NO01G04680, NO01G04680 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO01G04680
Unique Name	NO01G04680
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2352
Alignment location	chr1:1235151..1237623 +

Link to JBrowse

Properties


Property Name	Value
Description	Ion channel

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr1	genome	chr1:1235151..1237623 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016054	2021-01-14
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom
IPR036869	J_dom_sf
IPR013026	TPR-contain_dom
IPR001440	TPR_1
IPR019734	TPR_repeat
IPR001623	DnaJ_domain

Homology

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BLAST of NO01G04680 vs. NCBI_GenBank
Match: EWM29408.1 (ion channel [Nannochloropsis gaditana])

HSP 1 Score: 509.6 bits (1311), Expect = 1.000e-140
Identity = 267/374 (71.39%), Postives = 306/374 (81.82%), Query Frame = 0

Query:   71 VKALNKARDILQEARPSPNGGNGSSSSNAIARKRLFLQANTLLDVCLALAPSSFDAKLLKLECQVGLGQYDDAFNSSNHLLRLAPSLAPLLHLRATCLYRLGNLENSIKHSQQAVRSDPDNASYVALLKQVRSLDNKKKEGDTAFTHGQYQKAIQAWTEALAVDPTHKQICAKLYNNRATAYAKMRRHADAVSDCKQALALDPQYLKALKRKAESLFVLGGEENLEQCLRDYETAAGLAPEEEEREYARKMHQAKVALKRAKRKDYYRLLGLSSDATEDEIRKAYRKLALKHHPDRHTSSSEEEKAKAEKEFKNVAEAYEVLSDKEKKARYDSGVDIEDLDNPHAH-GPSRGGGFGGMGGGGIDPNILFQMFMQ 444
            +KA  KA ++LQE R   +    +  +     KR F++AN L+D CL+LA +S   +LLKLECQVGLGQY++AF  SNHLLRL+PSLAPLL+LRA CLY LGN E ++KH QQAVRSDPDN +YV+LLK+VR+LD KKKEGDT FT GQYQ AI AWTEALAVDP+ K + AK++NNRATAYAKMR+H +AV+DCK+ALALDPQYLKALKRKAESL+ LGGEENLEQCLRDYE AA LAP  EEREYARKMHQ KVALKRAKRKD YR+LGLS+DATEDEIRKAYRKLALKHHPDRHT+SSEE KA AEK FK+VAEAYEVLSDKEK++RYDSG D+EDLDNP A  G   GG         IDPN+LFQMFMQ
Sbjct:  127 MKAGAKATELLQETRGPGSSTLQNGQNGGAVHKRNFVRANALVDQCLSLASASPQVRLLKLECQVGLGQYEEAFAGSNHLLRLSPSLAPLLYLRAVCLYHLGNFEGALKHLQQAVRSDPDNHAYVSLLKKVRALDAKKKEGDTCFTQGQYQPAIDAWTEALAVDPSQKAVNAKMFNNRATAYAKMRKHTEAVADCKRALALDPQYLKALKRKAESLYALGGEENLEQCLRDYEAAARLAPASEEREYARKMHQVKVALKRAKRKDLYRILGLSTDATEDEIRKAYRKLALKHHPDRHTNSSEEAKAAAEKAFKDVAEAYEVLSDKEKRSRYDSGTDVEDLDNPQAQAGSHAGGXXXXXXXXXIDPNVLFQMFMQ 500

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BLAST of NO01G04680 vs. NCBI_GenBank
Match: CBJ26057.1 (Heat shock protein 40 like protein [Ectocarpus siliculosus])

HSP 1 Score: 386.0 bits (990), Expect = 1.700e-103
Identity = 209/441 (47.39%), Postives = 296/441 (67.12%), Query Frame = 0

Query:    1 MMILAYESAIEDCDKAIALSPGMVKAYFRKGKALAILGKFDESIAAYRAGLQQDPNNAQGHSEKTEVETAVKALNKARDILQEARPSPNGGNGSSSSNAIARKRLFLQANTLLDVCLALAPSSFDAKLLKLECQVGLGQYDDAFNSSNHLLRLAPSLAPLLHLRATCLYRLGNLENSIKHSQQAVRSDPDNASYVALLKQVRSLDNKKKEGDTAFTHGQYQKAIQAWTEALAVDPTHKQICAKLYNNRATAYAKMRRHADAVSDCKQALALDPQYLKALKRKAESLFVLGGEENLEQCLRDYETAAGLAPEEEEREYARKMHQAKVALKRAKRKDYYRLLGLSSDATEDEIRKAYRKLALKHHPDRHTSSSEEEKAKAEKEFKNVAEAYEVLSDKEKKARYDSGVDIEDLDNPHAHGPSRGGGFGGMGGGGIDPNILFQMF 442
            +MIL YE AI DCD+A+ L+P    A FRK  AL  LG+F ES++A + GL  DPNNA    EKT  E  V+ +++A D L + +P+                    +A ++L+ CL  AP S + KL+K+EC +G+G++++A+  S+ L+R + + + LL  RA CLY +GNL+++IKH Q+A R DPDN+ Y  L+K+ + +++ K+ G+ AF     + AI++W EAL VD T+K   +KLY NRA AYAK+ +H +AV++  +AL+ DP Y KA +R+A SL+ +GG ENLE   RDYE    + P+E++RE   K+ + K A+K+AKRKDYY+LLG+S  A + EI+KAYRK ALK+HPDR +S ++EEK +A K F+++AEAYEVLSD  KK RYDSGVD+EDLDNPHA     G G GGM    IDP++LF MF
Sbjct:  101 VMILGYEQAILDCDRAVELNPKFANAIFRKAMALKKLGRFKESLSALQQGLLVDPNNADQIKEKTNTEMCVRKVHRATDSLAQGKPA--------------------RAASILEECLVKAPQSRELKLIKVECLMGMGKHEEAYAMSSTLIRNSQNNSKLLITRARCLYLMGNLDSAIKHLQEAARQDPDNSEYRGLIKKYKLMESTKEAGNKAFKANDLEGAIRSWGEALTVDKTNKSFNSKLYCNRAAAYAKLSKHQEAVAEASRALSDDPTYTKAYERRATSLYDMGGVENLEAACRDYEKLMDMIPDEKQREIQGKIRKTKAAVKQAKRKDYYKLLGVSRSADDAEIKKAYRKAALKYHPDRQSSKTDEEKEQAGKVFRDIAEAYEVLSDPTKKGRYDSGVDLEDLDNPHA---GHGQGHGGM---EIDPSMLFHMF 515

