMALPRRRPRKTRLCWRLSFTIMFLMICVFHSVCAYFTPFGTKGLRHSHTGLSASTNGDGNSRKSGSSDPEAGKGDPPRFKRLARKMSSKSFSFNQIPGRKRAADSSDSPDRSNTARMRPSPPSSSPSSFHEPRGSGPISEAVGQHLTPEAAAPPEIFDVDARPNSQKARKVASSQSQGKGHREEGLEEDNGAGGWQRPSRVQQRREKRQQAAMDEKMRRVKIQRFGKEGLLFKDGLAGGQAGGGRDDALQCEHFGACSGCFYRSGLVETPVMENARVFFQRVARYDNFSLGLATGVHGWRTQAKLAVAPLSKWGGCQLGLYEEGSHRVLPIPNCRVHHPSINRAVQVLTEATVTMKTRAFDPASLGGSLRYVQVAVERRTGRIQLTLVWNAPGKKEAGGELSRLLKALKAADASGELWHSIWVNFRTGPGNTIFAREARSWTKLFGADFLTEKIGPSQTLFYLTPQLFRQGNLDGFEKLVTRAQEFVPAQSVVCELYGGGGVIGLNMLGKAAALRFSDINPYLGQCVDKTLQALPAKKREKVSFIIATALEALEAGHADGATVLIVDPPRKGLESEVLAHLVDRKDPYAGTLRRIVYVSCGFEALKRDAVALMDSGWRLVHAEGFVLFPGSDHLETLAVFDRTR
Sbjct:    1 MHTIQIETMALPRRRPRKTRLCWRLSFTIMFLMICVFHSVCAYFTPFGTKGLRHSHTGLSASTNGDGNSRKSGSSDPEAGKGDPPRFKRLARKMSSKSFSFNQIPGRKRAADSSDSPDRSNTARMRPSPPSSSPSSFHEPRGSGPISEAVGQHLTPEAAAPPEIFDVDARPNSQKARKVASSQSQGKGHREEGLEEDNGAGGWQRPSRVQQRREKRQQAAMDEKMRRVKIQRFGKEGLLFKDGLAGGQAGGGRDDALQCEHFGACSGCFYRSGLVETPVMENARVFFQRVARYDNFSLGLATGVHGWRTQAKLAVAPLSKWGGCQLGLYEEGSHRVLPIPNCRVHHPSINRAVQVLTEATVTMKTRAFDPASLGGSLRYVQVAVERRTGRIQLTLVWNAPGKKEAGGELSRLLKALKAADASGELWHSIWVNFRTGPGNTIFAREARSWTKLFGADFLTEKIGPSQTLFYLTPQLFRQGNLDGFEKLVTRAQEFVPAQSVVCELYGGGGVIGLNMLGKAAALRFSDINPYLGQCVDKTLQALPAKKREKVSFIIATALEALEAGHADGATVLIVDPPRKGLESEVLAHLVDRKDPYAGTLRRIVYVSCGFEALKRDAVALMDSGWRLVHAEGFVLFPGSDHLETLAVFDRTR 652          
BLAST of EWM30108.1 vs. NCBI_GenBank
Match: gi|553192343|ref|XP_005855555.1| (hypothetical protein NGA_0593800 [Nannochloropsis gaditana CCMP526] >gi|422293504|gb|EKU20804.1| hypothetical protein NGA_0593800 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1312.75 bits (3396), Expect = 0.000e+0
Identity = 638/644 (99.07%), Postives = 639/644 (99.22%), Query Frame = 0
Query:    9 MALPRRRPRKTRLCWRLSFTIMFLMICVFHSVCAYFTPFGTKGLRHSHTGLSASTNGDGNSRKSGSSDPEAGKGDPPRFKRLARKMSSKSFSFNQIPGRKRAADSSDSPDRSNTARMRPSPPSSSPSSFHEPRGSGPISEAVGQHLTPEAAAPPEIFDVDARPNSQKARKVASSQSQGKGHREEGLEEDNGAGGWQRPSRVQQRREKRQQAAMDEKMRRVKIQRFGKEGLLFKDGLAGGQAGGGRDDALQCEHFGACSGCFYRSGLVETPVMENARVFFQRVARYDNFSLGLATGVHGWRTQAKLAVAPLSKWGGCQLGLYEEGSHRVLPIPNCRVHHPSINRAVQVLTEATVTMKTRAFDPASLGGSLRYVQVAVERRTGRIQLTLVWNAPGKKEAGGELSRLLKALKAADASGELWHSIWVNFRTGPGNTIFAREARSWTKLFGADFLTEKIGPSQTLFYLTPQLFRQGNLDGFEKLVTRAQEFVPAQSVVCELYGGGGVIGLNMLGKAAALRFSDINPYLGQCVDKTLQALPAKKREKVSFIIATALEALEAGHADGATVLIVDPPRKGLESEVLAHLVDRKDPYAGTLRRIVYVSCGFEALKRDAVALMDSGWRLVHAEGFVLFPGSDHLETLAVFDRTR 652
