NO01G03790, NO01G03790 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G03790 vs. NCBI_GenBank
Match: ETP50223.1 (hypothetical protein F442_04391 [Phytophthora parasitica P10297]) HSP 1 Score: 164.5 bits (415), Expect = 6.300e-37 Identity = 92/180 (51.11%), Postives = 121/180 (67.22%), Query Frame = 0 Query: 18 QREVANLLAQQKDEKAAIKVEAIIREDATIEAYGILELVCDLLHERARLVASEKECPEDLKSAVVTLIWATNRADIMELHEVKKQFAKKFGKEFVERAEKDEDRLVNERVAHKLSIRPPSAAIVEKYLREIALKNDVEWTPLEHPCDLTEDQKAFSSMPAPTGASVGMGPASG--FGHLY 196 +REV LLA K+EKA I+VE IIR+D T+E Y ILEL+C+LL ERA L+ +E +CP D++ AV TLIWA +R +I EL EVKKQ KK+G++F A ++ D VNERV KLS++PPSA +V Y++EIA + V+W P D E + +PAPTGA+V G SG F LY Sbjct: 82 RREVGRLLADGKEEKARIRVEGIIRDDFTMEGYEILELLCELLAERANLIKTEADCPYDMREAVCTLIWAASRTEIPELAEVKKQLTKKYGQDFEAAAIRNVDGCVNERVIQKLSVQPPSAFLVVNYMKEIAKEFKVDWEP-----DEAEVTDPLAPIPAPTGATVTSGAVSGPEFAALY 256
BLAST of NO01G03790 vs. NCBI_GenBank
Match: KUF89655.1 (hypothetical protein AM588_10002494 [Phytophthora nicotianae]) HSP 1 Score: 164.5 bits (415), Expect = 6.300e-37 Identity = 92/180 (51.11%), Postives = 121/180 (67.22%), Query Frame = 0 Query: 18 QREVANLLAQQKDEKAAIKVEAIIREDATIEAYGILELVCDLLHERARLVASEKECPEDLKSAVVTLIWATNRADIMELHEVKKQFAKKFGKEFVERAEKDEDRLVNERVAHKLSIRPPSAAIVEKYLREIALKNDVEWTPLEHPCDLTEDQKAFSSMPAPTGASVGMGPASG--FGHLY 196 +REV LLA K+EKA I+VE IIR+D T+E Y ILEL+C+LL ERA L+ +E +CP D++ AV TLIWA +R +I EL EVKKQ KK+G++F A ++ D VNERV KLS++PPSA +V Y++EIA + V+W P D E + +PAPTGA+V G SG F LY Sbjct: 35 RREVGRLLADGKEEKARIRVEGIIRDDFTMEGYEILELLCELLAERANLIKTEADCPYDMREAVCTLIWAASRTEIPELAEVKKQLTKKYGQDFEAAAIRNVDGCVNERVIQKLSVQPPSAFLVVNYMKEIAKEFKVDWEP-----DEAEVTDPLAPIPAPTGATVTSGAVSGPEFAALY 209
BLAST of NO01G03790 vs. NCBI_GenBank
Match: GAX95034.1 (Hypothetical protein PINS_002913 [Pythium insidiosum]) HSP 1 Score: 162.9 bits (411), Expect = 1.800e-36 Identity = 89/174 (51.15%), Postives = 117/174 (67.24%), Query Frame = 0 Query: 17 AQREVANLLAQQKDEKAAIKVEAIIREDATIEAYGILELVCDLLHERARLVASEKECPEDLKSAVVTLIWATNRADIMELHEVKKQFAKKFGKEFVERAEKDEDRLVNERVAHKLSIRPPSAAIVEKYLREIALKNDVEWTPLEHPCDLTEDQKAFSSMPAPTGASVGMGPASG 191 A+RE+A+LLA K+EKA IKVE IIR+D T+E Y I+EL+CDL+ RA LV +E+ECP D++ AV TLIWA NR +I EL EVKKQ KK+G++F A ++ D VNERV KLS++PPSA +V Y++EIA + +V W P D T + APTG +V SG Sbjct: 231 ARREIASLLADGKEEKARIKVEGIIRDDFTMEGYEIIELLCDLVAXRASLVKNERECPYDMREAVCTLIWAANRTEIPELTEVKKQLTKKYGQDFAAAAMRNIDGCVNERVMQKLSVQPPSAYLVVNYMKEIAKQFNVNWEP-----DETAIVDPLAPXXAPTGTTVATASVSG 399
BLAST of NO01G03790 vs. NCBI_GenBank