[Close]

BLAST of NO01G04680 vs. NCBI_GenBank
Match: XP_009825970.1 (hypothetical protein H257_03532 [Aphanomyces astaci] >ETV84278.1 hypothetical protein H257_03532 [Aphanomyces astaci])

HSP 1 Score: 327.0 bits (837), Expect = 9.300e-86
Identity = 173/417 (41.49%), Postives = 266/417 (63.79%), Query Frame = 0

Query:    1 MMILAYESAIEDCDKAIALSPGMVKAYFRKGKALAILGKFDESIAAYRAGLQQDPNNAQGHSEKTEVETAVKALNKARDILQEARPSPNGGNGSSSSNAIARKRLFLQANTLLDVCLALAPSSFDAKLLKLECQVGLGQYDDAFNSSNHLLRLAPSLAPLLHLRATCLYRLGNLENSIKHSQQAVRSDPDNASYVALLKQVRSLDNKKKEGDTAFTHGQYQKAIQAWTEALAVDPTHKQICAKLYNNRATAYAKMRRHADAVSDCKQALALDPQYLKALKRKAESLFVLGGEENLEQCLRDYETAAGLAPEEEEREYARKMHQAKVALKRAKRKDYYRLLGLSSDATEDEIRKAYRKLALKHHPDRHTSSSEEEKAKAEKEFKNVAEAYEVLSDKEKKARYDSGVDIEDLDNPHAHG 418
            +M+  ++ AI D  +AIA+ P  ++ Y RK KA   LG  + ++  Y++GL +DPNNA   +++   E A+  + + R+ ++  +                    F +     D  L +  SS D K  + E  +G  +YD+AF     L+R   S   +L LRA CLY  G   ++I+H Q+A+R+DPDN+ +V  +K++RSLD +K+  + AF  G+YQ+A+ A++  LA+DPT+K   AKL+ NRA A AK+ ++A+A+ DC +A+  D  Y+KA  RKA+ L  +GG++NLEQ LR+YETA+ L  E+++R+YA+ +   K+ +K+AKRKDYY++L +  +A E +I+KAYRK ALK+HPDRH + +EEE+ +AE +FK+V EAY VLSD +KK RYDSGVD+ED+DN    G
Sbjct:   56 LMLHKFQEAIGDASRAIAMEPSFIRGYERKAKAQVALGDLEAAVKTYQSGLMKDPNNATLINDRRSAEMAMDKIKRGREHIKAGK--------------------FREGVYCFDSALTICTSSNDVKKWRAEALIGCERYDEAFAVLTQLMRSDSSSPDILFLRAQCLYFQGEFTSAIRHLQEALRADPDNSRFVKEIKRIRSLDTQKEAANDAFKGGRYQEAVDAYSACLAIDPTNKSYNAKLHCNRAAALAKLDKNAEAIRDCDKAIYFDSSYVKAYLRKAQCLKDVGGKDNLEQALREYETASKLVGEDQQRQYAQYIRDTKLLIKKAKRKDYYKILDIGQNAGEADIKKAYRKSALKYHPDRHANKTEEEQKQAEIDFKDVGEAYAVLSDPQKKQRYDSGVDLEDMDNDMGGG 452

[Close]

BLAST of NO01G04680 vs. NCBI_GenBank
Match: XP_008879933.1 (hypothetical protein H310_14005 [Aphanomyces invadans] >ETV91481.1 hypothetical protein H310_14005 [Aphanomyces invadans])

HSP 1 Score: 322.4 bits (825), Expect = 2.300e-84
Identity = 170/408 (41.67%), Postives = 264/408 (64.71%), Query Frame = 0