            MALPRRRPRKTRLCWRLSFTIMFLMICVFHSVCAYFTPFGTKGLRHS T LSASTNGDGNSRKSGSSDPEAGKGDPPRFKRLARKMSSKSFSFNQIPGRKRAADSSDSPDRSNTARMRPSPPSSSPSSFHEPRGSGPISEAVGQHLTPEAAAPPEIFDVDARPNSQKARKVASSQSQGKGHREEGLEE+NGAG WQRPSRVQQRREKRQQAAMDEKMRRVKIQRFGKEGLLFKDGLAGGQAGGGRDDALQCEHFGACSGCFYRSGLVETPVMENARVFFQRVARYDNFSLGLATGVHGWRTQAKLAVAPLSKWGGCQLGLYEEGSHRVLPIPNCRVHHPSINRAVQVLTEATVTMKTRAFDPASLGGSLRYVQVAVERRTGRIQLTLVWNAPGKKEAGGELSRLLKALKAAD SGELWHSIWVNFRTGPGNTIFAREARSWTKLFGADFLTEKIGPSQTLFYLTPQLFRQGNLDGFEKLVTRAQEFVPAQSVVCELYGGGGVIGLNMLGKAAALRFSDINPYLGQCVDKTLQ LPAKKREKVSFIIATALEALEAGHADGATVLIVDPPRKGLESEVLAHLVDRKDPYAGTLRRIVYVSCGFEALKRDAVALMDSGWRLVHAEGFVLFPGSDHLETLAVFDRTR
Sbjct:    1 MALPRRRPRKTRLCWRLSFTIMFLMICVFHSVCAYFTPFGTKGLRHSRTDLSASTNGDGNSRKSGSSDPEAGKGDPPRFKRLARKMSSKSFSFNQIPGRKRAADSSDSPDRSNTARMRPSPPSSSPSSFHEPRGSGPISEAVGQHLTPEAAAPPEIFDVDARPNSQKARKVASSQSQGKGHREEGLEEENGAGVWQRPSRVQQRREKRQQAAMDEKMRRVKIQRFGKEGLLFKDGLAGGQAGGGRDDALQCEHFGACSGCFYRSGLVETPVMENARVFFQRVARYDNFSLGLATGVHGWRTQAKLAVAPLSKWGGCQLGLYEEGSHRVLPIPNCRVHHPSINRAVQVLTEATVTMKTRAFDPASLGGSLRYVQVAVERRTGRIQLTLVWNAPGKKEAGGELSRLLKALKAADTSGELWHSIWVNFRTGPGNTIFAREARSWTKLFGADFLTEKIGPSQTLFYLTPQLFRQGNLDGFEKLVTRAQEFVPAQSVVCELYGGGGVIGLNMLGKAAALRFSDINPYLGQCVDKTLQVLPAKKREKVSFIIATALEALEAGHADGATVLIVDPPRKGLESEVLAHLVDRKDPYAGTLRRIVYVSCGFEALKRDAVALMDSGWRLVHAEGFVLFPGSDHLETLAVFDRTR 644          
BLAST of EWM30108.1 vs. NCBI_GenBank
Match: gi|298707385|emb|CBJ30020.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 403.675 bits (1036), Expect = 1.062e-130
Identity = 201/409 (49.14%), Postives = 269/409 (65.77%), Query Frame = 0
Query:  255 DALQCEHFGACSGCFYRSGLVETPVMENARVFFQRVARYDNFSLGLATGV-------------HGWRTQAKLAVAPLSKWGGCQLGLYEEGSHRVLPIPNCRVHHPSINRAVQVLTEATVTMKTRAFDPASLGGSLRYVQVAVERRTGRIQLTLVWNAPGKKEAGGELSRLLKALKAADASGELWHSIWVNFRTGPGNTIFAREARSWTKLFGADFLTEKIGPSQTLFYLTPQLFRQGNLDGFEKLVTRAQEFVPAQSVVCELYGGGGVIGLNMLGKAAALRFSDINPYLGQCVDKTLQALPAKKREKVSFIIATALEALEAGHADGATVLIVDPPRKGLESEVLAHLVDRKDPYAGTLRRIVYVSCGFEALKRDAVALMDSGWRLVHAEGFVLFPGSDHLETLAVFDR 650
            D L+C HF AC+GC +     ETP+M ++  F   +      + G A                HGWRT AKLA  P+SKW G +LGLY  GSH V+ IP+CRVHHPS+N AV+ L E+T  +    F   +L G LRYVQ+AVER +G++QLTLVWN    ++A  +L  L K L+++    EL+HSIWVNFR G GN IF+R+  SW +  G ++L E +GPS+  F+ +P LFRQGNLD FE +V    ++VP  S VCELY G GV+GLN+  KAA +R SD+N +  +  +++ + LP   R++VSF   +A EA+E G ++G  VLIVDPPRKGL+  V+  L+D  DP    LRR++YVSCGF+ALKRDA+ L+ +GW L H+EGFVLFPGSDH+ET A+FDR
