NO01G05170, NO01G05170 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G05170 vs. NCBI_GenBank
Match: EWM29450.1 (pre-mrna-processing factor 17 [Nannochloropsis gaditana]) HSP 1 Score: 991.5 bits (2562), Expect = 1.200e-285 Identity = 471/598 (78.76%), Postives = 500/598 (83.61%), Query Frame = 0 Query: 45 HLVRRTVNSAPFVNPALKTVLHRPGFIPPTTRELTTNVKAATLLAPIQGPQHPHRRDMDVMGGTKLATGGYKEEAVMEKWNFHEQFHTFHAQGYARDDVGGGVIGNVANYVKREGLKKPAPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPWAPVKGGPVLTELEAGTLTEEQKRHRKELAERKALKHRGYDEEEDHDRRDERKVAHLLPPRHDRDTVASEPSTQFHGKGQKDYQGRSWVEPPAGLREVETDHPCYLPKRCTHRYAGHEKGVQAIEFSPGTGHLLLSGSLDGTCKMWSVYGERQLRRTYSGHGAAVRCINFNADGTRFLSGGFDRFLRLWDTETGQCISTVTNRKVPYAAKFYPPNDKLFVFAASDNRLYTFDWTSGEMVQEYNHHLSAVNTVTFYDNNTKFASTSDDKKMLLWEWDIPVPIKYIAEPGMHSMPAVTPSPDGGFVACQSLDNTIKIFSCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRSLAKYRAHDNGPCIGLTWHPVESSMVASCGWDGLIKLWE 643 +LV R+VNSAPFVNPALKTV++RPGFIPPT+RELTTNVKAATLLAPIQGP+HP RR+MD MGGTKLATGGYKE+AVMEKWNFHEQFHTFHAQGYARDDV GG+IGNV NY+++EGL+ PA GPWAP K PV+T+LEAGTLTEEQKRHR ELAERKA KHRGYDE+ED DRRDERKVAHLLPPRHDRDTVASEP+TQFHGKG+ DYQGRSWVEPP GLR VETDH CYLPKRC HRY GH KGVQAIEF PGTGHLLLS SLDGTCK+WSVY ERQLRRTYSGH AAVRCINF+ DG+RFLSGGFDRFLRLWDTETGQCIST+TNRKVPYAAKFYPPND LF+FAASDNRLYT+DW+SGEMVQEYNHHLSAVNTVTFYDNN++FASTSDDKKMLLWEWDI VPIKYIAEPGMHSMPAVTPSP G FVACQSLDNTIKIF CRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTR+LAKYRAHDNGPCIGL WHPVE+SMVASCGWDGLIKLWE Sbjct: 42 YLVNRSVNSAPFVNPALKTVMNRPGFIPPTSRELTTNVKAATLLAPIQGPEHPFRREMDSMGGTKLATGGYKEDAVMEKWNFHEQFHTFHAQGYARDDVAGGIIGNVHNYMRKEGLRDPA---------------------------GPTAINAGRVTKPSGSTALEPVSRRKRKGVEEDEDLGEEEDGPWAPAKEEPVITQLEAGTLTEEQKRHRAELAERKAAKHRGYDEDEDLDRRDERKVAHLLPPRHDRDTVASEPTTQFHGKGESDYQGRSWVEPPGGLRPVETDHACYLPKRCVHRYTGHGKGVQAIEFFPGTGHLLLSASLDGTCKVWSVYDERQLRRTYSGHTAAVRCINFSPDGSRFLSGGFDRFLRLWDTETGQCISTITNRKVPYAAKFYPPNDNLFIFAASDNRLYTYDWSSGEMVQEYNHHLSAVNTVTFYDNNSRFASTSDDKKMLLWEWDISVPIKYIAEPGMHSMPAVTPSPAGDFVACQSLDNTIKIFGCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRALAKYRAHDNGPCIGLVWHPVEASMVASCGWDGLIKLWE 612
BLAST of NO01G05170 vs. NCBI_GenBank
