NO01G01840, NO01G01840 (gene) Nannochloropsis oceanica

Overview
NameNO01G01840
Unique NameNO01G01840
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1224
Alignment locationchr1:466186..467409 -

Link to JBrowse

Properties
Property NameValue
DescriptionPre-mRNA-splicing factor CDC5/CEF1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:466186..467409 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021786DUF3351
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Homology
[Close]
BLAST of NO01G01840 vs. NCBI_GenBank
Match: XP_004334018.1 (Myblike DNA binding protein, putative [Acanthamoeba castellanii str. Neff] >ELR12005.1 Myblike DNA binding protein, putative [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 119.8 bits (299), Expect = 2.000e-23
Identity = 105/371 (28.30%), Postives = 160/371 (43.13%), Query Frame = 0 
Query:    9 TPMRDELGLNQGXXXXXXXXXXXXXXXXXXXXXKMLRAQLAEGLQGLPEPQYNYEISLPELEEDGEGGKEDGMSVEEDAADRDAREAGEKRAKEEAELARRSTVLKRGLPRPIVVDPQVFQSRARATAAAAAEGDEKAAADALVQKELYAMLVHDQAKYPFVHVALGKXXXXXXXXXXXXXXXXXXDLPALPSKLLEQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAWLKAYHDLAYFPNRQTFGRLTGANKQDRLAALIHQFDSLQAQGVKEGKKAGKLEARLNLATGGYGKRASNLVQGVSDVLNQIDEMRLEVGCFRRLAAIEELALRTRLAKVQGEVEGLEGREEQLQVSYVEL 380
            TP+RD L +N+                      + +R QL  GL  LP P   YE+ +PE+E++ E  +   +   EDA  R   EA   RA+EE +L  RS VLKR LPRP+ V      +RA      +A  +E   AD   ++E+  ML+H+  +YP       K                  +L A    L+++                                          W +   +  Y P ++    ++  +  +RLAAL  + D+LQAQ  KE  KA KLE RL +  GGY  RA+ L + + ++   +D+  +E+ CF  L  +EE AL  RLA +  E++ L  RE+ LQ  + +L
Sbjct:  424 TPLRDGLHINE---PIEGDSMALSTPLIEKQRQQAVRQQLRMGLSSLPAPSNKYELLMPEIEDEEEDAEAQMVEDSEDALQRKRDEA---RAQEELKLRLRSQVLKRDLPRPLGV------NRAFLETDDSATDEELRKADEETRREMLLMLIHEAVEYPIKGGEAPK-------AHPPYEQMTEDELTAARKLLMDEV-----------------------AVTTAHNGRVPPEVYARVWEQVSQEYVYVPAKKRALPVSSLSGDERLAALRAKLDALQAQAKKETTKAAKLEKRLAVYNGGYQNRANALHKEILELYMNLDKATVELRCFEALRGMEERALPARLAALDDELDALRAREDALQRQFADL 752
[Close]
BLAST of NO01G01840 vs. NCBI_GenBank
Match: XP_016975377.1 (PREDICTED: cell division cycle 5-like protein [Drosophila rhopaloa])

