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Properties
| Property Name | Value |
|---|
| Product | beta-glucan-binding protein |
| Orig transcript id | gnl|cribi|Naga_100042g33.5637.mrna |
| Orig protein id | gnl|cribi|Naga_100042g33.5637 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:175012..178478 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1262 ID=rna1262|Name=rna1262|organism=Nannochloropsis gaditana|type=mRNA|length=2077bp
CATCCAATAAAGTTTCCGGTGAGATCAGGGATTGGAAACCTCATATTTTC
GTTGATTTCCGTACAAGGACAGGGGGATTATATCATGCTTCATCAGAGGG
GACGGGCCACACCAGCACTCATGTGCTTGCTTTTCCTGCTTTTGTTTGCA
CAGCCTGCGGCAAGTGCCATGGCGTCGGAAGCATTCATTCAACCAGCTGC
TTCTTCCTGTGGCTCATCATTCCAGGCCAGCGCCCCGGGCAAAATCTCAT
CCGCTTTCCTCTGTGGCCCGACCTCCTCCCAAATAGCCTCTCCCCTCGCT
AATTTTCTCGAGCGGCCTGTATCACAAGAAGCGGGACGCACAAGACAGCA
GACCATGGCACTACCAAGTATTGGAAGGATTTTGACGGCCGTACCCCGGT
TTGTTGGCCGCAAAATAATGGATGGTGGGGATGCGATTTATGTCAAGAAA
AGTCTCTTTCTTCCCCCGGGTAGCCGGAGCAGCGGAACATCGAGCCCTCA
GGAGGACACCTCTTCCCAGCCTCCAACTTCTGTTGAGGCAGACATGGTGC
TTGTTTTATTTCCCGGCATTGGCATGGGTCCCGCTGCTTACCGGGAGACC
GCGCTGGCCATCCAGGATGCTCTGGCTGCAAATTATGACGTGAAGGCCTA
CGTGGTTGTGGCCAAATTCTTCAACAACCTCGGCTACCTGCCTCAAGAAC
CTGAACGCCGTCTAGCGTCCATTCTGACGGAAGTGAGCTTGCGAGGGGTT
TCGGCCCGGGCCCCTGTGGCCGTCGCAGGGCACAGTGCGGGGGCTTTCCT
TGCGTACGAGGCCGCGCTCACACGATCCCAAGCTTTCGTGCACTTGGGGT
CCACACTAAACAGTCGGGGCGTTCTACCATGGAAACCCAGGAGTGTGCTT
GCTTTCCCCAAACCCATCCTCCAACTGCTGGGGGAGATGGACGGCTACAT
TCGTTTCACCGGCGGGGCCTTGGAGTACGCGGAGGTGGAATCCTTGATGG
CCAAGAAAGGCTTCGAAGACGCCCTCCTCGACAAACCCGTCGTCCTTCTC
CCCGGTGTCTCCCACCAACAATTTGGTGACGGCTCTCAGTCCAAAGCCGC
GCGCATGTCGGGCCGGCGGGACCTACCGCCCTACGTCGCTCTCCAAGAAG
CCCACAGGATGACGGGCAAGATCGTCGCCTCTTTTCTGGCCTACCATCTC
TTCCCTTTGAACGGACGGGCCCGTGTGGCAGGTGCCAGTGTCCTCCGCCA
AGCTTTCGAGGCGACGGGGAGGATGGTGCGCCCTTATTTGGACGAGAGCA
CGCCTCAGGCGGAAGACGATTTTATCCGGTGGGCCCAGGCGGAGGTGGCT
TCCGTGGAAGGCGTGGGAAGGAACAGCGTGCGTGCCTTGCTCTATGAAAG
TGAGGGGGAATTCGTTTACTCGAAGCCTTTTTTGGACACGGAAAGCGAGT
ATTTGCAGGTGTGCGTTCGGAAAGTCCAGGAGGCGGCCATTCGGATCGGC
TTTACCAAACAGATCTCTCCAGCGTTGGACTTCAAAATGAAACGGCAAGA
