NO01G04830, NO01G04830 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G04830 vs. NCBI_GenBank
Match: EWM29390.1 (beta-glucan-binding protein [Nannochloropsis gaditana]) HSP 1 Score: 467.6 bits (1202), Expect = 3.800e-128 Identity = 221/278 (79.50%), Postives = 242/278 (87.05%), Query Frame = 0 Query: 97 LHLKGVAWLLGVAVVVAAALFGLLALRRSHAVDSVPFSHVTHPLQPTALWGAVRRPYPTGAWWTNLVLNKGDNNVAVLPYAIKATDDNGLQISYSYFRHLSTKMVQADLFAPDMAMAAVENTGTHYIESYDPLSVGLVFPTVNHLQHNRPSYYRTHLVRGCPYLTVEYYGCHPLVTAANMITVINGLQYREEATFQAPALTGSVFEITVISGQQWMLFAEPAITFRWTKDGKLTSISSYTGFLRIAVAPVEGIKPVLVEHWRAYPTGGDVSLDYPGGG 375 +HLKG AWL+GVAVVVA LFG+LALRRS D VPF+HV+HPLQPTALWGAVR+PYPTGAWWTNLVLNKGDNNVAVLPYA+KATD GLQ+SYS FRHLST MV ADLFAPDM++A VEN THY+ESYDPLSVGLVFPTV HLQ NRPSYYRTHLVRGCPY+TVEYYGC P V A NMITVINGL +RE ATFQA ALTGSVF+ITVISGQ WMLFAEP IT WT DG LT++ YTGFLR+AVAPVE +KPVLV+HW YPTGG+VSL+YPG G Sbjct: 77 VHLKGTAWLVGVAVVVALGLFGVLALRRSRGHDPVPFAHVSHPLQPTALWGAVRKPYPTGAWWTNLVLNKGDNNVAVLPYAVKATDTEGLQVSYSAFRHLSTAMVIADLFAPDMSLATVENATTHYVESYDPLSVGLVFPTVLHLQGNRPSYYRTHLVRGCPYVTVEYYGCRPRVKAPNMITVINGLLFRENATFQAAALTGSVFDITVISGQHWMLFAEPPITLVWTIDGSLTAVEPYTGFLRVAVAPVEKVKPVLVKHWHTYPTGGEVSLEYPGRG 354
BLAST of NO01G04830 vs. NCBI_GenBank
Match: CBN75440.1 (Endo-1,3-beta-glucanase, family GH81 [Ectocarpus siliculosus]) HSP 1 Score: 149.4 bits (376), Expect = 2.300e-32 Identity = 100/284 (35.21%), Postives = 150/284 (52.82%), Query Frame = 0 Query: 106 LGVAVVVAAALFGLLAL----RRSHAVDSV------PFSHVT-HPLQPTALWGAVRRPYPTGAWWTNLVLNKGDNNVAVLPYAIKATDDNGLQISYSYFRHLSTKMVQADLFAPDMAMAAVENTGTHYIESYDPLSVGLVFPTVNHLQHNRPSYYRTHLVRGCPYLTVEYYGCHPLVTAANMITVINGLQYREEATFQAPALTGSVFEITVISGQQWMLFAEPAITFRWTKDGKLTSISSYTGFLRIAVAP----VEGIKPVLVEHWRAYPTGGDVSLDYPGGG 375 L + V++ + GL+AL R S S+ PF+ T H L+P LWGAV PYPTGAWW NL + +GD VA LPY IK++ D G+ +SYS R + + AD +A D++++A E +I YD L+V L N +RT L RG PY+T E+ G P + A I ING + A +L + F++ + + + W++F ++T++ T ++ + ++G +R+AV P EG + L EH AYP GG V+ D G G Sbjct: 84 LYLCVLLVVGVSGLVALSGVFRNSPGSVSLETDAAFPFTTTTKHLLRPGPLWGAVTGPYPTGAWWLNLAIGEGDFPVAPLPYTIKSS-DAGVGVSYSAMRRVESLERVADAYAADLSVSAKEGVTGRHIVKYDNLTVTLQHDAANE------GNFRTLLARGSPYMTFEFAGATPRIKANGDILEINGKKAEAGA-----SLFATTFKLALSNWETWVVFTSESVTWKVTSLQEVEMKAPFSGIVRVAVLPHPWDSEG-EMTLSEHAYAYPRGGRVAFDVDGDG 354