Match: XP_005855598.1 (pre-mRNA-processing factor 17 [Nannochloropsis gaditana CCMP526] >EKU20761.1 pre-mRNA-processing factor 17 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 980.3 bits (2533), Expect = 2.800e-282 Identity = 467/595 (78.49%), Postives = 496/595 (83.36%), Query Frame = 0 Query: 45 HLVRRTVNSAPFVNPALKTVLHRPGFIPPTTRELTTNVKAATLLAPIQGPQHPHRRDMDVMGGTKLATGGYKEEAVMEKWNFHEQFHTFHAQGYARDDVGGGVIGNVANYVKREGLKKPAPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPWAPVKGGPVLTELEAGTLTEEQKRHRKELAERKALKHRGYDEEEDHDRRDERKVAHLLPPRHDRDTVASEPSTQFHGKGQKDYQGRSWVEPPAGLREVETDHPCYLPKRCTHRYAGHEKGVQAIEFSPGTGHLLLSGSLDGTCKMWSVYGERQLRRTYSGHGAAVRCINFNADGTRFLSGGFDRFLRLWDTETGQCISTVTNRKVPYAAKFYPPNDKLFVFAASDNRLYTFDWTSGEMVQEYNHHLSAVNTVTFYDNNTKFASTSDDKKMLLWEWDIPVPIKYIAEPGMHSMPAVTPSPDGGFVACQSLDNTIKIFSCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRSLAKYRAHDNGPCIGLTWHPVESSMVASCGWDGLIK 640 +LV R+VNSAPFVNPALKTV++RPGFIPPT+RELTTNVKAATLLAPIQGP+HP RR+MD MGGTKLATGGYKE+AVMEKWNFHEQFHTFHAQGYARDDV GG+IGNV NY+++E L+ PA GPWAP K PV+T+LEAGTLTEEQKRHR ELAERKA KHRGYDE+ED DRRDERKVAHLLPPRHDRDTVASEP+TQFHGKG+ DYQGRSWVEPP GLR VETDH CYLPKRC HRY GH KGVQAIEF PGTGHLLLS SLDGTCK+WSVY ERQLRRTYSGH AAVRCINF+ DG+RFLSGGFDRFLRLWDTETGQCIST+TNRKVPYAAKFYPPND LF+FAASDNRLYT+DW+SGEMVQEYNHHLSAVNTVTFYDNN++FASTSDDKKMLLWEWDI VPIKYIAEPGMHSMPAVTPSP G FVACQSLDNTIKIF CRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTR+LAKYRAHDNGPCIGL WHPVE+SMVASCGWDGLIK Sbjct: 42 YLVNRSVNSAPFVNPALKTVMNRPGFIPPTSRELTTNVKAATLLAPIQGPEHPFRREMDSMGGTKLATGGYKEDAVMEKWNFHEQFHTFHAQGYARDDVAGGIIGNVHNYMRKECLRDPA---------------------------GPTAINAGRVTKPSGSTALEPVSRRKRKGVEEDEDLGEEEDGPWAPAKEEPVITQLEAGTLTEEQKRHRAELAERKAAKHRGYDEDEDLDRRDERKVAHLLPPRHDRDTVASEPTTQFHGKGESDYQGRSWVEPPGGLRPVETDHACYLPKRCVHRYTGHGKGVQAIEFFPGTGHLLLSASLDGTCKVWSVYDERQLRRTYSGHTAAVRCINFSPDGSRFLSGGFDRFLRLWDTETGQCISTITNRKVPYAAKFYPPNDNLFIFAASDNRLYTYDWSSGEMVQEYNHHLSAVNTVTFYDNNSRFASTSDDKKMLLWEWDISVPIKYIAEPGMHSMPAVTPSPAGDFVACQSLDNTIKIFGCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRALAKYRAHDNGPCIGLVWHPVEASMVASCGWDGLIK 609
BLAST of NO01G05170 vs. NCBI_GenBank
Match: CBJ32980.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 585.1 bits (1507), Expect = 2.600e-163 Identity = 311/568 (54.75%), Postives = 385/568 (67.78%), Query Frame = 0 Query: 81 NVKAATLLAPIQGPQHPHRRDMDV-MGGTKLATGGYKEEAVMEKWNFHEQFHTFHAQGYARDDVGGGVIGNVANYVKREGLKKPAPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPWAPVKGGPVLTELEAGTLTEEQKRHRKELAERKALKHRGYDEEEDHDRRDERKVAHLLPPRHDRDTVASEPSTQFHGKGQKDYQGRSWVEPPAGLREVETD----HPCYLPKRCTHRYAGHEKGVQAIEFSPGTGHLLLSGSLDGTCKMWSVYGERQLRRTYSGHGAAVRCINFNADGTRFLSGGFDRFLRLWDTETGQCISTVTNRKVPYAAKFYPPNDKLFVFAASDNRLYTFDWTSG-EMVQEYNHHLSAVNTVTFYDNNTKFASTSDDKKMLLWEWDIPVPIKYIAEPGMHSMPAVTPSPDGGFVACQSLDNTIKIFSCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRSLAKYRAHDNGPCIGLTWHPVESSMVASCGWDGLIKLWE 