Match: XP_012194545.1 (hypothetical protein SPRG_00943 [Saprolegnia parasitica CBS 223.65] >KDO34885.1 hypothetical protein SPRG_00943 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 161.8 bits (408), Expect = 4.100e-36 Identity = 78/148 (52.70%), Postives = 112/148 (75.68%), Query Frame = 0 Query: 15 RMAQREVANLLAQQKDEKAAIKVEAIIREDATIEAYGILELVCDLLHERARLVASEKECPEDLKSAVVTLIWATNRADIMELHEVKKQFAKKFGKEFVERAEKDEDRLVNERVAHKLSIRPPSAAIVEKYLREIALKNDVEWTPLEHP 163 ++ ++EVA LLA+ K+EKA I+VE +IRED +EAY ILEL+C+L+ ERA L+ +E+ CP D++ AV TLIWA NR +I EL+EVK Q KK+G++F A ++ D VNERV HKLS++PP++ +V YL+EIA +++V W P+E P Sbjct: 32 KVLRKEVAKLLAEGKEEKARIRVEGLIREDFVVEAYEILELLCELVAERAALIKAERACPYDMREAVYTLIWAANRTEIPELNEVKSQLTKKYGQDFAAAALRNVDGCVNERVIHKLSVQPPNSFLVINYLKEIAKQHNVNWVPIEMP 179
BLAST of NO01G03790 vs. NCBI_GenBank
Match: XP_024576581.1 (Spindle pole body protein [Plasmopara halstedii] >CEG40212.1 Spindle pole body protein [Plasmopara halstedii]) HSP 1 Score: 161.0 bits (406), Expect = 7.000e-36 Identity = 90/180 (50.00%), Postives = 119/180 (66.11%), Query Frame = 0 Query: 18 QREVANLLAQQKDEKAAIKVEAIIREDATIEAYGILELVCDLLHERARLVASEKECPEDLKSAVVTLIWATNRADIMELHEVKKQFAKKFGKEFVERAEKDEDRLVNERVAHKLSIRPPSAAIVEKYLREIALKNDVEWTPLEHPCDLTEDQKAFSSMPAPTGASVGMGPASG--FGHLY 196 +REVA LLA K+EKA I+VE IIR+D TIE Y +LEL+C+LL ERA L+ +E +CP D++ AV TLIW+ +R +I EL EVKKQF KK+G +F A ++ VNERV KLS++PPSA +V Y++EIA + V+W P E P F+ +P PTG +V SG F LY Sbjct: 21 RREVAQLLADGKEEKARIRVEGIIRDDFTIEGYEVLELLCELLAERANLIKTEADCPHDMREAVCTLIWSASRTEIPELAEVKKQFIKKYGHDFEAAAIRNIGGCVNERVVQKLSVQPPSAYLVINYMKEIAKEFKVDWVPEEVP-------DPFAPIPPPTGVTVMKAAVSGPDFAALY 193
BLAST of NO01G03790 vs. NCBI_GenBank
Match: GAX19068.1 (hypothetical protein FisN_8Hh294 [Fistulifera solaris]) HSP 1 Score: 154.1 bits (388), Expect = 8.600e-34 Identity = 85/176 (48.30%), Postives = 121/176 (68.75%), Query Frame = 0 Query: 19 REVANLLAQQ--KDEKAAIKVEAIIREDATIEAYGILELVCDLLHERARLVASEKECPEDLKSAVVTLIWATNRADIMELHEVKKQFAKKFGKEFVERAEKDEDRLVNERVAHKLSIRPPSAAIVEKYLREIALKNDVEWTPLEHPCDLTEDQKAFSSMPAPTGASVGMGPASGFG 193 REVA +LA+ K+EKA I+ EA+IR+D IEAY IL+L C+LL+ER +L+ K+CP DL + V T+IWA++R DI EL ++KQF K+GKEF ERA ++ ++N+RV HKLS+ PP+AA+V+ YL I +++V+W+P LT Q + M AP G SVG+ +G G Sbjct: 38 REVAKMLAEDPPKEEKARIRAEALIRDDYLIEAYEILQLNCELLYERMKLIEYSKDCPNDLVTVVSTIIWASHRVDIPELVLIRKQFKAKYGKEFEERALQNAGNVLNQRVVHKLSVEPPAAALVQIYLERICEQHEVDWSP---KLKLTAAQLS-QPMAAPFGYSVGIAQGTGLG 209
BLAST of NO01G03790 vs. NCBI_GenBank
Match: GBG30848.1 (IST1-like protein [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 153.7 bits (387), Expect = 1.100e-33 Identity = 83/178 (46.63%), Postives = 121/178 (67.98%), Query Frame = 0 Query: 15 RMAQREVANLLAQQKDEKAAIKVEAIIREDATIEAYGILELVCDLLHERARLVASEKECPEDLKSAVVTLIWATNRADIMELHEVKKQFAKKFGKEFVERAEKDEDRLVNERVAHKLSIRPPSAAIVEKYLREIALKNDVEWTPLEHPCDLTEDQKAFSSMPAPTGASVGMGPASGFG 193 + +++ VA LL K EKA I E I+RED IE Y I+EL+C+L+ ER RL+ +EKECP D++ AV TLI+A NR +I EL +V++Q KK+GK+F E+A+++ + VNERV KLS +PP+A +V Y++E+A + DV+W P E ++ + S+M PTGA+V G SG G Sbjct: 37 KKSKKTVAELLRDGKTEKARITTEHIVREDFLIETYDIIELLCELVLERIRLLDAEKECPFDMREAVCTLIYAANRTEIKELIQVREQLTKKYGKDFAEKADRNHNGCVNERVVAKLSAQPPNAFLVLNYMKELADEYDVDWQPDE--ATMSIGARFDSAMAPPTGATVTAGAGSGLG 212
BLAST of NO01G03790 vs. NCBI_GenBank
Match: GAX15410.1 (hypothetical protein FisN_8Lh294 [Fistulifera solaris]) HSP 1 Score: 152.9 bits (385), Expect = 1.900e-33 Identity = 85/176 (48.30%), Postives = 119/176 (67.61%), Query Frame = 0 Query: 19 REVANLLAQQ--KDEKAAIKVEAIIREDATIEAYGILELVCDLLHERARLVASEKECPEDLKSAVVTLIWATNRADIMELHEVKKQFAKKFGKEFVERAEKDEDRLVNERVAHKLSIRPPSAAIVEKYLREIALKNDVEWTPLEHPCDLTEDQKAFSSMPAPTGASVGMGPASGFG 193 REVA +LA+ K+EKA I+ EA+IR+D IEAY IL+L C+LL+ER +L+ +CP DL + V T+IWA++R DI EL ++KQF K+GKEF ERA ++ ++N+RV HKLS+ PP+AA+V+ YL I K+ V+W+P LT Q + M AP G SVG+ +G G Sbjct: 22 REVAKMLAEDPPKEEKARIRAEALIRDDYLIEAYEILQLGCELLYERMKLIDYSSDCPNDLVTVVSTIIWASHRVDIPELVLIRKQFKAKYGKEFEERALQNAGNVLNQRVVHKLSVEPPAAALVQIYLERICEKHQVDWSP---KLKLTAAQLS-QPMAAPLGDSVGIAQGTGLG 193
BLAST of NO01G03790 vs. NCBI_GenBank
Match: CBN80097.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 150.6 bits (379), Expect = 9.500e-33 Identity = 77/144 (53.47%), Postives = 106/144 (73.61%), Query Frame = 0 Query: 15 RMAQREVANLLAQQKDEKAAIKVEAIIREDATIEAYGILELVCDLLHERARLVASEKECPEDLKSAVVTLIWATNRADIMELHEVKKQFAKKFGKEFVERAEKDEDRLVNERVAHKLSIRPPSAAIVEKYLREIALKNDVEWTP 159 +++++E+A LLA K+EKA IKVE +IRED TIEAY +LEL C+L+ ER RLVAS+K+ P D++ AV T+IWA +RA++ EL VK QF KK+G E+V AE +E VN +V KL +PPS+ +V +YL IA + DVE+TP Sbjct: 40 KISKKEIARLLADGKEEKARIKVEQVIREDFTIEAYDVLELHCELVAERMRLVASQKDVPPDMEQAVCTIIWAADRAEVSELSTVKSQFVKKYGSEYVRLAELNEGGCVNPKVVEKLDCQPPSSFVVTEYLLGIAEEYDVEYTP 183
BLAST of NO01G03790 vs. NCBI_GenBank
Match: EJK62081.1 (hypothetical protein THAOC_17322, partial [Thalassiosira oceanica]) HSP 1 Score: 148.3 bits (373), Expect = 4.700e-32 Identity = 86/174 (49.43%), Postives = 119/174 (68.39%), Query Frame = 0 Query: 19 REVANLLAQQ--KDEKAAIKVEAIIREDATIEAYGILELVCDLLHERARLVASEKECPEDLKSAVVTLIWATNRADIMELHEVKKQFAKKFGKEFVERAEKDEDRLVNERVAHKLSIRPPSAAIVEKYLREIALKNDVEWTPLEHPCDLTEDQKAFSSMPAPTGASVGMGPASG 191 R++A LLA+ K+EKA IK E +IR+D +EAY IL+L C+LL ER +L+ KECP DL ++ T+IWA++ DI EL E++KQF KFGK F E A + ++NERVA KLS++PPSA +V+ YL +IA +++V+W P E P L D+ A M AP+G SV +G SG Sbjct: 171 RDIARLLAEDPPKEEKARIKAEGLIRDDYMVEAYEILQLNCELLSERIQLITHMKECPPDLVESISTVIWASSIVDIPELIEIRKQFRYKFGKTFEEEAIMNVGGIINERVAEKLSVQPPSAYLVQTYLEKIADEHEVDWKP-ERP--LKADEIA-EPMSAPSGYSVPVGGGSG 340 The following BLAST results are available for this feature:
BLAST of NO01G03790 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G03790 ID=NO01G03790|Name=NO01G03790|organism=Nannochloropsis oceanica|type=gene|length=1862bpback to top protein sequence of NO01G03790.2 >NO01G03790.2-protein ID=NO01G03790.2-protein|Name=NO01G03790.2|organism=Nannochloropsis oceanica|type=polypeptide|length=366bpback to top protein sequence of NO01G03790.1 >NO01G03790.1-protein ID=NO01G03790.1-protein|Name=NO01G03790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=390bpback to top Synonyms
Publications
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