Query:    1 MMILAYESAIEDCDKAIALSPGMVKAYFRKGKALAILGKFDESIAAYRAGLQQDPNNAQGHSEKTEVETAVKALNKARDILQEARPSPNGGNGSSSSNAIARKRLFLQANTLLDVCLALAPSSFDAKLLKLECQVGLGQYDDAFNSSNHLLRLAPSLAPLLHLRATCLYRLGNLENSIKHSQQAVRSDPDNASYVALLKQVRSLDNKKKEGDTAFTHGQYQKAIQAWTEALAVDPTHKQICAKLYNNRATAYAKMRRHADAVSDCKQALALDPQYLKALKRKAESLFVLGGEENLEQCLRDYETAAGLAPEEEEREYARKMHQAKVALKRAKRKDYYRLLGLSSDATEDEIRKAYRKLALKHHPDRHTSSSEEEKAKAEKEFKNVAEAYEVLSDKEKKARYDSGVDIE 409
            +M+  Y+ AI D  +AIA+ P  ++ Y RK KA   LG+ + ++  Y+AGL +DPNNA   +E+   E A+  + + R+ ++ ++                    F +A    D  L    +S + K L+ E  +G  +YD+AF     L+R   S   +L+LRA CLY  G   ++I+H Q+A+R+DPDNA +V  +K++R+LD +K+  + AF  G+YQ+A++A+T  L++DP +K   AKL+ NRA A AK+ ++ +A+ DC +A+  D  Y+KA  RKA+ L  LGG++NLEQ LR+YETA+ L  E+++R+YA+ + + K+ +K+AKRKDYY++L +   A++ +I+KAYRK ALK HPDRH + ++EEK +AE +FK+V EAY VLSD +KK RYDSGVD+E
Sbjct:   56 LMLHKYQEAIGDASRAIAMEPSFIRGYERKAKAQVALGELEAAVKTYQAGLMKDPNNATLINERRSAEMAMDKIKRGREHIKASK--------------------FREAVYCFDSVLTTCTNSNEVKKLRAEALIGCERYDEAFAVLTQLMRSESSSPDILYLRAQCLYFQGEFTSAIRHLQEALRADPDNARFVKEIKRIRALDTQKEAANDAFKGGRYQEAVEAYTACLSIDPANKSYNAKLHCNRAAALAKLDKNDEAIRDCDKAIYYDSSYVKAYLRKAQCLKDLGGKDNLEQALREYETASKLVGEDQQRQYAQYIRETKLLIKKAKRKDYYKILDIGQHASDADIKKAYRKSALKFHPDRHANKTDEEKKQAEIDFKDVGEAYAVLSDPQKKQRYDSGVDLE 443

[Close]

BLAST of NO01G04680 vs. NCBI_GenBank
Match: CCA17911.1 (ion channel putative [Albugo laibachii Nc14])

HSP 1 Score: 318.2 bits (814), Expect = 4.300e-83
Identity = 184/437 (42.11%), Postives = 262/437 (59.95%), Query Frame = 0

Query:    2 MILAYESAIEDCDKAIALSPGMVKAYFRKGKALAILGKFDESIAAYRAGLQQDPNNAQGHSEKTEVETAVKALNKARDILQEARPSPNGGNGSSSSNAIARKRLFLQANTLLDVCLALAPSSFDAKLLKLECQVGLGQYDDAFNSSNHLLRLAPSLAPLLHLRATCLYRLGNLENSIKHSQQAVRSDPDNASYVALLKQVRSLDNKKKEGDTAFTHGQYQKAIQAWTEALAVDPTHKQICAKLYNNRATAYAKMRRHADAVSDCKQALALDPQYLKALKRKAESLFVLGGEENLEQCLRDYETAAGLAPEEEEREYARKMHQAKVALKRAKRKDYYRLLGLSSDATEDEIRKAYRKLALKHHPDRHTSSSEEEKAKAEKEFKNVAEAYEVLSDKEKKARYDSGVDIEDLDNPHAHGPSRGGGFGGMGGGGIDPNILF 439
            M+  ++ AI DC++AI       K Y RK KA   LG  + +   ++ GL + PNNA  HSEK ++E A + +N+  + L+ AR                    + QA   LD  L +   S D K+ + E  +G  +YD+AF S   L+R   S + +L+LRA CLY  G   N++KH QQA+RSDPDN +++  +K++R L++ K+  + AF  G+   AI  +T+ L +D  +K   AK+Y NRATA +++ R+ +A+ DC +A+  D  Y KA  RKA  L  LG EE LEQ LR YE A+ L     +R+  + + + K+ LK+AKRKDYY++LG++  A E EI+KAYRK ALK+HPDRH S S+ EK +AE  FKN+ EAY VLSD +KK RYD+GVD+EDLDN +A     GGG      GG+DP  +F
Sbjct: 1581 MLDDHKEAIADCNRAILFDSTFSKGYVRKAKAQIALGDIEGANKTFQTGLTKCPNNAALHSEKQQLEVAKEKMNRGLEHLKAAR--------------------YGQAVLCLDGALQILRCSTDLKMKRAEALIGCERYDEAFASLTQLMRANTSSSDILYLRARCLYFQGEFTNAVKHLQQALRSDPDNQTFMKEMKKIRKLESSKENANAAFKAGRMNDAIDQYTKCLGIDQQNKAFNAKIYCNRATALSQINRYEEAIRDCDKAIYYDHGYAKAYLRKAACLKALGTEEKLEQALRVYEQASKLVGNGAQRDIQQNIRETKLELKKAKRKDYYKILGVTQSANEHEIKKAYRKSALKYHPDRHASKSDTEKKEAEVAFKNLGEAYAVLSDPQKKQRYDAGVDLEDLDNEYA---QPGGGM-----GGVDPQQIF 1989