643 N KA LAP+QGP HPHRRD+ V GG TGG E+A +E+W+FHEQ+HTFH GYA D G +GN++ + KR+G XXXXXXXXXXXXXXXXXXXXXX G WAP + T+ EAGT+T EQ + R+ +A KHR Y+ EEDHDRRDERK++HLLPPRH+RDT + + FHGK Q DYQGRSW+ PPAG R VE + H C+ PK+C HRY GH KGVQAI F PG GHLLLS S+DG+ K+W V G R RRTY GH AAVR I F+ DG +FLS G+DRF+R WDTETGQCI+T TNRK+PY AK+YP ++ +F+ SDNR+ +D +G E+VQEYNHHL VNTV F D+N +F STSDDKK+L+WE++IPVPIKYIAEP MHSMPA T P GGF QSLDN I ++ RD+F+ + KK FKGH AG+AC+ AFSPN ++LASGDG+GK++ WD+ +T+ K + HD+GPCI + WHP+E S VA+ GWDG+IKLW+ Sbjct: 83 NPKAEHFLAPVQGPAHPHRRDLPVPAGGRATGTGGVIEQASLEEWSFHEQYHTFHQFGYAVDS-RGDTVGNLSEHSKRQG------------------------DTVLSAEVGGLRRNKXXXXXXXXXXXXXXXXXXXXXXERGGDLGDSDNDGVWAP-EVPREKTDFEAGTMTAEQTKFREAWEAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKTARSTFHGKAQHDYQGRSWMAPPAGARSVEDEGEDVHKCFTPKKCIHRYTGHTKGVQAISFFPGYGHLLLSASMDGSVKIWDVNGGRGQRRTYQGHSAAVRDIQFSNDGKQFLSAGYDRFIRQWDTETGQCIATFTNRKMPYCAKYYPVDNNMFLCGCSDNRVVQYDARNGSEIVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYIAEPDMHSMPATTLHPTGGFFVGQSLDNKIVTWTARDKFRQMKKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKLQCHDDGPCIDVAWHPLEPSWVATAGWDGVIKLWD 624
BLAST of NO01G05170 vs. NCBI_GenBank
Match: GAY06536.1 (putative pre-mRNA splicing factor [Pythium insidiosum]) HSP 1 Score: 521.5 bits (1342), Expect = 3.600e-144 Identity = 278/611 (45.50%), Postives = 362/611 (59.25%), Query Frame = 0 Query: 51 VNSAPFVNPA--LKTVLHRPGFIPPT--TRELTTNVKAATLLAPIQGPQHPHRR----DMDVMGGTKLATGGYKEEAVMEKWNFHEQFHTFHAQ--GYARDDVGGGVIGN---VANYVKREGLKKPAPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPWAPVKGGPVLTELEAGTLTEEQKRHRKELAERKALK-----HRGYDEEEDHDRRDERKVAHLLPPRHDRDTVASEPSTQFHGKGQKDYQGRSWVEPPAGLR-EVETDHPCYLPKRCTHRYAGHEKGVQAIEFSPGTGHLLLSGSLDGTCKMWSVYGERQLRRTYSGHGAAVRCINFNADGTRFLSGGFDRFLRLWDTETGQCISTVTNRKVPYAAKFYPPNDKLFVFAASDNRLYTFDWTSGEMVQEYNHHLSAVNTVTFYDNNTKFASTSDDKKMLLWEWDIPVPIKYIAEPGMHSMPAVTPSPDGGFVACQSLDNTIKIFSCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRSLAKYRAHDNGPCIGLTWHPVESSMVASCGWDGLIKLWE 643 VNSAP V T LH+ T +++LT N+ + LAP GP++ + R + ++G K G E M+ ++F Q+HT++ Q G + + G+ + ++ ++PA G WAP K VLT+ EAGTL+EEQ R R+E E K K + +DE+ D DR E+K AHLLP R A E T+F + DYQGR+WVEPP L+ + + +H YLPKRC H++AGH