AGCCGTCGTCCAAGCCCTGAGGCGATATCCGTCCAAGAAAGCGCCCACAG
CCGCCGAGCTCAACCATCGAACCTTCCAGAAGGCCTTGGAAAAGGTGAGC
GAGGAAGCCCGGAGGCGCTACGACCGGTACGGACGAAAATTGGAGTTTAT
AGCCGATGACGAGATCACAGCCGAACGAGGAGGGGGTCCGGCTTGGGTCG
CCACGCCTCTGGAAGTGAAAGCGCGCGTGGAGGATCCGATGCGGGTGACA
GTTCGATCCCCGGTCTTGTACACGCCGATCGACACCCTGCCTCGCTTTGC
GGGTATGTGTTATATGAAGCTTTTGACCCCCGCACAGGCAGTGGAGTGGA
TTTGTCACGATGCATATGTCCCCTGGGGGACACCAAAGTGATAGACCCTT
GTCGATGCTCTTGACCACGGTCTCTGGGTCACTCTCGAACCATGTACAGA
TATTTCGCCTTGACAAAAGCACAGCCCCGCAACCCACCGCATTTGATAAG
AAACCGGATTCTATAAGCGGAACATCT back to topprotein sequence of rna1262 >rna1262-protein ID=rna1262-protein|Name=rna1262|organism=Nannochloropsis gaditana|type=polypeptide|length=828bp
MGGIRKGGNRAAGNSNNTGSSNIVQNLINNSRPSVPPRDNTPLLGIGATE
ASLKSDGSGGGHGSGEIARTNGVGWRVHLKGTAWLVGVAVVVALGLFGVL
ALRRSRGHDPVPFAHVSHPLQPTALWGAVRKPYPTGAWWTNLVLNKGDNN
VAVLPYAVKATDTEGLQVSYSAFRHLSTAMVIADLFAPDMSLATVENATT
HYVESYDPLSVGLVFPTVLHLQGNRPSYYRTHLVRGCPYVTVEYYGCRPR
VKAPNMITVINGLLFRENATFQAAALTGSVFDITVISGQHWMLFAEPPIT
LVWTIDGSLTAVEPYTGFLRVAVAPVEKVKPVLVKHWHTYPTGGEVSLEY
PGRGGVTGGRGSSDSDLMITYRWRRRGEGQLLMLALPHHVEILQDAAFLT
NATDVFQTLKGSMTGVVGDRWYMKEGLPRPLDASDPTKKKKKVTRSHAGR
EHMYGFHAPRGIQDEKALKAVQGAVSEDLAAIKKGGTERWNKTDKSDAYW
AGKRMAMYARLALVAEEVGMEKERKEAVALAAAALEPWLKGSNKNPLVYD
TTWGGLVLQSGLSDPYVNFGNTYYNDHHFQYGYFCYCAAVLARFDPAFVK
RHKGALRALVADIANDDDTSPSFPLARHKDFFDGHSWASGLFEQNNGKSQ
ESSSEAINAYYGAHLYGRATGDVKLENFAKLLLAMEIRSTRWYWHMQNNT
KIYDPIFAANRMAGVVGGLDATCHTWFGASLEYVHGINMMPFTPVTEAVL
DASFVREEYPVLASVLSRSDDPVEEEWKGFIYMDHAVIDPAAAWTEVESL
KRYDTGNSKSNTLWWVATRPGAGGGDSK back to topmRNA from alignment at CM002457.1:175012..178478- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna1262 ID=rna1262|Name=rna1262|organism=Nannochloropsis gaditana|type=mRNA|length=3467bp|location=Sequence derived from alignment at CM002457.1:175012..178478- (Nannochloropsis gaditana)
TGCCTCCGTTCCATCTGGGGCCGGCTCCGCATCCTTGTGCGGCCGCTTTC
CGCACCCTTTCGGTGTCGAAGAGGTGCTCTTCGTCTTTTTCTTCATAGAG
TCAGCTGTAAATACGTTCGAGTATGTTTAATGAGGGAGGGACTGAAAGAG
ATATGTGGCAGGACGGAGCGCTCGTAGTATGGCGAGGCACATCGCCATCG
CAATCCGGAGTGTTCCAGCTGTAGAGGAAAATTGCAAACTACACAGCGAA