[Close]

BLAST of NO01G04680 vs. NCBI_GenBank
Match: CCA17912.1 (ion channel putative [Albugo laibachii Nc14])

HSP 1 Score: 318.2 bits (814), Expect = 4.300e-83
Identity = 184/437 (42.11%), Postives = 262/437 (59.95%), Query Frame = 0

Query:    2 MILAYESAIEDCDKAIALSPGMVKAYFRKGKALAILGKFDESIAAYRAGLQQDPNNAQGHSEKTEVETAVKALNKARDILQEARPSPNGGNGSSSSNAIARKRLFLQANTLLDVCLALAPSSFDAKLLKLECQVGLGQYDDAFNSSNHLLRLAPSLAPLLHLRATCLYRLGNLENSIKHSQQAVRSDPDNASYVALLKQVRSLDNKKKEGDTAFTHGQYQKAIQAWTEALAVDPTHKQICAKLYNNRATAYAKMRRHADAVSDCKQALALDPQYLKALKRKAESLFVLGGEENLEQCLRDYETAAGLAPEEEEREYARKMHQAKVALKRAKRKDYYRLLGLSSDATEDEIRKAYRKLALKHHPDRHTSSSEEEKAKAEKEFKNVAEAYEVLSDKEKKARYDSGVDIEDLDNPHAHGPSRGGGFGGMGGGGIDPNILF 439
            M+  ++ AI DC++AI       K Y RK KA   LG  + +   ++ GL + PNNA  HSEK ++E A + +N+  + L+ AR                    + QA   LD  L +   S D K+ + E  +G  +YD+AF S   L+R   S + +L+LRA CLY  G   N++KH QQA+RSDPDN +++  +K++R L++ K+  + AF  G+   AI  +T+ L +D  +K   AK+Y NRATA +++ R+ +A+ DC +A+  D  Y KA  RKA  L  LG EE LEQ LR YE A+ L     +R+  + + + K+ LK+AKRKDYY++LG++  A E EI+KAYRK ALK+HPDRH S S+ EK +AE  FKN+ EAY VLSD +KK RYD+GVD+EDLDN +A     GGG      GG+DP  +F
Sbjct: 1605 MLDDHKEAIADCNRAILFDSTFSKGYVRKAKAQIALGDIEGANKTFQTGLTKCPNNAALHSEKQQLEVAKEKMNRGLEHLKAAR--------------------YGQAVLCLDGALQILRCSTDLKMKRAEALIGCERYDEAFASLTQLMRANTSSSDILYLRARCLYFQGEFTNAVKHLQQALRSDPDNQTFMKEMKKIRKLESSKENANAAFKAGRMNDAIDQYTKCLGIDQQNKAFNAKIYCNRATALSQINRYEEAIRDCDKAIYYDHGYAKAYLRKAACLKALGTEEKLEQALRVYEQASKLVGNGAQRDIQQNIRETKLELKKAKRKDYYKILGVTQSANEHEIKKAYRKSALKYHPDRHASKSDTEKKEAEVAFKNLGEAYAVLSDPQKKQRYDAGVDLEDLDNEYA---QPGGGM-----GGVDPQQIF 2013

[Close]

BLAST of NO01G04680 vs. NCBI_GenBank
Match: CCA17913.1 (ion channel putative [Albugo laibachii Nc14])

HSP 1 Score: 318.2 bits (814), Expect = 4.300e-83
Identity = 184/437 (42.11%), Postives = 262/437 (59.95%), Query Frame = 0