BLAST of NO01G04830 vs. NCBI_GenBank
Match: XP_023330002.1 (probable endo-1,3(4)-beta-glucanase ARB_01444 [Eurytemora affinis]) HSP 1 Score: 141.7 bits (356), Expect = 4.700e-30 Identity = 86/273 (31.50%), Postives = 141/273 (51.65%), Query Frame = 0 Query: 106 LGVAVVVAAALFGLLALRRSH-AVDSVPFSHVTHPLQPTALWGAV-RRPYPTGAWWTNLVLNKGDNNVAVLPYAIKATDDNGLQISYSYFRHLSTKMVQAD----LFAPDMAMAAVENTGTHYIESYDPLSVGLVFPTVNHLQHNRPSYYRTHLVRGCPYLTVEYYGCHPLVTAANMITVINGLQYREEATFQAPALTGSVFEITVISGQQWMLFAEPAITFRWTKDGKLTSISSYTGFLRIAVAPVEGIKPVLVEHWRAYPTGGDVSLDYPG 373 LG+ +++ ++G+ L S A D PF + H +QP WGA +RPYPT AWWTNLV G+N +PY +K DD G+ +S+ S K+V+A F P++ + A+E G+ + ++DPLSV + + V VRG PY+T +Y G P++ + + + +NG EA +TG+ F++ + +GQ WM++ ++F + L++ +TG LR+A P L H + P GG+V+ + G Sbjct: 5 LGLGLLLLGPVYGVNILGGSPLATDEPPFEKLDHNVQPDERWGAAGQRPYPTNAWWTNLVFGSGENLANPMPYQVKTLDD-GVHVSF------SNKVVEAKYIFMAFVPNIIITAMEGMGSRVLSAWDPLSVTMAYDKVEF-----------PFVRGSPYITAKYSGKTPILASTHAVISVNG-----EAV--GSQITGNKFDVDLNNGQHWMVYTSSDVSF-YVNSDSLSASGPFTGTLRVACVPPGENSADLDAHAGSIPIGGEVTAESAG 251
BLAST of NO01G04830 vs. NCBI_GenBank
Match: WP_082362911.1 (hypothetical protein [Chondromyces crocatus] >AKT41788.1 uncharacterized protein CMC5_059990 [Chondromyces crocatus]) HSP 1 Score: 123.6 bits (309), Expect = 1.300e-24 Identity = 83/251 (33.07%), Postives = 121/251 (48.21%), Query Frame = 0 Query: 124 RSHAVDSVPFSHVTHPLQPTALWGAVRRPYPTGAWWTNLVLNKGDNNVAVLPYAIKATDDN-GLQISYSYFRHLSTKMVQADLFAPDMAMAAVENTGTHYIESYDPLSVGLVFPTVNHLQHNRPSYYRTHLVRGCPYLTVEYYGCHPLVTAAN-MITVINGLQYREEATFQAPALTGSVFEITVISGQQWMLFAEPAITFRWTKDGKLTSISSYTGFLRIAVAPVEGIKPVLVEHWRAYPTGGDVSLDYPG 373 ++ A + PF++VTHPLQPT LWG++ PT A W N+VL GD + PY +KA G+ + LS AD+ + + AVE H + +D LS L + + T +V G PY+T +Y G P +T I +NG + ++G+ FEIT+ +GQ W+L+A IT G L++ S+YTG LR+A+ VL +H A PTGG G Sbjct: 266 QAFATTAPPFTNVTHPLQPTGLWGSIGGARPTNASWLNVVLGSGDERIPQWPYTVKAQAQTLGVSLPGRMVAALSI-TTGADV---HVQLGAVETFSGHVLTGHDALSATLRW-------NASGGSMTTPIVYGAPYVTAQYAGLRPRITTGGPAILSVNG--------SGSGNVSGTRFEITLNNGQTWLLYATSNITLSVATSG-LSATSAYTGALRVALRQSAAAATVLDQHAAAIPTGGSFGASVNG 496