Sbjct:  110 DELKCRHFKACAGCVFDRRFDETPIMVDSSSFMDSLHSTGARARGGAKAASDFEPHVIHPWKPHGWRTLAKLAARPVSKWRGVELGLYSAGSHNVIGIPDCRVHHPSVNLAVKTLQESTKKIGVTGFRQENLDGDLRYVQMAVERTSGQVQLTLVWNEENYRDATPKLQLLAKDLRSSRP--ELFHSIWVNFRVGVGNAIFSRDPHSWHRCSGPEYLKEVVGPSKIPFFFSPPLFRQGNLDHFESIVQAVVDWVPEGSGVCELYAGVGVLGLNVAAKAAFVRCSDVNSFNPRSFERSRKTLPPNVRKRVSFEAMSADEAMEDGESEGCEVLIVDPPRKGLDKGVMDALMDPDDPNTEALRRVIYVSCGFDALKRDAMNLIGAGWVLRHSEGFVLFPGSDHIETFAIFDR 516          
BLAST of EWM30108.1 vs. NCBI_GenBank
Match: gi|551651268|ref|XP_005828415.1| (hypothetical protein GUITHDRAFT_48183, partial [Guillardia theta CCMP2712] >gi|428172527|gb|EKX41435.1| hypothetical protein GUITHDRAFT_48183, partial [Guillardia theta CCMP2712])

HSP 1 Score: 348.591 bits (893), Expect = 4.835e-111
Identity = 177/398 (44.47%), Postives = 247/398 (62.06%), Query Frame = 0
Query:  257 LQCEHFGACSGCFYRSGLVETPVMENARVFFQRVARYDNFSLGLATG-VHGWRTQAKLAVAPLSKWGGCQLGLYEEGSHRVLPIPNCRVHHPSINRAVQVLTEATVTMKTRAFDPASLGGSLRYVQVAVERRTGRIQLTLVWNAPGKKEAGGELSRLLKALKAADASGELWHSIWVNFRTGPGNTIFAREARSWTKLFGADFLTEKIGPSQTL-FYLTPQLFRQGNLDGFEKLVTRAQEFVPAQSVVCELYGGGGVIGLN-MLGKAAALRFSDINPYLGQCVDKTLQALPAKKREKVSFIIATALEALEAGHADGATVLIVDPPRKGLESEVLAHLVDRKDPYAGTLRRIVYVSCGFEALKRD-AVALMDSGWRLVHAEGFVLFPGSDHLETLAVFDR 650
            L+C HFGAC GC   + L +TP +  A++F   + +       +  G +H WRT AKLAV+P +   G ++GLY+ G+H VL IP CRVHHPSIN AV +L E  + +  +A+D  S  G LRYVQ+ VER + ++Q+T+VWNA   ++A  +   L+K LK  D    ++HSIW+N+RTG GN IF R+ + W  L G  ++ E+I     L F + P +FRQGNL+ F  ++ + + F+   S VCELY G G++GL+  L     LR SD NP        T Q+LP   + K  +  ++A EA+E G  DGA VLIVDPPRKGL  E+LAH +  K P    L++++Y+SCGF+ALK D  V L  + W+L HAEG VLFPGSDH+E L V ++
Sbjct:    2 LRCVHFGACPGCIVEANLHDTPTINEAKMFLGALTKQAGREFEVNMGQIHRWRTLAKLAVSPTNNEMGFEIGLYKSGTHDVLAIPRCRVHHPSINEAVSILQEEMLAVGIQAYDEKSSEGHLRYVQMMVERHSNKVQMTMVWNAENFRDASPQAQLLVKRLKLYD----IFHSIWINYRTGTGNVIFNRDEKKWQLLIGPKYVAERIEAGLNLSFPIAPSMFRQGNLEQFTAIIQKVETFIEPGSKVCELYAGAGMVGLSAALQNCEWLRCSDENPANLDAFLATKQSLPIDLKRKAYYTTSSAEEAIEDGQVDGADVLIVDPPRKGL--ELLAHWIQSKSP--TELKKVIYISCGFKALKEDLKVMLSGNKWKLTHAEGHVLFPGSDHIECLVVLEK 391          
BLAST of EWM30108.1 vs. NCBI_GenBank