Query:    2 MILAYESAIEDCDKAIALSPGMVKAYFRKGKALAILGKFDESIAAYRAGLQQDPNNAQGHSEKTEVETAVKALNKARDILQEARPSPNGGNGSSSSNAIARKRLFLQANTLLDVCLALAPSSFDAKLLKLECQVGLGQYDDAFNSSNHLLRLAPSLAPLLHLRATCLYRLGNLENSIKHSQQAVRSDPDNASYVALLKQVRSLDNKKKEGDTAFTHGQYQKAIQAWTEALAVDPTHKQICAKLYNNRATAYAKMRRHADAVSDCKQALALDPQYLKALKRKAESLFVLGGEENLEQCLRDYETAAGLAPEEEEREYARKMHQAKVALKRAKRKDYYRLLGLSSDATEDEIRKAYRKLALKHHPDRHTSSSEEEKAKAEKEFKNVAEAYEVLSDKEKKARYDSGVDIEDLDNPHAHGPSRGGGFGGMGGGGIDPNILF 439
            M+  ++ AI DC++AI       K Y RK KA   LG  + +   ++ GL + PNNA  HSEK ++E A + +N+  + L+ AR                    + QA   LD  L +   S D K+ + E  +G  +YD+AF S   L+R   S + +L+LRA CLY  G   N++KH QQA+RSDPDN +++  +K++R L++ K+  + AF  G+   AI  +T+ L +D  +K   AK+Y NRATA +++ R+ +A+ DC +A+  D  Y KA  RKA  L  LG EE LEQ LR YE A+ L     +R+  + + + K+ LK+AKRKDYY++LG++  A E EI+KAYRK ALK+HPDRH S S+ EK +AE  FKN+ EAY VLSD +KK RYD+GVD+EDLDN +A     GGG      GG+DP  +F
Sbjct: 1605 MLDDHKEAIADCNRAILFDSTFSKGYVRKAKAQIALGDIEGANKTFQTGLTKCPNNAALHSEKQQLEVAKEKMNRGLEHLKAAR--------------------YGQAVLCLDGALQILRCSTDLKMKRAEALIGCERYDEAFASLTQLMRANTSSSDILYLRARCLYFQGEFTNAVKHLQQALRSDPDNQTFMKEMKKIRKLESSKENANAAFKAGRMNDAIDQYTKCLGIDQQNKAFNAKIYCNRATALSQINRYEEAIRDCDKAIYYDHGYAKAYLRKAACLKALGTEEKLEQALRVYEQASKLVGNGAQRDIQQNIRETKLELKKAKRKDYYKILGVTQSANEHEIKKAYRKSALKYHPDRHASKSDTEKKEAEVAFKNLGEAYAVLSDPQKKQRYDAGVDLEDLDNEYA---QPGGGM-----GGVDPQQIF 2013

[Close]

BLAST of NO01G04680 vs. NCBI_GenBank
Match: CCA17914.1 (ion channel putative [Albugo laibachii Nc14])

HSP 1 Score: 318.2 bits (814), Expect = 4.300e-83
Identity = 184/437 (42.11%), Postives = 262/437 (59.95%), Query Frame = 0

Query:    2 MILAYESAIEDCDKAIALSPGMVKAYFRKGKALAILGKFDESIAAYRAGLQQDPNNAQGHSEKTEVETAVKALNKARDILQEARPSPNGGNGSSSSNAIARKRLFLQANTLLDVCLALAPSSFDAKLLKLECQVGLGQYDDAFNSSNHLLRLAPSLAPLLHLRATCLYRLGNLENSIKHSQQAVRSDPDNASYVALLKQVRSLDNKKKEGDTAFTHGQYQKAIQAWTEALAVDPTHKQICAKLYNNRATAYAKMRRHADAVSDCKQALALDPQYLKALKRKAESLFVLGGEENLEQCLRDYETAAGLAPEEEEREYARKMHQAKVALKRAKRKDYYRLLGLSSDATEDEIRKAYRKLALKHHPDRHTSSSEEEKAKAEKEFKNVAEAYEVLSDKEKKARYDSGVDIEDLDNPHAHGPSRGGGFGGMGGGGIDPNILF 439
            M+  ++ AI DC++AI       K Y RK KA   LG  + +   ++ GL + PNNA  HSEK ++E A + +N+  + L+ AR                    + QA   LD  L +   S D K+ + E  +G  +YD+AF S   L+R   S + +L+LRA CLY  G   N++KH QQA+RSDPDN +++  +K++R L++ K+  + AF  G+   AI  +T+ L +D  +K   AK+Y NRATA +++ R+ +A+ DC +A+  D  Y KA  RKA  L  LG EE LEQ LR YE A+ L     +R+  + + + K+ LK+AKRKDYY++LG++  A E EI+KAYRK ALK+HPDRH S S+ EK +AE  FKN+ EAY VLSD +KK RYD+GVD+EDLDN +A     GGG      GG+DP  +F
Sbjct: 1584 MLDDHKEAIADCNRAILFDSTFSKGYVRKAKAQIALGDIEGANKTFQTGLTKCPNNAALHSEKQQLEVAKEKMNRGLEHLKAAR--------------------YGQAVLCLDGALQILRCSTDLKMKRAEALIGCERYDEAFASLTQLMRANTSSSDILYLRARCLYFQGEFTNAVKHLQQALRSDPDNQTFMKEMKKIRKLESSKENANAAFKAGRMNDAIDQYTKCLGIDQQNKAFNAKIYCNRATALSQINRYEEAIRDCDKAIYYDHGYAKAYLRKAACLKALGTEEKLEQALRVYEQASKLVGNGAQRDIQQNIRETKLELKKAKRKDYYKILGVTQSANEHEIKKAYRKSALKYHPDRHASKSDTEKKEAEVAFKNLGEAYAVLSDPQKKQRYDAGVDLEDLDNEYA---QPGGGM-----GGVDPQQIF 1992

[Close]

BLAST of NO01G04680 vs. NCBI_GenBank
Match: CCA17915.1 (ion channel putative [Albugo laibachii Nc14])

HSP 1 Score: 318.2 bits (814), Expect = 4.300e-83
Identity = 184/437 (42.11%), Postives = 262/437 (59.95%), Query Frame = 0