BLAST of NO01G04830 vs. NCBI_GenBank
Match: KYF77471.1 (hypothetical protein BE17_31715 [Sorangium cellulosum]) HSP 1 Score: 120.6 bits (301), Expect = 1.100e-23 Identity = 82/236 (34.75%), Postives = 112/236 (47.46%), Query Frame = 0 Query: 133 FSHVTHPLQPTALWGAVRRPYPTGAWWTNLVLNKGDNNVAVLPYAIKATDDNGLQISYSYFRHLSTKMVQADLFAPDMAMAAVENTGTHYIESYDPLSVGLVFPTVNHLQHNRPSYYRTHLVRGCPYLTVEYYGCHPLVTAAN--MITVINGLQYREEATFQAPALTGSVFEITVISGQQWMLFAEPAITFRWTKDGKLTSISSYTGFLRIAVAPVEGIKPVLVEHWRAYPTGGDV 367 F+ HPL P A+ G + P PT W N L +GD + PY +KA GL IS S + DL + ++A + H I S+DPLSV + + + +V G PY+T Y G P V A + IT +NG E+T +TG FEI + +GQ W+L+A PAI+F W + S YTG LR+A+ P VL EH P GGD+ Sbjct: 73 FAPAPHPLDPGAVLGELDTPLPTNTTWMNFALGEGDQRINAAPYDLKAL-GQGLSISRPGVVVASASVTTPDL--TQLGLSARQAFTGHVIRSFDPLSVTVEWAA-------QGGTMTAPIVYGMPYVTTMYDGLTPSVRAGDGVAITSVNG-----EST-SPTEVTGDRFEIELNNGQTWVLYASPAISFEWDALA-MNSEEPYTGSLRLALVPGPNAAAVLDEHAAVIPVGGDI 291
BLAST of NO01G04830 vs. NCBI_GenBank
Match: OQS03747.1 (hypothetical protein THRCLA_03957 [Thraustotheca clavata]) HSP 1 Score: 116.3 bits (290), Expect = 2.100e-22 Identity = 88/266 (33.08%), Postives = 127/266 (47.74%), Query Frame = 0 Query: 111 VVAAALFGLLALRRSHAVDSVPFSHVTHPLQ------PTALWGAVRRPYPTGAWWTNLVLNKGDNNVAVLPYAIKATDDNGLQISYSYFRHLSTKMVQADLFAPDMAMAAVENTGTHY--IESYDPLSVGLVFPTVNHLQHNRPSYYRTHLVRGCPYLTVEYYGCHPLVTAANMITVINGLQYREEATFQAPALTGSVFEITVISGQQWMLFAEPAITFRWTKDG-KLTSISSYTGFLRIAVAPVEGIKPVLVEHWRAYPTGGDVS 368 + A LF LL S + P+ + THPLQ P A+ RP+PTGA+WTNL+L G+ VA LPY IK D N LQISY + ++V +D V + GT + I+ YD LSV + F N HL RG PY+TVEY G P++++A I + T + E+ + + +W+LF IT WT +G K ++Y G LR + + +P+L +H YP G ++ Sbjct: 1 MAGAVLFMLLWAIAS----AFPYQNATHPLQDVLNSFPLAI---ATRPFPTGAFWTNLLL--GNEAVASLPYTIK-VDTNQLQISYPF------RVVTSDSIIEGFTAEIVLDVGTEHLTIQRYDELSVTVAFSKDN-------GNILLHLARGSPYITVEYKGATPVLSSALQIMSMTN------------DATNGLTEVVLGNWHKWLLFTSNPIT--WTANGSKYVGPTNYQGVLRFGLELSKVFRPILAQHAATYPVGATIT 229
BLAST of NO01G04830 vs. NCBI_GenBank