Match: gi|219122341|ref|XP_002181505.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406781|gb|EEC46719.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 329.331 bits (843), Expect = 9.060e-101
Identity = 194/486 (39.92%), Postives = 259/486 (53.29%), Query Frame = 0
Query:  255 DALQCEHFGACSGCFYRSGLVETPVMENARVFFQRVA----RYDNFSLGL----------------ATGVHGWRTQAKLAVAPLSK-WG--GCQLGLYEEGSHRVLPIPNCRVHHPSINRAVQVLTEATVTMKTRAFDPASLGGSLRYVQVAVERRTGRIQLTLVWNAPGKKEAGGELSRLLKALKAADASGELWHSIWVNFRTGPGNTIFAREARSWTKLFGADFLTEKIGP-SQTLFYLTPQLFRQGNLDGFEKLVTRAQEFVPAQSVVCELYGGGGVIGLNMLGKAAA-------LRFSDINPYLGQCVDKTLQALPAK--------------------------------------KREKVSFIIATALEALEAGHADGATVLIVDPPRKGLESEVLAHLV-------------------DRKDPYAGTLRRIVYVSCGFEALKRDAVALMDS--GWRLVHAEGFVLFPGSDHLETLAVFDR 650
            +++ CEHFG+CSGC     +    V+++A+++F   A    R+D  + GL                 + V GWRTQAKLAVAP S  W   GC+ GLY+ G+H VL IP+C VHHP+INRA+  L  AT    T AF   +  G LRYVQ+ VER T ++ LTLVWNA   KE    L+RL+K L+  +   +LWHS+W +   G GN IFAR  R W +L G +++ E I   +Q   Y +P  FRQGNLDGF+ L T     VP  S VCELY G G++GL  L   A        +R SD NP   +C  +++++LP +                                        EK S+++ATA +AL+ G A GA V+IVDPPRKGLE EVL  L                    D K  +   +  ++YVSCGF+AL RD+  L+ S  GW L  A G++LFPGSDH+ETL +F R
Sbjct:  121 ESIGCEHFGSCSGCVRDDQVGSVDVIQSAKLYFSSTAVRKKRHDVLTQGLDWAVEDQDDGFYQVVVPSAVRGWRTQAKLAVAPKSSSWARDGCEFGLYQRGTHDVLAIPSCEVHHPAINRALDALRLATAKTGTAAFAKDTRDGGLRYVQLQVERPTQKVSLTLVWNAELLKETQPALARLVKELQTREP--DLWHSMWCHCNNGIGNNIFARNPRRWHRLSGMEYMREPIAVGNQGWLYFSPLTFRQGNLDGFDVLATDVARAVPGGSKVCELYAGVGLLGLTTLAHLAKEGTPLEWIRCSDENPSNPRCFQRSIESLPLEVTGLDRRTNRKSKEDQGMTLAELADLIEAGESSSRSENDMEKASYMVATAAQALQRGEALGADVIIVDPPRKGLEDEVLESLCQPYKADQPYVESVNLLTIADDKVNWTNDVETLIYVSCGFDALARDSQRLLSSAGGWTLHSATGYLLFPGSDHVETLCIFKR 604          
BLAST of EWM30108.1 vs. NCBI_GenBank
Match: gi|1210520253|dbj|GAX21136.1| (methyltransferase-like protein 6 [Fistulifera solaris])

HSP 1 Score: 321.242 bits (822), Expect = 6.834e-99
Identity = 195/491 (39.71%), Postives = 251/491 (51.12%), Query Frame = 0
Query:  254 DDALQCEHFGACSGCFYRSGLVETPVMENARVFFQ----RVARYDNFSLGLA----------------TGVHGWRTQAKLAVAPLSK-WG--GCQLGLYEEGSHRVLPIPNCRVHHPSINRAVQVLTEATVTMKTRAFDPASLGGSLRYVQVAVERRTGRIQLTLVWNAPGKKEAGGELSRLLKALKAADASGELWHSIWVNFRTGPGNTIFAREARSWTKLFGADFLTEKI-GPSQTLFYLTPQLFRQGNLDGFEKLVTRAQEFVPAQSVVCELYGGGGVIGLNMLGKAAA----------LRFSDINPYLGQCVDKTLQALPA---------------------------------------KKREKVSFIIATALEALEAGHADGATVLIVDPPRKGLESEVLAHLV-------------------DRKDPYAGTLRRIVYVSCGFEALKRDAVALMDS--GWRLVHAEGFVLFPGSDHLETLAVFDR 650