KGVQAIE P GHLLLSGSLD T ++W VY ER+ +R Y GH AVR +NF+ DG +FL+ GFDRF++LWDTETGQ I + TNR+VPY +++P ++ FV S+N + FD SGE+VQEYNHHL AVN+VTF D+N +F STSDDKK+L+WEW IPVPIKYI+EP MHSMPAVT P GGF A QSL+N I +++ RD+FKL KKVFKGH+ AG+ACQ FSPN +YL SGDGEGKL FWD+K+T+ K RAHD GPC+G+ WHP+E S V +CGWDGLIKLW+ Sbjct: 39 VNSAPLVTTVDPYTTALHQQLAAASTSSSQQLTVNLPVDSTLAPHYGPENAYARASASNPALVGSGKEIVTGVVERTDMDGFSFDSQYHTYNQQHSGLSLNKAPMSTDGDSVFTQRTIAKKSKRRPA-----------------------------------------------------QPKTFAEEFGSHDTDGIWAPYKEKGVLTDAEAGTLSEEQARIRQERLEAKKRKAEERSNTEFDEDMDFDRMVEKKTAHLLPARLKPGQKAMEARTEFLDTQEYDYQGRAWVEPPRTLKPDEDAEHAVYLPKRCIHKWAGHTKGVQAIELFPKYGHLLLSGSLDNTVRIWDVYNERKCKRLYEGHSGAVRGLNFSNDGRQFLTCGFDRFIQLWDTETGQAIKSFTNRRVPYCIRYHPEDNTNFVIGDSNNMVVQFDTRSGEIVQEYNHHLQAVNSVTFVDDNRRFVSTSDDKKILIWEWGIPVPIKYISEPSMHSMPAVTLHPSGGFFAGQSLNNQIDVYTARDKFKLCRKKVFKGHSSAGYACQIGFSPNGQYLTSGDGEGKLCFWDWKSTKMYKKLRAHDRGPCMGVAWHPIEPSQVVTCGWDGLIKLWD 596
BLAST of NO01G05170 vs. NCBI_GenBank
Match: XP_024586158.1 (mRNA splicing factor [Plasmopara halstedii] >CEG49789.1 mRNA splicing factor [Plasmopara halstedii]) HSP 1 Score: 500.0 bits (1286), Expect = 1.100e-137 Identity = 271/606 (44.72%), Postives = 344/606 (56.77%), Query Frame = 0 Query: 51 VNSAPFV------NPALKTVLHRPGFIPPTTRELTTNVKAATLLAPIQGPQHPHRRDMDVMGGTKLATG-----GYKEEAVMEKWNFHEQFHTFHAQGYARDDVGGGVIGNVANYVKREGLKKPAPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPWAPVK-GGPVLTELEAGTLTEEQK--RHRKELAERKALKHRGYDEEEDHDRRDERKVAHLLPPRHDRDTVASEPSTQFHGKGQKDYQGRSWVEPPAGLREVETDHPCYLPKRCTHRYAGHEKGVQAIEFSPGTGHLLLSGSLDGTCKMWSVYGERQLRRTYSGHGAAVRCINFNADGTRFLSGGFDRFLRLWDTETGQCISTVTNRKVPYAAKFYPPNDKLFVFAASDNRLYTFDWTSGEMVQEYNHHLSAVNTVTFYDNNTKFASTSDDKKMLLWEWDIPVPIKYIAEPGMHSMPAVTPSPDGGFVACQSLDNTIKIFSCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRSLAKYRAHDNGPCIGLTWHPVESSMVASCGWDGLIKLWE 643 VNSAPFV KT I + +LT N+ T LAP GP + ++ +M ++ +G G E A ME + F Q+HT H Q I + + +G P P G WAP K G LT+ E GT+ E+QK + E+ RK DEE D DR E+K++HLLP R A E + F G + DYQGR+WVEPP L+ + DH +LPK+C H++ GH KGVQAIE P GHLLLSGS+D T ++W VY ER+ +R Y GH AVR INF+ DG +FLS FDRF++LWDTETGQ + + T R+VPY KFYP ++ FV S++ + FD SGE+VQEYNHHL AVN+VTF D+NT+F S+SDDKK+L+WEW IPVPIKYI+EP MHSMPAVT P G F A QSL+N I +++ RD+FKL KKVF+GH AG+ACQ FSPN +Y+ SGDGEGKL FWD+K+T+ L K RAHD GP +G WHP+ESS V +CGWDGLIK W+ Sbjct: 31 