Query:    2 MILAYESAIEDCDKAIALSPGMVKAYFRKGKALAILGKFDESIAAYRAGLQQDPNNAQGHSEKTEVETAVKALNKARDILQEARPSPNGGNGSSSSNAIARKRLFLQANTLLDVCLALAPSSFDAKLLKLECQVGLGQYDDAFNSSNHLLRLAPSLAPLLHLRATCLYRLGNLENSIKHSQQAVRSDPDNASYVALLKQVRSLDNKKKEGDTAFTHGQYQKAIQAWTEALAVDPTHKQICAKLYNNRATAYAKMRRHADAVSDCKQALALDPQYLKALKRKAESLFVLGGEENLEQCLRDYETAAGLAPEEEEREYARKMHQAKVALKRAKRKDYYRLLGLSSDATEDEIRKAYRKLALKHHPDRHTSSSEEEKAKAEKEFKNVAEAYEVLSDKEKKARYDSGVDIEDLDNPHAHGPSRGGGFGGMGGGGIDPNILF 439
            M+  ++ AI DC++AI       K Y RK KA   LG  + +   ++ GL + PNNA  HSEK ++E A + +N+  + L+ AR                    + QA   LD  L +   S D K+ + E  +G  +YD+AF S   L+R   S + +L+LRA CLY  G   N++KH QQA+RSDPDN +++  +K++R L++ K+  + AF  G+   AI  +T+ L +D  +K   AK+Y NRATA +++ R+ +A+ DC +A+  D  Y KA  RKA  L  LG EE LEQ LR YE A+ L     +R+  + + + K+ LK+AKRKDYY++LG++  A E EI+KAYRK ALK+HPDRH S S+ EK +AE  FKN+ EAY VLSD +KK RYD+GVD+EDLDN +A     GGG      GG+DP  +F
Sbjct: 1584 MLDDHKEAIADCNRAILFDSTFSKGYVRKAKAQIALGDIEGANKTFQTGLTKCPNNAALHSEKQQLEVAKEKMNRGLEHLKAAR--------------------YGQAVLCLDGALQILRCSTDLKMKRAEALIGCERYDEAFASLTQLMRANTSSSDILYLRARCLYFQGEFTNAVKHLQQALRSDPDNQTFMKEMKKIRKLESSKENANAAFKAGRMNDAIDQYTKCLGIDQQNKAFNAKIYCNRATALSQINRYEEAIRDCDKAIYYDHGYAKAYLRKAACLKALGTEEKLEQALRVYEQASKLVGNGAQRDIQQNIRETKLELKKAKRKDYYKILGVTQSANEHEIKKAYRKSALKYHPDRHASKSDTEKKEAEVAFKNLGEAYAVLSDPQKKQRYDAGVDLEDLDNEYA---QPGGGM-----GGVDPQQIF 1992

[Close]

BLAST of NO01G04680 vs. NCBI_GenBank
Match: CCA17916.1 (ion channel putative [Albugo laibachii Nc14])

HSP 1 Score: 318.2 bits (814), Expect = 4.300e-83
Identity = 184/437 (42.11%), Postives = 262/437 (59.95%), Query Frame = 0

Query:    2 MILAYESAIEDCDKAIALSPGMVKAYFRKGKALAILGKFDESIAAYRAGLQQDPNNAQGHSEKTEVETAVKALNKARDILQEARPSPNGGNGSSSSNAIARKRLFLQANTLLDVCLALAPSSFDAKLLKLECQVGLGQYDDAFNSSNHLLRLAPSLAPLLHLRATCLYRLGNLENSIKHSQQAVRSDPDNASYVALLKQVRSLDNKKKEGDTAFTHGQYQKAIQAWTEALAVDPTHKQICAKLYNNRATAYAKMRRHADAVSDCKQALALDPQYLKALKRKAESLFVLGGEENLEQCLRDYETAAGLAPEEEEREYARKMHQAKVALKRAKRKDYYRLLGLSSDATEDEIRKAYRKLALKHHPDRHTSSSEEEKAKAEKEFKNVAEAYEVLSDKEKKARYDSGVDIEDLDNPHAHGPSRGGGFGGMGGGGIDPNILF 439
            M+  ++ AI DC++AI       K Y RK KA   LG  + +   ++ GL + PNNA  HSEK ++E A + +N+  + L+ AR                    + QA   LD  L +   S D K+ + E  +G  +YD+AF S   L+R   S + +L+LRA CLY  G   N++KH QQA+RSDPDN +++  +K++R L++ K+  + AF  G+   AI  +T+ L +D  +K   AK+Y NRATA +++ R+ +A+ DC +A+  D  Y KA  RKA  L  LG EE LEQ LR YE A+ L     +R+  + + + K+ LK+AKRKDYY++LG++  A E EI+KAYRK ALK+HPDRH S S+ EK +AE  FKN+ EAY VLSD +KK RYD+GVD+EDLDN +A     GGG      GG+DP  +F
Sbjct: 1583 MLDDHKEAIADCNRAILFDSTFSKGYVRKAKAQIALGDIEGANKTFQTGLTKCPNNAALHSEKQQLEVAKEKMNRGLEHLKAAR--------------------YGQAVLCLDGALQILRCSTDLKMKRAEALIGCERYDEAFASLTQLMRANTSSSDILYLRARCLYFQGEFTNAVKHLQQALRSDPDNQTFMKEMKKIRKLESSKENANAAFKAGRMNDAIDQYTKCLGIDQQNKAFNAKIYCNRATALSQINRYEEAIRDCDKAIYYDHGYAKAYLRKAACLKALGTEEKLEQALRVYEQASKLVGNGAQRDIQQNIRETKLELKKAKRKDYYKILGVTQSANEHEIKKAYRKSALKYHPDRHASKSDTEKKEAEVAFKNLGEAYAVLSDPQKKQRYDAGVDLEDLDNEYA---QPGGGM-----GGVDPQQIF 1991