TGTGTCTGAAAGTGCTGCTCGAATCCTCCTTTGTAGATGATAAAAGATGT
CAGCAGTGCTTGATTGTGCGTCCATTCCAACGGAACTAATTTTATACCAA
CAAATTGCAACCTGTGCGTGTAGAGAGGGTTGCACGCGATATGCGACGAA
CGCCGGAATCAGTGCAGCCAGGAAAGTGAGACAAATCCGACACACAATTC
CGGGTTGCGGGCGTGATCATACTGCCTTTTCAAGCTCATGAGCAACAACG
GGGCCAATCATGGGCATTCTGTGGGAGTGGGCATCAAGGACGGCGGGGGT
TCCGGGGGGGGGGCGGCATGGGGGGGATTCGGAAAGGAGGAAACAGGGCT
GCGGGCAACAGCAACAATACAGGCAGCAGCAACATTGTACAGAATCTCAT
CAATAACAGCCGTCCGTCGGTACCTCCTCGTGACAACACCCCCCTGCTTG
GCATTGGGGCCACGGAGGCCTCTCTGAAATCGGACGGGAGCGGAGGAGGA
CACGGGAGTGGAGAGATAGCCCGGACCAATGGGGTGGGCTGGCGGGTGCA
TTTGAAGGGCACCGCCTGGCTCGTAGGCGTGGCGGTGGTGGTGGCCTTGG
GTCTTTTTGGCGTGCTGGCCTTGCGGCGATCGCGCGGCCACGACCCTGTG
CCTTTTGCCCACGTCTCCCATCCTTTGCAGCCTACGGCCCTGTGGGGTGC
GGTGCGAAAACCTTATCCGACAGGGGCCTGGTGGACGAACTTGGTTTTGA
ACAAGGGCGACAACAACGTGGCGGTCCTCCCGTACGCGGTCAAAGCCACA
GACACGGAGGGCCTTCAGGTGTCCTACTCCGCCTTCCGGCATCTGTCCAC
CGCCATGGTCATTGCGGATTTGTTCGCCCCGGACATGTCCCTGGCCACGG
TCGAAAACGCCACGACGCACTACGTGGAATCCTACGACCCTTTGAGCGTG
GGGCTGGTCTTTCCCACTGTCCTGCATTTGCAAGGGAATCGGCCGTCGTA
CTATCGTACCCACTTGGTCCGAGGGTGCCCCTATGTGACCGTGGAGTACT
ACGGGTGCCGACCTCGGGTCAAGGCGCCGAACATGATCACCGTCATCAAC
GGCTTGCTCTTCCGGGAAAACGCCACCTTCCAAGCCGCTGCTTTGACCGG
CTCGGTCTTCGATATCACCGTCATCAGCGGCCAGCACTGGATGCTCTTCG
CCGAGCCCCCCATCACCTTGGTCTGGACGATCGACGGCTCCCTTACCGCC
GTGGAGCCCTACACCGGCTTCCTGCGCGTGGCCGTGGCGCCGGTGGAGAA
AGTGAAGCCAGTCTTGGTCAAACACTGGCACACGTATCCCACAGGGGGGG
AGGTTTCTTTGGAGTACCCCGGGAGGGGGGGAGTGACCGGGGGGCGGGGA
AGCAGTGACAGTGACTTGATGATCACCTACCGGTGGCGACGGCGGGGGGA
AGGGCAGCTCTTGATGCTGGCCTTGCCCCATCATGTGGAGATTCTGCAGG
ACGCGGCTTTCTTGACGAATGCCACGGATGTTTTTCAGACCTTGAAAGGC
AGTATGACGGGGGTGGTGGGAGACAGATGGTACATGAAGGAAGGATTGCC
ACGTCCGTTGGATGCGAGCGATCCCACGAAGAAGAAGAAGAAGGTCACCC
GGAGTCATGCGGGGAGGGAACACATGTACGGCTTCCACGCGCCGAGGGGC
ATCCAGGACGAGAAGGCGTTGAAGGCCGTGCAGGGGGCGGTCTCGGAGGA
TTTGGCCGCCATCAAGAAGGGCGGCACGGAGCGATGGAACAAAACGGACA
AGAGCGACGCGTATTGGGCGGGGAAACGCATGGCCATGTACGCGCGCTTG
GCCCTGGTGGCGGAGGAGGTTGGGATGGAGAAGGAACGGAAAGAGGCCGT
CGCGCTGGCGGCCGCAGCCCTTGAACCTTGGTTAAAGGGCTCGAACAAGA
ACCCCCTCGTCTACGACACCACCTGGGGGGGCCTGGTGTTGCAGAGTGGG