VNSAPFVAITDSEEQRNKTAF----MIAASQTQLTVNLPIDTTLAPFVGPHGGNSTNLALMNPLRVGSGKEIVTGVVEHAEMEDYTFEAQYHT-HNQ----------TISQNPSRHRVKGAPPPPPT-------------------LPGEIIPDTIVASGEEDVFTRRNAKRKNQTSLKARALAENVGDENVTGVWAPYKEKGIFLTDAEKGTMNEQQKMLQEEHEVKRRKTEGKTEMDEEMDFDRMVEKKLSHLLPARLKAGQTALEGKSTFLGDNEYDYQGRAWVEPPRTLKPDDGDHQVFLPKKCIHKWMGHTKGVQAIELFPKYGHLLLSGSMDNTVRIWDVYNERKCQRIYEGHSGAVRGINFSTDGKQFLSCSFDRFIQLWDTETGQAVHSFTTRRVPYCVKFYPVDNTQFVVGDSNHMVVQFDTRSGEIVQEYNHHLQAVNSVTFVDDNTRFVSSSDDKKVLVWEWGIPVPIKYISEPSMHSMPAVTLHPSGAFFAGQSLNNQIDVYTARDKFKLNRKKVFRGHQNAGYACQIGFSPNGQYIMSGDGEGKLVFWDWKSTKQLKKLRAHDRGPTMGAIWHPLESSKVVTCGWDGLIKYWD 602
BLAST of NO01G05170 vs. NCBI_GenBank
Match: GAY05947.1 (putative pre-mRNA splicing factor [Pythium insidiosum]) HSP 1 Score: 498.0 bits (1281), Expect = 4.200e-137 Identity = 271/611 (44.35%), Postives = 354/611 (57.94%), Query Frame = 0 Query: 51 VNSAPFVNPA--LKTVLHRPGFIPPT--TRELTTNVKAATLLAPIQGPQHPHRR----DMDVMGGTKLATGGYKEEAVMEKWNFHEQFHTFHAQ--GYARDDVGGGVIGN---VANYVKREGLKKPAPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPWAPVKGGPVLTELEAGTLTEEQKRHRKELAERKALK-----HRGYDEEEDHDRRDERKVAHLLPPRHDRDTVASEPSTQFHGKGQKDYQGRSWVEPPAGLR-EVETDHPCYLPKRCTHRYAGHEKGVQAIEFSPGTGHLLLSGSLDGTCKMWSVYGERQLRRTYSGHGAAVRCINFNADGTRFLSGGFDRFLRLWDTETGQCISTVTNRKVPYAAKFYPPNDKLFVFAASDNRLYTFDWTSGEMVQEYNHHLSAVNTVTFYDNNTKFASTSDDKKMLLWEWDIPVPIKYIAEPGMHSMPAVTPSPDGGFVACQSLDNTIKIFSCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRSLAKYRAHDNGPCIGLTWHPVESSMVASCGWDGLIKLWE 643 VNSAP V T LH+ T +++LT N+ + LAP GP++ + R + ++G K G E M+ ++F Q+HT++ Q G + + G+ + ++ ++PA G WAP K VLT+ EAGTL+EEQ R R+E E K K + +DE+ D DR E+K AHLLP R A E T+F + DYQGR+WVEPP L+ + + +H YLPKRC H++AGH KGVQAIE P GHLLLSGSLD T ++W VY ER+ +R Y GH AVR +NF+ DG +FL+ GFDRF++LWDTETGQ I + TNR+VPY +++P ++ FV S+N + FD SGE+VQEYNHHL AVN+VTF D+N +F STSDDKK+L+WEW IPVPIKYI+EP MHSMPAVT P GGF A QSL+N I +++ RD+FKL KKVFKGH+ AG+ACQ FSPN G KL FWD+K+T+ K RAHD GPC+G+ WHP+E S V +CGWDGLIKLW+ Sbjct: 39 VNSAPLVTTVDPYMTALHQQLAAASTSSSQQLTVNLPVDSTLAPHYGPENAYARASASNPALVGSGKEIVTGVVERTDMDGFSFDSQYHTYNQQHSGLSLNKAPMSTDGDSVFTQRTIAKKSKRRPA-----------------------------------------------------QPKTFAEEFGSHDTDGIWAPYKEKGVLTDAEAGTLSEEQARIRQERLEAKKRKAEERSNTEFDEDMDFDRMVEKKTAHLLPARLKPGQKAMEARTEFLDTQEYDYQGRAWVEPPRTLKPDEDAEHAVYLPKRCIHKWAGHTKGVQAIELFPKYGHLLLSGSLDNTVRIWDVYNERKCKRLYEGHSGAVRGLNFSNDGRQFLTCGFDRFIQLWDTETGQAIKSFTNRRVPYCIRYHPEDNTNFVIGDSNNMVVQFDTRSGEIVQEYNHHLQAVNSVTFVDDNRRFVSTSDDKKILIWEWGIPVPIKYISEPSMHSMPAVTLHPSGGFFAGQSLNNQIDVYTARDKFKLCRKKVFKGHSSAGYACQIGFSPN--------GRRKLCFWDWKSTKMYKKLRAHDRGPCMGVAWHPIEPSQVVTCGWDGLIKLWD 588