The following BLAST results are available for this feature:

BLAST of NO01G04680 vs. NCBI_GenBank

BLAST of NO01G04680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM29408.1	1.000e-140	71.39	ion channel [Nannochloropsis gaditana]	[more]
CBJ26057.1	1.700e-103	47.39	Heat shock protein 40 like protein [Ectocarpus sil...	[more]
XP_009825970.1	9.300e-86	41.49	hypothetical protein H257_03532 [Aphanomyces astac...	[more]
XP_008879933.1	2.300e-84	41.67	hypothetical protein H310_14005 [Aphanomyces invad...	[more]
CCA17911.1	4.300e-83	42.11	ion channel putative [Albugo laibachii Nc14]	[more]
CCA17912.1	4.300e-83	42.11	ion channel putative [Albugo laibachii Nc14]	[more]
CCA17913.1	4.300e-83	42.11	ion channel putative [Albugo laibachii Nc14]	[more]
CCA17914.1	4.300e-83	42.11	ion channel putative [Albugo laibachii Nc14]	[more]
CCA17915.1	4.300e-83	42.11	ion channel putative [Albugo laibachii Nc14]	[more]
CCA17916.1	4.300e-83	42.11	ion channel putative [Albugo laibachii Nc14]	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL005	nonsL005	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR047	ncniR047	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR091	ngnoR091	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK007803	NSK007803	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO01G04680.1	NO01G04680.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide
NO01G04680.2	NO01G04680.2-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|537646	gene_491	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100042g13	gene1232	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO01G04680.1	NO01G04680.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA
NO01G04680.2	NO01G04680.2	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence
protein sequence

gene sequence

>NO01G04680 ID=NO01G04680|Name=NO01G04680|organism=Nannochloropsis oceanica|type=gene|length=2352bp
TAAGAGATGATGAGAGATGATGTGATGACGGCCCCGGCTGGTGGCTTTAG
GCCTAGCATTACCATCTGTGTCGGGCGACGCTCTCCTGGCCACGACTCGG
TGCCTCTTTTCCTTGTCTTGGCGGCGACTGTCCGCTTCTATTTTCCTCCT
GAAAGCCAGTTGCTCACAGCCGCCCCGTCTTCTTCCCCTTCTTCTTTCGC
CGTTCCCGTGCCTGACACTATTCACCATCGATAGACAGCCAAGCCTAGGT
GACGCACACCCGCTCTGCCCTGATGGGGGAGGAAGAACCTGTCTTGGTCA
AGACGGCCGTGCACTGGTAAGTCAATCATATCCATTTCTTCAGACTTTTT
GATAGCCTCCCCACACCTCCATGCGTTGTCGAACTTCGTATATTATGATG
GCTGCGGCCTCCACCATGCATGCCCATGTTGCACACGAAGATTATAGCGT
AGAACCAGAAAAGTACCTGGATATGGTGCACCTTTCTGTGATTTTGCTCT
TGCCTTTTTGGCTCTTTTTTGCCGGCAAGTCCCGCCTCGCTCCTTCTCCG
CCACACGCCCGCTCCCACTGACCACGCGTATGTCTATCCCCAACACACAC
TCTGTCTCTGTCCGAAACGCCATAAATCCAACTCCCCTGCCTACTCCCTG
TATTGTTTTACAGCAGCTCGCTCTTAAGACATCTCCTTGTCTCCTTCTCA
TCCTTACCTCCCTGCCTTCTACTAAAACGCTCACCTCACAGGAAAGACGA
AGGTAACGAGTTTTACAAAAAAGGCGACTATCGGGCTGCCATCGACGCCT
ATAGCCTGGCCATCGCCGAGGCTCCCGATGAGCCCTCATTCTACGGAAAC
CGAGCTGCGGCGCACATGATGATCTTGGCCTATGAAAGCGCCATCGAGGA
CTGTGATAAAGCGATTGCATTGAGTCCAGGGATGGTCAAGGCGTACTTTC
GGAAGGGCAAAGCGTTGGCGATATTAGgtaagtagataaggtaggaatta
cgatatgagggggaacaaaaagtgatgcaatgctcacgagcactcatctc
catgacctctccctcccttccttccaagGCAAATTCGACGAAAGCATAGC
TGCCTACCGCGCGGGGCTCCAACAAGATCCGAACAACGCGCAGGGCCACT
CCGAGAAAACCGAGGTGGAAACAGCCGTCAAAGCCCTGAACAAAGCACGT
GACATACTTCAAGAGGCCCGACCGTCGCCCAATGGGGGAAATGGCAGCAG
CAGCAGCAACGCGATCGCGAGGAAACGCCTCTTTCTGCAAGCGAACACCC
TGCTGGACGTATGTCTCGCCCTCGCGCCTTCCTCCTTTGATGCCAAGCTC
CTCAAGCTCGAATGTCAAGTGGGCCTTGGCCAGTACGACGACGCCTTCAA
CAGCAGCAACCACCTGCTCCGCCTCGCCCCCTCCCTGGCCCCTCTCCTGC
ACCTCCGGGCCACATGCCTCTACCGACTAGGCAACCTCGAAAACTCTATC
AAGCATTCCCAACAAGCCGTCCGCTCCGACCCGGATAATGCCTCCTACGT
GGCACTCCTTAAACAAGTGCGCTCGTTAGACAACAAAAAAAAAGAAGGCG
ACACCGCTTTCACGCACGGCCAGTACCAAAAAGCGATTCAGGCATGGACG
GAGGCCCTTGCCGTAGACCCAACGCACAAGCAAATATGTGCCAAGCTGTA
CAATAACCGTGCCACCGCCTACGCTAAGATGCGAAGACACGCCGATGCCG
TCTCGGACTGCAAGCAGGCTTTGGCTCTGGATCCGCAATACCTTAAAGCC
CTCAAAAGAAAAGCCGAGAGCCTGTTTGTTCTGGGGGGGGAGGAGAATTT
GGAGCAGTGCTTACGTGACTACGAGACAGCGGCGGGGTTGGCGCCCGAGG
AGGAGGAGAGAGAATATGCGCGGAAGATGCACCAGGCCAAGGTGGCGCTG
AAGAGGGCAAAGAGGAAAGATTACTATCGCTTGCTAGGACTGTCCTCGGA
TGCGACGGAGGACGAGATCAGGAAGGCTTATAGGAAGTTGGCGTTGAAGC
ACCATCCGGACAGGCATACGAGCAGCAGCGAGGAGGAGAAGGCGAAGGCG
GAGAAGGAGTTCAAGAACGTGGCCGAGGCGTATGAGGTGTTGAGCGACAA
GGAGAAGAAGGCACGGTATGACAGTGGAGTGGACATCGAAGACTTGGATA
ACCCGCACGCGCATGGGCCGTCGCGCGGAGGGGGCTTCGGGGGGATGGGG
GGAGGGGGCATTGATCCGAATATTTTATTTCAAATGTTCATGCAGCAGCA
GGCAGGGGCGGGAGGAGGGTTTGGAGGGAGAGGGAGGGGAGGTCCTTTTT
AG