            ++A+ C+HF  CSGC     +    V+++A+ +F     R  R D    GL                 + V  WRTQAKLAVAP S  W   GCQ GL+ +G+H VL IP+C VHHPSINRAV  L EAT  +   A+   +    LRYVQ  VER TG+I LTL+WNA   K+    LSRL+K L+A     ELWHS W +     GN IF+R  R W ++ G +F+ E I    Q   Y +P  FRQGNLDGF+ +       +P  S VCELY G G++GL  L   A           +R SD NP   +C  + + +LP                                         KRE+ S+++A+A +AL+AG A GA VLIVDPPRKGLESEVL  L                    D K  +   +  ++YVSCGF+AL RD   L+ S  GW L  A G+VLFPGSDH+ETLA+F R
Sbjct:   14 EEAIGCKHFQECSGCVVDQNVAAVSVVQSAKFYFSSTSVRRKRVDILDRGLPFATEEKDDGFYKVVVPSKVQAWRTQAKLAVAPKSSTWSKDGCQFGLFRQGTHTVLEIPDCTVHHPSINRAVHALVEATEKLGIAAYQENTRDYGLRYVQFQVERVTGKICLTLIWNAETLKQTQPALSRLIKELEAKQP--ELWHSFWCHCNDSTGNNIFSRNPRRWHRISGPEFIREPIPATDQGWLYFSPLTFRQGNLDGFDIIAEDVARAIPGGSKVCELYAGVGLLGLTALSYHANEENGSAPLPWIRCSDENPSNSRCFYRAVDSLPLHVSGRGVGQMQDDSDEKFLTLAELAAMVESGKTPPISQDSKREEPSYLVASAGQALKAGQALGAQVLIVDPPRKGLESEVLDELCKPFNPNQPYVERSTFLTMFDDKVNWVNDVETLIYVSCGFDALARDCERLLSSPAGWVLQSATGYVLFPGSDHVETLAIFKR 502          
BLAST of EWM30108.1 vs. NCBI_GenBank
Match: gi|1210529111|dbj|GAX12257.1| (methyltransferase-like protein 6 [Fistulifera solaris])

HSP 1 Score: 321.242 bits (822), Expect = 7.443e-99
Identity = 194/491 (39.51%), Postives = 253/491 (51.53%), Query Frame = 0
Query:  254 DDALQCEHFGACSGCFYRSGLVETPVMENARVFFQ----RVARYDNFSLGLA----------------TGVHGWRTQAKLAVAPLSK-WG--GCQLGLYEEGSHRVLPIPNCRVHHPSINRAVQVLTEATVTMKTRAFDPASLGGSLRYVQVAVERRTGRIQLTLVWNAPGKKEAGGELSRLLKALKAADASGELWHSIWVNFRTGPGNTIFAREARSWTKLFGADFLTEKI-GPSQTLFYLTPQLFRQGNLDGFEKLVTRAQEFVPAQSVVCELYGGGGVIGLNMLGKAAA----------LRFSDINPYLGQCVDKTLQALP---------------------------------------AKKREKVSFIIATALEALEAGHADGATVLIVDPPRKGLESEVLAHLV-------------------DRKDPYAGTLRRIVYVSCGFEALKRDAVALMDS--GWRLVHAEGFVLFPGSDHLETLAVFDR 650
            ++A+ C+HF  CSGC     +    V+++A+ +F     R  R D  + GL                 + V  WRTQAKLAVAP S  W   GCQ GL+ +G+H VL IP+C VHHPSINRAV  L +AT  +   A+   +    LRYVQ  VER TG+I LTL+WNA   K+    LSRL+K L+A +   +LWHS W +     GN IF+R  R W ++ G +F+ E I    Q   Y +P  FRQGNLDGF+ L       +P  S VCELY G GV+GL  L   A           +R SD NP   +C  + + +LP                                         KRE+ S+++A+A +AL+AG A GA VLIVDPPRKGLE+EVL  L                    D K  +   +  ++YVSCGF+AL RD   L+ S  GW L  A G+VLFPGSDH+ETLA+F R