BLAST of NO01G05170 vs. NCBI_GenBank
Match: XP_002898868.1 (pre-mRNA-processing factor, putative [Phytophthora infestans T30-4] >EEY62626.1 pre-mRNA-processing factor, putative [Phytophthora infestans T30-4]) HSP 1 Score: 497.7 bits (1280), Expect = 5.500e-137 Identity = 269/607 (44.32%), Postives = 340/607 (56.01%), Query Frame = 0 Query: 51 VNSAPFV------NPALKTVLHRPGFIPPTTRELTTNVKAATLLAPIQGPQHPHRRDMDVM-----GGTKLATGGYKEEAVMEKWNFHEQFHTFHAQGYARDDVGGGVIGNVANYVKREGLKKPAPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPWAPVKG-GPVLTELEAGTLTEEQKRHRKELAE---RKALKHRGYDEEEDHDRRDERKVAHLLPPRHDRDTVASEPSTQFHGKGQKDYQGRSWVEPPAGLREVETDHPCYLPKRCTHRYAGHEKGVQAIEFSPGTGHLLLSGSLDGTCKMWSVYGERQLRRTYSGHGAAVRCINFNADGTRFLSGGFDRFLRLWDTETGQCISTVTNRKVPYAAKFYPPNDKLFVFAASDNRLYTFDWTSGEMVQEYNHHLSAVNTVTFYDNNTKFASTSDDKKMLLWEWDIPVPIKYIAEPGMHSMPAVTPSPDGGFVACQSLDNTIKIFSCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRSLAKYRAHDNGPCIGLTWHPVESSMVASCGWDGLIKLWE 643 VNSAPFV + A KT G + R L N+ + LAP GPQ ++ +M G K G E+A ME ++F Q+HTF+ ++ + R +K P G WAP K T+ E + E+QK R+E E RKA DEE D DR ERK +HLLP R A E + F G + DYQGR+WVEPP L+ + DH +LPKRC H++ GH KGVQAIE P GHLLLSGS+D T ++W VY ER+ +R Y GH AAVR INF+ DG +FLS FDRF++LWDTETGQ + + T R+VPY KFYP ++ FV S+N + FD SGE+VQEYNHHL AVN+VTF D+N +F STSDDKK+L+WEW IPVPIKYI+EPGMH+MPAVT P GGF A QSL+N I +++ RD+FK+ KK F+GH AG+ACQ FSPN +++ SGDG+GKL FWD+K ++ L K AHD GP +G WHP+E S V SCGWDGLIK W+ Sbjct: 46 VNSAPFVAHSDSQDQANKTAFLSAG----SQRRLAVNLPVESTLAPFMGPQSGDSTELALMDPLRAGSGKEVVTGVVEQADMEDYSFEAQYHTFNE--------------TLSRNIPRNRVKGAPP---------------SAPALPGEIIPDNIVAPDEEDVFTRRNAKKRKNQIISKERAAAEDFGDENSDGIWAPYKDKNKHFTDAELDIMNEQQKALREEHQEAKRRKAEAKSEVDEEMDFDRMVERKTSHLLPARLKAGQTALEGKSTFLGDQEYDYQGRAWVEPPRSLKPDDGDHQVFLPKRCVHKWTGHTKGVQAIELFPKFGHLLLSGSMDNTVRIWDVYNERKCQRVYEGHSAAVRGINFSNDGKQFLSCSFDRFIQLWDTETGQAVHSFTTRRVPYCVKFYPLDNTQFVVGDSNNMVVQFDTRSGEIVQEYNHHLKAVNSVTFVDDNKRFVSTSDDKKLLVWEWGIPVPIKYISEPGMHAMPAVTLHPSGGFFAGQSLNNQIDVYTARDKFKMNRKKTFRGHQNAGYACQIGFSPNGQFVMSGDGQGKLAFWDWKTSKMLQKLHAHDRGPTMGAIWHPLEPSKVVSCGWDGLIKYWD 619
BLAST of NO01G05170 vs. NCBI_GenBank