TTGAGCGACCCCTACGTGAATTTCGGGAATACCTACTATAACGACCATCA
CTTCCAATACGGGTACTTTTGTTACTGCGCGGCCGTGCTGGCCCGTTTCG
ACCCGGCGTTCGTCAAGCGTCATAAAGGGGCTTTGCGGGCCCTGGTCGCC
GACATTGCCAACGACGACGACACCTCTCCTTCCTTTCCCCTTGCCCGGCA
CAAGGATTTCTTCGACGGGCATTCCTGGGCGAGCGGTCTCTTTGAGCAAA
ACAATGGCAAGTCGCAGGAGTCCTCCTCGGAAGCGATCAACGCCTATTAC
GGTGCACATTTGTACGGTCGGGCAACGGGCGATGTGAAGCTGGAAAATTT
TGCCAAGTTGCTCCTGGCCATGGAAATCCGCTCCACGCGTTGGTATTGGC
ACATGCAAAACAACACCAAAATCTACGACCCCATCTTTGCAGCGAATCGG
ATGGCGGGCGTGGTGGGGGGGCTGGACGCTACCTGCCACACCTGGTTCGG
GGCCAGCTTGGAATACGTGCATGGGATCAACATGATGCCCTTCACGCCGG
TGACGGAGGCCGTGTTGGACGCCAGTTTTGTCCGAGAAGAATACCCGGTC
CTGGCCAGCGTCTTGTCCCGGTCGGACGATCCCGTGGAGGAGGAATGGAA
AGGCTTCATTTACATGGACCACGCCGTCATCGATCCGGCTGCCGCCTGGA
CGGAAGTTGAGAGTTTGAAGCGGTATGATACCGGGAACAGTAAGAGCAAC
ACGCTATGGTGGGTGGCGACCCGTCCGGGCGCTGGAGGTGGGGACTCCAA
GTAGGGAAGGGGAAGAGCATGGGACGTTTATTACTCGTAGATGGAAGAAA
GCAGTCATGATTGAAAAAGTAAAACCTGTCGCCAGCCATTCAGTTGGACT
GGGGGGGGGGGACAAGGTTAGGTCACAGGGGCCAATGCGAAAAGGTGGAG
GGAAAGCAGTAGTCAACAGATGGAGTGTAGAGCAAAGACGAAGGGGCGTC
GAGCATGCGGTGGGGAAAAGGAGGAAGGCCAAGGACCACCCGTTCGTGTA
GGTTTCTGGATTGGGTGGTCGCGTGGGCGGAATTGAAGGGGAAAATGAGG
CTGTCGAGATAGTCAGAGAGGGATTCCTTTCTCAAAATGATGCATCTGTC
TTTCCCAGTAGGCCATCTCTTGGATCGACAAAAATGAAAAAAGGGCAACG
AAAACGAACCAATCAGA back to topCoding sequence (CDS) from alignment at CM002457.1:175012..178478- >rna1262 ID=rna1262|Name=rna1262|organism=Nannochloropsis gaditana|type=CDS|length=2487bp|location=Sequence derived from alignment at CM002457.1:175012..178478- (Nannochloropsis gaditana)
ATGGGGGGGATTCGGAAAGGAGGAAACAGGGCTGCGGGCAACAGCAACAA
TACAGGCAGCAGCAACATTGTACAGAATCTCATCAATAACAGCCGTCCGT
CGGTACCTCCTCGTGACAACACCCCCCTGCTTGGCATTGGGGCCACGGAG
GCCTCTCTGAAATCGGACGGGAGCGGAGGAGGACACGGGAGTGGAGAGAT
AGCCCGGACCAATGGGGTGGGCTGGCGGGTGCATTTGAAGGGCACCGCCT
GGCTCGTAGGCGTGGCGGTGGTGGTGGCCTTGGGTCTTTTTGGCGTGCTG
GCCTTGCGGCGATCGCGCGGCCACGACCCTGTGCCTTTTGCCCACGTCTC
CCATCCTTTGCAGCCTACGGCCCTGTGGGGTGCGGTGCGAAAACCTTATC
CGACAGGGGCCTGGTGGACGAACTTGGTTTTGAACAAGGGCGACAACAAC
GTGGCGGTCCTCCCGTACGCGGTCAAAGCCACAGACACGGAGGGCCTTCA
GGTGTCCTACTCCGCCTTCCGGCATCTGTCCACCGCCATGGTCATTGCGG
