Naga_100083g16, gene1176 (gene) Nannochloropsis gaditana

Overview
NameNaga_100083g16
Unique Namegene1176
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:92906..95273 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100083g16
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:92906..95273 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL091ngnoL091Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G05170NO01G05170Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1221rna1221-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1221rna1221Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1221

>rna1221-protein ID=rna1221-protein|Name=rna1221|organism=Nannochloropsis gaditana|type=polypeptide|length=612bp
MDTITNAYGSDSDTESTPTGVSSSAPTSTLSSSVSGPPGGPYLVNRSVNS
APFVNPALKTVMNRPGFIPPTSRELTTNVKAATLLAPIQGPEHPFRREMD
SMGGTKLATGGYKEDAVMEKWNFHEQFHTFHAQGYARDDVAGGIIGNVHN
YMRKEGLRDPAGPTAINAGRVTKPSGSTALEPVSRRKRKGVEEDEDLGEE
EDGPWAPAKEEPVITQLEAGTLTEEQKRHRAELAERKAAKHRGYDEDEDL
DRRDERKVAHLLPPRHDRDTVASEPTTQFHGKGESDYQGRSWVEPPGGLR
PVETDHACYLPKRCVHRYTGHGKGVQAIEFFPGTGHLLLSASLDGTCKVW
SVYDERQLRRTYSGHTAAVRCINFSPDGSRFLSGGFDRFLRLWDTETGQC
ISTITNRKVPYAAKFYPPNDNLFIFAASDNRLYTYDWSSGEMVQEYNHHL
SAVNTVTFYDNNSRFASTSDDKKMLLWEWDISVPIKYIAEPGMHSMPAVT
PSPAGDFVACQSLDNTIKIFGCRDRFKLLHKKVFKGHTIAGFACQPAFSP
NNRYLASGDGEGKLHFWDFKNTRALAKYRAHDNGPCIGLVWHPVEASMVA
SCGWDGLIKLWE
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Synonyms
Publications