Match: ETP02377.1 (hypothetical protein F441_20540 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 496.9 bits (1278), Expect = 9.500e-137 Identity = 238/414 (57.49%), Postives = 291/414 (70.29%), Query Frame = 0 Query: 233 GPWAPVKG-GPVLTELEAGTLTEEQKRHRKELAERK---ALKHRGYDEEEDHDRRDERKVAHLLPPRHDRDTVASEPSTQFHGKGQKDYQGRSWVEPPAGLREVETDHPCYLPKRCTHRYAGHEKGVQAIEFSPGTGHLLLSGSLDGTCKMWSVYGERQLRRTYSGHGAAVRCINFNADGTRFLSGGFDRFLRLWDTETGQCISTVTNRKVPYAAKFYPPNDKLFVFAASDNRLYTFDWTSGEMVQEYNHHLSAVNTVTFYDNNTKFASTSDDKKMLLWEWDIPVPIKYIAEPGMHSMPAVTPSPDGGFVACQSLDNTIKIFSCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRSLAKYRAHDNGPCIGLTWHPVESSMVASCGWDGLIKLWE 643 G WAP K LT+ E GT+ E+QK R+E E K A K G DEE D DR E+K +HLLP R A E + F G + DYQGR+WVEPP L+ + DH +LPKRC H++ GH KGVQAIE P GHLLLSGS+D T ++W VY ER +R Y GH AVR INF+ DG +FLS FDRF++LWDTETGQ + + T R+VPY KFYP ++ FV S+N + FD SGE+VQEYNHHL AVN+VTF D+N +F STSDDKK+L+WEW IPVPIKYI+EP MHSMPAVT P GGF A QSL+N I +++ RD+FK+ KKVF+GH AG+ACQ FSPN +Y+ SGDGEGKL FWD+K T+ + K RAHD GP +G WHP+E S + SCGWDGLIK W+ Sbjct: 194 GIWAPYKDKSKHLTDAEQGTMNEQQKALREEHQEAKXXXAAKEEG-DEEMDFDRMVEKKTSHLLPSRLKAGQTALEGKSTFLGDQEYDYQGRAWVEPPRSLKPDDGDHQVFLPKRCVHKWTGHTKGVQAIELFPKYGHLLLSGSMDNTVRIWDVYNERTCQRVYEGHSGAVRGINFSRDGKQFLSCSFDRFIQLWDTETGQAVHSFTTRRVPYCVKFYPLDNTQFVVGDSNNMVVQFDTRSGEIVQEYNHHLQAVNSVTFVDDNKRFVSTSDDKKLLVWEWGIPVPIKYISEPSMHSMPAVTLHPSGGFFAGQSLNNQIDVYTARDKFKINRKKVFRGHQNAGYACQIGFSPNGQYVMSGDGEGKLVFWDWKTTKMVKKLRAHDRGPTMGAIWHPLEPSKIVSCGWDGLIKYWD 606
BLAST of NO01G05170 vs. NCBI_GenBank
Match: ETL79573.1 (hypothetical protein L917_19821 [Phytophthora parasitica]) HSP 1 Score: 491.1 bits (1263), Expect = 5.200e-135 Identity = 235/415 (56.63%), Postives = 289/415 (69.64%), Query Frame = 0 Query: 233 GPWAPVKG-GPVLTELEAGTLTEEQKRHRKE----LAERKALKHRGYDEEEDHDRRDERKVAHLLPPRHDRDTVASEPSTQFHGKGQKDYQGRSWVEPPAGLREVETDHPCYLPKRCTHRYAGHEKGVQAIEFSPGTGHLLLSGSLDGTCKMWSVYGERQLRRTYSGHGAAVRCINFNADGTRFLSGGFDRFLRLWDTETGQCISTVTNRKVPYAAKFYPPNDKLFVFAASDNRLYTFDWTSGEMVQEYNHHLSAVNTVTFYDNNTKFASTSDDKKMLLWEWDIPVPIKYIAEPGMHSMPAVTPSPDGGFVACQSLDNTIKIFSCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRSLAKYRAHDNGPCIGLTWHPVESSMVASCGWDGLIKLWE 643 G WAP K LT+ E GT+ E+QK R+E K G DEE D DR E+K +HLLP R A E + F G + DYQGR+WVEPP L+ + DH +LPKRC H++ GH KGVQAIE P GHLLLSGS+D T ++W VY ER+ +R Y GH AVR INF+ DG +FLS FDRF++LWDTETGQ + + T R+VPY KFYP ++ FV S+N + FD SGE+VQEYNHHL AVN+VTF D+N +F STSDDKK+L+WEW IPVPIKYI+EP MHSMPAVT P GGF A QSL+N I +++ RD+FK+ KKVF+GH AG+ACQ FSPN +Y+ SGDGEGKL FWD+K T+ + K RAHD GP +G WHP+E S + SCGWDGLIK W+ Sbjct: 194 