ATTTGTTCGCCCCGGACATGTCCCTGGCCACGGTCGAAAACGCCACGACG
CACTACGTGGAATCCTACGACCCTTTGAGCGTGGGGCTGGTCTTTCCCAC
TGTCCTGCATTTGCAAGGGAATCGGCCGTCGTACTATCGTACCCACTTGG
TCCGAGGGTGCCCCTATGTGACCGTGGAGTACTACGGGTGCCGACCTCGG
GTCAAGGCGCCGAACATGATCACCGTCATCAACGGCTTGCTCTTCCGGGA
AAACGCCACCTTCCAAGCCGCTGCTTTGACCGGCTCGGTCTTCGATATCA
CCGTCATCAGCGGCCAGCACTGGATGCTCTTCGCCGAGCCCCCCATCACC
TTGGTCTGGACGATCGACGGCTCCCTTACCGCCGTGGAGCCCTACACCGG
CTTCCTGCGCGTGGCCGTGGCGCCGGTGGAGAAAGTGAAGCCAGTCTTGG
TCAAACACTGGCACACGTATCCCACAGGGGGGGAGGTTTCTTTGGAGTAC
CCCGGGAGGGGGGGAGTGACCGGGGGGCGGGGAAGCAGTGACAGTGACTT
GATGATCACCTACCGGTGGCGACGGCGGGGGGAAGGGCAGCTCTTGATGC
TGGCCTTGCCCCATCATGTGGAGATTCTGCAGGACGCGGCTTTCTTGACG
AATGCCACGGATGTTTTTCAGACCTTGAAAGGCAGTATGACGGGGGTGGT
GGGAGACAGATGGTACATGAAGGAAGGATTGCCACGTCCGTTGGATGCGA
GCGATCCCACGAAGAAGAAGAAGAAGGTCACCCGGAGTCATGCGGGGAGG
GAACACATGTACGGCTTCCACGCGCCGAGGGGCATCCAGGACGAGAAGGC
GTTGAAGGCCGTGCAGGGGGCGGTCTCGGAGGATTTGGCCGCCATCAAGA
AGGGCGGCACGGAGCGATGGAACAAAACGGACAAGAGCGACGCGTATTGG
GCGGGGAAACGCATGGCCATGTACGCGCGCTTGGCCCTGGTGGCGGAGGA
GGTTGGGATGGAGAAGGAACGGAAAGAGGCCGTCGCGCTGGCGGCCGCAG
CCCTTGAACCTTGGTTAAAGGGCTCGAACAAGAACCCCCTCGTCTACGAC
ACCACCTGGGGGGGCCTGGTGTTGCAGAGTGGGTTGAGCGACCCCTACGT
GAATTTCGGGAATACCTACTATAACGACCATCACTTCCAATACGGGTACT
TTTGTTACTGCGCGGCCGTGCTGGCCCGTTTCGACCCGGCGTTCGTCAAG
CGTCATAAAGGGGCTTTGCGGGCCCTGGTCGCCGACATTGCCAACGACGA
CGACACCTCTCCTTCCTTTCCCCTTGCCCGGCACAAGGATTTCTTCGACG
GGCATTCCTGGGCGAGCGGTCTCTTTGAGCAAAACAATGGCAAGTCGCAG
GAGTCCTCCTCGGAAGCGATCAACGCCTATTACGGTGCACATTTGTACGG
TCGGGCAACGGGCGATGTGAAGCTGGAAAATTTTGCCAAGTTGCTCCTGG
CCATGGAAATCCGCTCCACGCGTTGGTATTGGCACATGCAAAACAACACC
AAAATCTACGACCCCATCTTTGCAGCGAATCGGATGGCGGGCGTGGTGGG
GGGGCTGGACGCTACCTGCCACACCTGGTTCGGGGCCAGCTTGGAATACG
TGCATGGGATCAACATGATGCCCTTCACGCCGGTGACGGAGGCCGTGTTG
GACGCCAGTTTTGTCCGAGAAGAATACCCGGTCCTGGCCAGCGTCTTGTC
CCGGTCGGACGATCCCGTGGAGGAGGAATGGAAAGGCTTCATTTACATGG
ACCACGCCGTCATCGATCCGGCTGCCGCCTGGACGGAAGTTGAGAGTTTG
AAGCGGTATGATACCGGGAACAGTAAGAGCAACACGCTATGGTGGGTGGC
GACCCGTCCGGGCGCTGGAGGTGGGGACTCCAAGTAG back to top
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