Sbjct:   14 EEAIGCKHFQDCSGCVVDQNVAAVGVVQSAKFYFSSTSVRRKRVDVLNRGLPFATEEKDDGFYKVVVPSKVQAWRTQAKLAVAPKSSTWSKDGCQFGLFRQGTHTVLEIPDCAVHHPSINRAVHALVDATEKLGIAAYQETTREYGLRYVQFQVERVTGKICLTLIWNAETLKQTQPALSRLIKELEAKEP--DLWHSFWCHCNDSTGNNIFSRNPRRWHRIAGPEFIREPIPATDQGWLYFSPLTFRQGNLDGFDILAEDVARAIPGGSKVCELYAGVGVLGLTALSYHANEENGSSPLPWIRCSDENPSNSRCFYRAVDSLPLNVSGRGVGQMQGDSDEKFLTLAELASMVESGKTPPTSQGSKREEPSYLVASAGQALKAGQALGAQVLIVDPPRKGLEAEVLDELCKPFNSNQPYVERSTFLTMFDDKVNWVNDVETLIYVSCGFDALARDCECLLSSPAGWVLQSATGYVLFPGSDHVETLAIFKR 502          
BLAST of EWM30108.1 vs. NCBI_GenBank
Match: gi|1072232884|gb|OEU17615.1| (hypothetical protein FRACYDRAFT_225346 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 296.59 bits (758), Expect = 2.615e-88
Identity = 186/495 (37.58%), Postives = 248/495 (50.10%), Query Frame = 0
Query:  257 LQCEHFGACSGCFYRSGLVETPVMENARVFFQRVARYDN--------------------FSLGLATGVHGWRTQAKLAVAPLS--KWG--GCQLGLYEEGSHRVLPIPNCRVHHPSINRAVQVLTEATVTMKTRAFDPASLGGSLRYVQVAVERRTGRIQLTLVWNAPGKKEAGGELSRLLKALKAADASGELWHSIWVNFRTGPGNTIFAREARSWTKLFGADFLTEKIGPSQTL--FYLTPQLFRQGNLDGFEKLVTRAQEFVPAQSVVCELYGGGGVIGLNML---------------GKAAAL---RFSDINPYLGQCVDKTLQALPAKKRE------------------------------------KVSFIIATALEALEAGHADGATVLIVDPPRKGLESEVLAHLVDRKDP-------------------YAGTLRRIVYVSCGFEALKRDAVALMDS--GWRLVHAEGFVLFPGSDHLETLAVFDR 650
            + CEHF +C GC   + + ET ++ +A  FF   +   N                    + + + T    WRTQAKL  A  S  +W   GC  GLY+ G+H V+ IPNC+VHHPSINRA+  L +AT    T A+     GG LRYVQ+ VER TG+I LT+VWN    KE    LSRL K L   +   +LWHS+W +   G GN IF R  R+W +L G +F+ E I P   L   Y +P  FRQGN+DGF+ +       V   S VCELY G G++GL+ L               G +  L   R SD NP   +C   +L++LP K  E                                    K S+++A+A EAL+AG A GA +LIVDPPRKGLE  VL  L    +P                   +   ++ ++YVSCGF+AL RD   L+ S  GW+L  A G++LFPGS+H+ETL +F R
Sbjct:  113 IVCEHFDSCPGCVTNTNVGETDIVRSAARFFSSTSIRKNRLDVERSGEDWVVEAEEDGFYEVVVPTETSEWRTQAKLVAASKSGGQWTKEGCIFGLYQRGTHNVISIPNCKVHHPSINRAILALEKATAKTGTHAYSDEWTGG-LRYVQLQVERTTGKICLTVVWNESELKETHPYLSRLTKELSKIEP--DLWHSMWCHCNDGTGNNIFTRSPRNWHRLSGPEFVREPI-PVGDLGWLYFSPLAFRQGNIDGFDIIANDVARAVAPGSKVCELYAGVGMLGLSALIFHHNNHEYYRDRVEGYSEPLTWIRCSDENPANPRCFSASLRSLPQKITEYPRKEEEQKTVTLGDLMKTMEAGGDYEGEAADRTGPKASYMVASAAEALKAGQALGADILIVDPPRKGLEDYVLDELCKPFNPKQPCVESSDMLTVPDHLVNWVNDVQTLIYVSCGFDALARDCEKLLSSGGGWKLESATGYILFPGSNHVETLCIFRR 603          