Match: XP_012200299.1 (hypothetical protein SPRG_20067 [Saprolegnia parasitica CBS 223.65] >KDO28959.1 hypothetical protein SPRG_20067 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 115.5 bits (288), Expect = 3.600e-22 Identity = 85/246 (34.55%), Postives = 121/246 (49.19%), Query Frame = 0 Query: 128 VDSVPFSHVTHPLQPTALW---GAVRRPYPTGAWWTNLVLNKGDNNVAVLPYAIKATDDNGLQISYSYFRHLSTKMVQADLFAPDMAMAAVENTGTH--YIESYDPLSVGLVFPTVNHLQHNRPSYYRTHLVRGCPYLTVEYYGCHPLVTAANMITVINGLQYREEATFQAPALTGSVFEITVISGQQWMLFAEPAITFRWTKDGK-LTSISSYTGFLRIAVAPVEGIKPVLVEHWRAYPTGGDVS 368 +D P+ +VTHPLQ P+PTGA+WTN VL G+ VA LPY++K D LQISY + ++V A V + G + YD LSV L F L HLVRG PY+T+EY G PL+++A + L +++ PA S E+ + + +W+LFA + +WT+DGK SSY G LR+ + G +P+L +H YP G +S Sbjct: 1 MDGGPYVNVTHPLQAPRSHLHPSIAGSPFPTGAFWTNFVL--GNEAVASLPYSVKVIDQQ-LQISYPF------RVVTAANIIEGFTAELVVDVGASPLVVVRYDALSVTLSFQDGGIL---------LHLVRGSPYITLEYKGATPLLSSA-----LEMLSLKDD-----PAHNCS--ELLLGNWHKWLLFASSPM--QWTRDGKTFRGPSSYNGVLRLGLELYSGARPLLAQHASTYPVGAAIS 214
BLAST of NO01G04830 vs. NCBI_GenBank
Match: GAY04143.1 (Hypothetical protein PINS_011966, partial [Pythium insidiosum]) HSP 1 Score: 112.5 bits (280), Expect = 3.100e-21 Identity = 77/262 (29.39%), Postives = 122/262 (46.56%), Query Frame = 0 Query: 121 ALRRSHAVDSVPFS------HVTHPLQPTALWGAVR------RPYPTGAWWTNLVLNKGDNNVAVLPYAIKATDDNGLQISYSYFRHLSTKMVQADLFAPDMAMAAVENTGTHYIESYDPLSVGLVFPTVNHLQHNRPSYYRTHLVRGCPYLTVEYYGCHPLVTAAN--MITVINGLQYREEATFQAPALTGSVFEITVISGQQWMLFAEPAITFRWTKDG--KLTSISSYTGFLRIAVAPVEGIKPVLVEHWRAYPTGGDV 367 A+ AVDS PFS V P T+ + RP+PTGAWWTNLVL++GD V PYA++ D L SY FR ++ ++Q+ + + AA H + +D SV + F + + + + T LVRG P+LT EY P + + + IT + L + + +V+ + + +G W FA + D ++ + + G LR+A+AP + P L++ +PTGG V Sbjct: 3 AITLPFAVDSNPFSISPSLYAVPPPQSGTSTFATASTEHLDGRPFPTGAWWTNLVLDEGDTTVVAFPYALRVRDGK-LHASYP-FRVVTPSVIQSGFVSEIVLGAACPTPPQHQVVEFDVFSVAVDFKS-----NATKTLFTTRLVRGSPFLTTEYSDSKPTIESMDGVQITGLRRLDADAALDSKGRQVPFAVYALQLSNGHVWYAFASDSRIDLVLSDDRRRVEATKPFNGVLRVALAPTQDAFPYLIDSAAVFPTGGAV 257
BLAST of NO01G04830 vs. NCBI_GenBank