GIWAPYKDKSKHLTDAEQGTMNEQQKALREEHXXXXXXXXXXKEEG-DEEMDFDRMVEKKTSHLLPSRLKAGQTALEGKSTFLGDQKYDYQGRAWVEPPRSLKPDDGDHQVFLPKRCVHKWTGHTKGVQAIELFPKYGHLLLSGSMDNTLRIWDVYNERKCQRVYEGHSGAVRGINFSRDGKQFLSCSFDRFIQLWDTETGQAVHSFTTRRVPYCVKFYPLDNTQFVVGDSNNMVVQFDTRSGEIVQEYNHHLQAVNSVTFVDDNKRFVSTSDDKKLLVWEWGIPVPIKYISEPSMHSMPAVTLHPSGGFFAGQSLNNQIDVYTARDKFKINRKKVFRGHQNAGYACQIGFSPNGQYVMSGDGEGKLVFWDWKTTKMVKKLRAHDRGPTMGAIWHPLEPSKIVSCGWDGLIKYWD 607
BLAST of NO01G05170 vs. NCBI_GenBank
Match: ETI32540.1 (hypothetical protein F443_20670 [Phytophthora parasitica P1569]) HSP 1 Score: 490.7 bits (1262), Expect = 6.800e-135 Identity = 235/415 (56.63%), Postives = 288/415 (69.40%), Query Frame = 0 Query: 233 GPWAPVKG-GPVLTELEAGTLTEEQKRHRKE----LAERKALKHRGYDEEEDHDRRDERKVAHLLPPRHDRDTVASEPSTQFHGKGQKDYQGRSWVEPPAGLREVETDHPCYLPKRCTHRYAGHEKGVQAIEFSPGTGHLLLSGSLDGTCKMWSVYGERQLRRTYSGHGAAVRCINFNADGTRFLSGGFDRFLRLWDTETGQCISTVTNRKVPYAAKFYPPNDKLFVFAASDNRLYTFDWTSGEMVQEYNHHLSAVNTVTFYDNNTKFASTSDDKKMLLWEWDIPVPIKYIAEPGMHSMPAVTPSPDGGFVACQSLDNTIKIFSCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRSLAKYRAHDNGPCIGLTWHPVESSMVASCGWDGLIKLWE 643 G WAP K LT+ E GT+ E+QK R+E K G DEE D DR E+K +HLLP R A E + F G + DYQGR+WVEPP L+ + DH +LPKRC H++ GH KGVQAIE P GHLLLSGS+D T ++W VY ER +R Y GH AVR INF+ DG +FLS FDRF++LWDTETGQ + + T R+VPY KFYP ++ FV S+N + FD SGE+VQEYNHHL AVN+VTF D+N +F STSDDKK+L+WEW IPVPIKYI+EP MHSMPAVT P GGF A QSL+N I +++ RD+FK+ KKVF+GH AG+ACQ FSPN +Y+ SGDGEGKL FWD+K T+ + K RAHD GP +G WHP+E S + SCGWDGLIK W+ Sbjct: 194 GIWAPYKDKSKHLTDAEQGTMNEQQKALREEHXXXXXXXXXXKEEG-DEEMDFDRMVEKKTSHLLPSRLKAGQTALEGKSTFLGDQEYDYQGRAWVEPPRSLKPDDGDHQVFLPKRCVHKWTGHTKGVQAIELFPKYGHLLLSGSMDNTVRIWDVYNERTCQRVYEGHSGAVRGINFSRDGKQFLSCSFDRFIQLWDTETGQAVHSFTTRRVPYCVKFYPLDNTQFVVGDSNNMVVQFDTRSGEIVQEYNHHLQAVNSVTFVDDNKRFVSTSDDKKLLVWEWGIPVPIKYISEPSMHSMPAVTLHPSGGFFAGQSLNNQIDVYTARDKFKINRKKVFRGHQNAGYACQIGFSPNGQYVMSGDGEGKLVFWDWKTTKMVKKLRAHDRGPTMGAIWHPLEPSKIVSCGWDGLIKYWD 607 The following BLAST results are available for this feature:
BLAST of NO01G05170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G05170 ID=NO01G05170|Name=NO01G05170|organism=Nannochloropsis oceanica|type=gene|length=1929bpback to top protein sequence of NO01G05170.1 >NO01G05170.1-protein ID=NO01G05170.1-protein|Name=NO01G05170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=643bpback to top Synonyms
Publications
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