BLAST of EWM30108.1 vs. NCBI_GenBank
Match: gi|1072222270|gb|OEU07037.1| (hypothetical protein FRACYDRAFT_198696, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 276.944 bits (707), Expect = 1.010e-82
Identity = 173/436 (39.68%), Postives = 227/436 (52.06%), Query Frame = 0
Query:  296 FSLGLATGVHGWRTQAKLAVAPLS--KWG--GCQLGLYEEGSHRVLPIPNCRVHHPSINRAVQVLTEATVTMKTRAFDPASLGGSLRYVQVAVERRTGRIQLTLVWNAPGKKEAGGELSRLLKALKAADASGELWHSIWVNFRTGPGNTIFAREARSWTKLFGADFLTEKIGPSQTL--FYLTPQLFRQGNLDGFEKLVTRAQEFVPAQSVVCELYGGGGVIGLNML---------------GKAAAL---RFSDINPYLGQCVDKTLQALPAKKRE------------------------------------KVSFIIATALEALEAGHADGATVLIVDPPRKGLESEVLAHLVDRKDP-------------------YAGTLRRIVYVSCGFEALKRDAVALMDS--GWRLVHAEGFVLFPGSDHLETLAVFDR 650
            + + + T    WRTQAKL  A  S  +W   GC  GLY+ G+H V+ IPNC+VHHPSINRA+  L +AT    T A+     GG LRYVQ+ VER TG+I LT+VWN    KE    LSRL K L   +   +LWHS+W +   G GN IF R  R+W +L G +F+ E I P   L   Y +P  FRQGN+DGF+ +       V   S VCELY G G++GL+ L               G +  L   R SD NP   +C   +L++LP K  E                                    K S+++A+A EAL+AG A GA +LIVDPPRKGLE  VL  L    +P                   +   ++ ++YVSCGF+AL RD   L+ S  GW+L  A G++LFPGS+H+ETL +F R
Sbjct:   11 YEVVVPTETSEWRTQAKLVAASKSGGQWTKEGCIFGLYQRGTHNVISIPNCKVHHPSINRAILALEKATAKTGTHAYSDEWTGG-LRYVQLQVERTTGKICLTVVWNESELKETHPYLSRLTKELSKIEP--DLWHSMWCHCNDGTGNNIFTRSPRNWHRLSGPEFVREPI-PVGDLGWLYFSPLAFRQGNIDGFDIIANDVARAVAPGSKVCELYAGVGMLGLSALIFHHNNHEYYRDRVEGYSEPLTWIRCSDENPANPRCFSASLRSLPQKITEYPRKEEEQKTVTLGDLMKTMEAGGDYEGEAADRTGPKASYMVASAAEALKAGQALGADILIVDPPRKGLEDYVLDELCKPFNPKQPCVESSDMLTVPDHLVNWVNDVQTLIYVSCGFDALARDCEKLLSSGGGWKLESATGYILFPGSNHVETLCIFRR 442          
BLAST of EWM30108.1 vs. NCBI_GenBank
Match: gi|1084501572|gb|OGN64231.1| (hypothetical protein A3E80_00980 [Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_9])

HSP 1 Score: 244.973 bits (624), Expect = 2.147e-71
Identity = 140/393 (35.62%), Postives = 220/393 (55.98%), Query Frame = 0