Match: GAX95072.1 (Hypothetical protein PINS_002944, partial [Pythium insidiosum]) HSP 1 Score: 112.5 bits (280), Expect = 3.100e-21 Identity = 77/262 (29.39%), Postives = 122/262 (46.56%), Query Frame = 0 Query: 121 ALRRSHAVDSVPFS------HVTHPLQPTALWGAVR------RPYPTGAWWTNLVLNKGDNNVAVLPYAIKATDDNGLQISYSYFRHLSTKMVQADLFAPDMAMAAVENTGTHYIESYDPLSVGLVFPTVNHLQHNRPSYYRTHLVRGCPYLTVEYYGCHPLVTAAN--MITVINGLQYREEATFQAPALTGSVFEITVISGQQWMLFAEPAITFRWTKDG--KLTSISSYTGFLRIAVAPVEGIKPVLVEHWRAYPTGGDV 367 A+ AVDS PFS V P T+ + RP+PTGAWWTNLVL+KGD V PYA++ + LQ SY FR ++ ++Q+ + + AA H + +D LSV ++ + + + THL RG P+LT EY P + + + IT + L + + +V+ + + +G W FA + D ++ + + G LR+ +AP + P L++ +PTGG V Sbjct: 3 AITLPFAVDSNPFSISPSLYAVPPPQSGTSTFATASTEHLDGRPFPTGAWWTNLVLDKGDTTVVAFPYALRVREGK-LQASYP-FRVVTPSVIQSGFVSEIVLGAACPTPPQHQVVEFDVLSV-----AIDLKSNATKTLFTTHLERGSPFLTTEYSDSKPTIESMDGVQITGLRRLDADAALDSKGRQVPFAVYALQLSNGHVWYAFASDSRIDLVLSDDRRRVEATKPFNGVLRVELAPTQDAFPYLIDSAAVFPTGGAV 257
BLAST of NO01G04830 vs. NCBI_GenBank
Match: POM77946.1 (Putative endo-1,3-beta-glucanase, partial [Phytophthora palmivora var. palmivora]) HSP 1 Score: 112.1 bits (279), Expect = 4.000e-21 Identity = 72/262 (27.48%), Postives = 126/262 (48.09%), Query Frame = 0 Query: 131 VPFSHVTHPLQ-PTALWGAVRR---------------------PYPTGAWWTNLVLNKGDNNVAVLPYAIKATDDNGLQISYSYFRHLSTKMVQADLFAPDMAMAAVENT--GTHYIESYDPLSVGLVFPTVNHLQHNRPSYYRTHLVRGCPYLTVEYYGCHPLVTAANMITVINGLQYREEATFQAPALTGSVFEITVISGQQWMLFA-EPAITFRWTKDGKLTSISSYTGFLRIAVAPVEGIKPVLVEHWRAYPTGGDVS 368 +PF +HPLQ ++L+ A R P+PTGAWWTNLVL +G + V +PY K D+ L +S+ FR ++ K ++A + + + +++ H++ ++D F T + +R +LVRG PY+T+EY P+V A + + + + + + + F + +GQ W L+A + + + +G++TS +TG LR+A+ + P L+E Y GGDV+ Sbjct: 30 LPFPVASHPLQLSSSLFAASERLPLDARVANATTTRPKLLADVPFPTGAWWTNLVLAEGQSAVVSMPYVHKILDEK-LHVSFP-FRVVAPKDIEAGFISQMVVSSQTQSSLPLAHHVVNFD------AFSTTVRFSRGQAEEFRVYLVRGSPYVTMEYTQSRPVVEAKDGLMITRFKKLKGLTLMNGDDVPFATFAAELNNGQTWYLYASDKQLKLQLNDNGQVTSDDEFTGVLRVALCNDAKVMPFLLESASVYAVGGDVT 283 The following BLAST results are available for this feature:
BLAST of NO01G04830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G04830 ID=NO01G04830|Name=NO01G04830|organism=Nannochloropsis oceanica|type=gene|length=1185bpback to top protein sequence of NO01G04830.1 >NO01G04830.1-protein ID=NO01G04830.1-protein|Name=NO01G04830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=395bpback to top Synonyms
Publications
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