protein sequence of NO01G04680.1

>NO01G04680.1-protein ID=NO01G04680.1-protein|Name=NO01G04680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=462bp
MMILAYESAIEDCDKAIALSPGMVKAYFRKGKALAILGKFDESIAAYRAG
LQQDPNNAQGHSEKTEVETAVKALNKARDILQEARPSPNGGNGSSSSNAI
ARKRLFLQANTLLDVCLALAPSSFDAKLLKLECQVGLGQYDDAFNSSNHL
LRLAPSLAPLLHLRATCLYRLGNLENSIKHSQQAVRSDPDNASYVALLKQ
VRSLDNKKKEGDTAFTHGQYQKAIQAWTEALAVDPTHKQICAKLYNNRAT
AYAKMRRHADAVSDCKQALALDPQYLKALKRKAESLFVLGGEENLEQCLR
DYETAAGLAPEEEEREYARKMHQAKVALKRAKRKDYYRLLGLSSDATEDE
IRKAYRKLALKHHPDRHTSSSEEEKAKAEKEFKNVAEAYEVLSDKEKKAR
YDSGVDIEDLDNPHAHGPSRGGGFGGMGGGGIDPNILFQMFMQQQAGAGG
GFGGRGRGGPF*

protein sequence of NO01G04680.2

>NO01G04680.2-protein ID=NO01G04680.2-protein|Name=NO01G04680.2|organism=Nannochloropsis oceanica|type=polypeptide|length=518bp
MGEEEPVLVKTAVHWKDEGNEFYKKGDYRAAIDAYSLAIAEAPDEPSFYG
NRAAAHMMILAYESAIEDCDKAIALSPGMVKAYFRKGKALAILGKFDESI
AAYRAGLQQDPNNAQGHSEKTEVETAVKALNKARDILQEARPSPNGGNGS
SSSNAIARKRLFLQANTLLDVCLALAPSSFDAKLLKLECQVGLGQYDDAF
NSSNHLLRLAPSLAPLLHLRATCLYRLGNLENSIKHSQQAVRSDPDNASY
VALLKQVRSLDNKKKEGDTAFTHGQYQKAIQAWTEALAVDPTHKQICAKL
YNNRATAYAKMRRHADAVSDCKQALALDPQYLKALKRKAESLFVLGGEEN
LEQCLRDYETAAGLAPEEEEREYARKMHQAKVALKRAKRKDYYRLLGLSS
DATEDEIRKAYRKLALKHHPDRHTSSSEEEKAKAEKEFKNVAEAYEVLSD
KEKKARYDSGVDIEDLDNPHAHGPSRGGGFGGMGGGGIDPNILFQMFMQQ
QAGAGGGFGGRGRGGPF*

Synonyms

Publications