Query:  259 CEHFGACSGCFYRSGLVETPVMENARVFFQRVARYDNFSLGLAT-GVHGWRTQAKLAVAPLSKWGGCQLGLYEEGSHRVLPIPNCRVHHPSINRAVQVLTEATVTMKTRAFDPASLGGSLRYVQVAVERRTGRIQLTLVWNAPGKKEAGGELSRLLKALKAADASGELWHSIWVNFRTGPGNTIFAREARSWTKLFGADFLTEKIGPSQTLFYLTPQLFRQGNLDGFEKLVTRAQEFVPAQSVVCELYGGGGVIGLNMLGKAAALRFSDINPYLGQCVDKTLQALPAKKREKVSFIIATALEALEAGHADGATVLIVDPPRKGLESEVLAHLVDRKDPYAGTLRRIVYVSCGFEALKRDAVALMDSGWRLVHAEGFVLFPGSDHLETLAVFDR 650
            C HF +CSGC   + L   P+++ A  FF++    +N S  L T G    R +AKLAV   SK     +GL+++G+H V+ IP+C VH PSIN+A   L +  +      +   S   SLRYVQ+ V+R+T RIQLTLV N         E  R  K+L + D     WHSIW+NF     N IF     +W   +G  FL + +  ++  F+  P  F Q +L+ FE+++   Q ++P ++ + ELY G G IGL +  K   L   + NP+     + +L+ L    ++ +S+ +   L+A +A  +D + +L VDPPRKGL  ++L  L    +      +R++YVSC FE+ ++D  AL+ SGW+L  A+G++LFPG++ +ET+A+ ++
Sbjct:    7 CPHFSSCSGCELSANLYNPPILKGAVAFFEK----NNISFRLITDGFESTRLKAKLAVRKPSK-----IGLFKKGTHEVIDIPDCLVHRPSINQAAAFLRQKIIEESVPLYAEGSHSFSLRYVQLFVDRKTNRIQLTLVLNGSA---TTPEFDRFCKSLLSQD----FWHSIWINFNPTSQNQIF---GLAWNLFWGEPFLWQTLKNTEIAFH--PASFSQAHLNLFERMLETIQNWIPEKTHLLELYAGVGAIGLPLAHKCERLVLVENNPFSKISFEASLKKLSPSLQKSISYHV---LDASKADLSDSSAIL-VDPPRKGLHPDLLNALSRETN------KRLIYVSCSFESFEQDCKALLHSGWKLKEAKGYLLFPGTNSIETVALLEK 368          
The following BLAST results are available for this feature:
BLAST of EWM30108.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112753|gb|EWM30108.1|0.000e+0100.00hypothetical protein Naga_100310g5 [Nannochloropsi... [more]
gi|553192343|ref|XP_005855555.1|0.000e+099.07hypothetical protein NGA_0593800 [Nannochloropsis ... [more]
gi|298707385|emb|CBJ30020.1|1.062e-13049.14conserved unknown protein [Ectocarpus siliculosus][more]
gi|551651268|ref|XP_005828415.1|4.835e-11144.47hypothetical protein GUITHDRAFT_48183, partial [Gu... [more]
gi|219122341|ref|XP_002181505.1|9.060e-10139.92predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1210520253|dbj|GAX21136.1|6.834e-9939.71methyltransferase-like protein 6 [Fistulifera sola... [more]
gi|1210529111|dbj|GAX12257.1|7.443e-9939.51methyltransferase-like protein 6 [Fistulifera sola... [more]
gi|1072232884|gb|OEU17615.1|2.615e-8837.58hypothetical protein FRACYDRAFT_225346 [Fragilario... [more]
gi|1072222270|gb|OEU07037.1|1.010e-8239.68hypothetical protein FRACYDRAFT_198696, partial [F... [more]
gi|1084501572|gb|OGN64231.1|2.147e-7135.62hypothetical protein A3E80_00980 [Chlamydiae bacte... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna564rna564Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications