jgi.p|Nanoce1779_2|537646, gene_491 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|537646
Unique Namegene_491
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_3:1187241..1190119 +

Link to JBrowse

Properties
Property NameValue
TranscriptId537732
ProteinId537646
Product nameheat shock protein 40 like protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_3supercontigscaffold_3:1187241..1190119 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0031072heat shock protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL047ncniL047Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G04680NO01G04680Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|537646mRNA_491-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|537646mRNA_491Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|537646

>mRNA_491-protein ID=mRNA_491-protein|Name=jgi.p|Nanoce1779_2|537646|organism=Nannochloropsis oceanica|type=polypeptide|length=502bp
MGEEEPVLVKTAVHWKDEGNEFYKKGDYRAAIDAYSLAIAEAPDEPSFYG
NRAAAHMMILAYESAIEDCDKAIALSPGMVKAYFRKGKALAILGKFDESI
AAYRAGLQQDPNNAQGHSEKTEVETAVKALNKARDILQEARPKRLFLQAN
TLLDVCLALAPSSFDAKLLKLECQVGLGQYDDAFNSSNHLLRLAPSLAPL
LHLRATCLYRLGNLENSIKHSQQAVRSDPDNASYVALLKQVRSLDNKKKE
GDTAFTHGQYQKAIQAWTEALAVDPTHKQICAKLYNNRATAYAKMRRHAD
AVSDCKQALALDPQYLKALKRKAESLFVLGGEENLEQCLRDYETAAGLAP
EEEEREYARKMHQAKVALKRAKRKDYYRLLGLSSDATEDEIRKAYRKLAL
KHHPDRHTSSSEEEKAKAEKEFKNVAEAYEVLSDKEKKARYDSGVDIEDL
DNPHAHGPSRGGGFGGMGGGGIDPNILFQMFMQQQAGAGGGFGGRGRGGP
F*
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Synonyms
Publications