Naga_100042g33, gene1216 (gene) Nannochloropsis gaditana

Overview
NameNaga_100042g33
Unique Namegene1216
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:175012..178478 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100042g33
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:175012..178478 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL091ngnoL091Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G04830NO01G04830Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1262rna1262-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1262rna1262Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1262

>rna1262-protein ID=rna1262-protein|Name=rna1262|organism=Nannochloropsis gaditana|type=polypeptide|length=828bp
MGGIRKGGNRAAGNSNNTGSSNIVQNLINNSRPSVPPRDNTPLLGIGATE
ASLKSDGSGGGHGSGEIARTNGVGWRVHLKGTAWLVGVAVVVALGLFGVL
ALRRSRGHDPVPFAHVSHPLQPTALWGAVRKPYPTGAWWTNLVLNKGDNN
VAVLPYAVKATDTEGLQVSYSAFRHLSTAMVIADLFAPDMSLATVENATT
HYVESYDPLSVGLVFPTVLHLQGNRPSYYRTHLVRGCPYVTVEYYGCRPR
VKAPNMITVINGLLFRENATFQAAALTGSVFDITVISGQHWMLFAEPPIT
LVWTIDGSLTAVEPYTGFLRVAVAPVEKVKPVLVKHWHTYPTGGEVSLEY
PGRGGVTGGRGSSDSDLMITYRWRRRGEGQLLMLALPHHVEILQDAAFLT
NATDVFQTLKGSMTGVVGDRWYMKEGLPRPLDASDPTKKKKKVTRSHAGR
EHMYGFHAPRGIQDEKALKAVQGAVSEDLAAIKKGGTERWNKTDKSDAYW
AGKRMAMYARLALVAEEVGMEKERKEAVALAAAALEPWLKGSNKNPLVYD
TTWGGLVLQSGLSDPYVNFGNTYYNDHHFQYGYFCYCAAVLARFDPAFVK
RHKGALRALVADIANDDDTSPSFPLARHKDFFDGHSWASGLFEQNNGKSQ
ESSSEAINAYYGAHLYGRATGDVKLENFAKLLLAMEIRSTRWYWHMQNNT
KIYDPIFAANRMAGVVGGLDATCHTWFGASLEYVHGINMMPFTPVTEAVL
DASFVREEYPVLASVLSRSDDPVEEEWKGFIYMDHAVIDPAAAWTEVESL
KRYDTGNSKSNTLWWVATRPGAGGGDSK
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Synonyms
Publications