HSP 1 Score: 119.8 bits (299), Expect = 2.000e-23
Identity = 94/350 (26.86%), Postives = 159/350 (45.43%), Query Frame = 0 
Query:   42 KMLRAQLAEGLQGLPEPQYNYEISLPELEEDGEGGKEDGMSVEEDAADRDAREAGEKRAKEEAELARRSTVLKRGLPRPIVVDPQVFQSRARATAAAAAEGDEKAAADALVQKELYAMLVHDQAKYPFVHVALGK-XXXXXXXXXXXXXXXXXXDLPALPSKLLEQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAWLKAYHDLAYFPNRQTFGRLTGANKQDRLAALIHQFDSLQAQGVKEGKKAGKLEARLNLATGGYGKRASNLVQGVSDVLNQIDEMRLEVGCFRRLAAIEELALRTRLAKVQGEVEGLEGREEQLQVSYVELLDERDGLFALV 391
            K L++ L EGL  LP P+ +YEI +PE +ED E  + +     ED AD DAR   E+ A+ + EL +RS V++R LPRP  V+ ++ + ++           E+  A+ L++ E+  M ++D  K P    +  K                   DL      L E+                                        + W +    + Y P++  + R   A+K+DRL +   + ++ +    KE K+ GK+E +L + TGGY  RA  L++ + D   QI++  + +  FR L   E +A+  RL  +Q +V     RE++LQ  Y  L++ER+ L++ +
Sbjct:  473 KQLKSTLREGLSTLPAPRNDYEIVVPE-QEDSEPMETNTEPAIEDQADVDARLLAEQEARRKRELEKRSQVIQRSLPRPTEVNTKILRPQSEKQNLT-----EQQQAEELIKHEMITMQLYDSVKDPVPGQSQHKLEQLQSYFKANPYEDISQQDLAKAKLMLTEEME---------------------VVKERMSHGELPLDVYAQVWQECLGQVLYLPSQHRYTRANLASKKDRLESAEKRLETNRRHMAKEAKRCGKIEKKLKILTGGYQARAQVLIKQLQDTFGQIEQNSVSLSTFRFLGEQEAIAVPRRLESLQEDVRRQMDREKELQQKYASLVEERESLYSQI 795
[Close]
BLAST of NO01G01840 vs. NCBI_GenBank
Match: XP_017127776.1 (PREDICTED: cell division cycle 5-like protein [Drosophila elegans])

HSP 1 Score: 119.8 bits (299), Expect = 2.000e-23
Identity = 92/349 (26.36%), Postives = 159/349 (45.56%), Query Frame = 0 
Query:   42 KMLRAQLAEGLQGLPEPQYNYEISLPELEEDGEGGKEDGMSVEEDAADRDAREAGEKRAKEEAELARRSTVLKRGLPRPIVVDPQVFQSRARATAAAAAEGDEKAAADALVQKELYAMLVHDQAKYPFVHVALGKXXXXXXXXXXXXXXXXXXDLPALPSKLLEQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAWLKAYHDLAYFPNRQTFGRLTGANKQDRLAALIHQFDSLQAQGVKEGKKAGKLEARLNLATGGYGKRASNLVQGVSDVLNQIDEMRLEVGCFRRLAAIEELALRTRLAKVQGEVEGLEGREEQLQVSYVELLDERDGLFALV 391
            K L++ L EGL  LP P+ +YEI +PE +ED E  + +     ED AD DAR   E+ A+ + EL +RS V++R LPRP  V+ ++ + ++           E+  A+ L++ E+  M ++D  K P    +  K                     A   ++L +                                        + W +    + Y P++  + R   A+K+DRL +   + ++ +    KE K+ GK+E +L + TGGY  RA  L++ + D   QI++  + +  FR L   E +A+  RL  +Q +V     RE++LQ  Y  L++ER+ L++ +
Sbjct:  475 KQLKSTLREGLSTLPAPRNDYEIVVPE-QEDSEPMEANSEPAVEDQADVDARLLAEQEARRKRELEKRSQVIQRSLPRPTEVNTKILRPQSEKQNLT-----EQQQAEELIKHEMITMQLYDSVKDPVPGQSQHKLEQLQSYFKANPYEDISQQELAKARQMLTE--------------------EMEVVKERMSHGELPLDVYAQVWQECLGQVLYLPSQHRYTRANLASKKDRLESAEKRLETNRRHMAKEAKRCGKIEKKLKILTGGYQARAQVLIKQLQDTFGQIEQNSVSLSTFRFLGEQEAIAVPRRLESLQEDVRRQMDREKELQQKYAGLVEERESLYSQI 797
[Close]
BLAST of NO01G01840 vs. NCBI_GenBank
Match: NP_612033.1 (cell division cycle 5, isoform A [Drosophila melanogaster] >NP_001163313.1 cell division cycle 5, isoform B [Drosophila melanogaster] >AAL28850.1 LD21614p [Drosophila melanogaster] >AAF47383.2 cell division cycle 5, isoform A [Drosophila melanogaster] >ACL88407.1 CG6905-PA, partial [synthetic construct] >ACZ94585.1 cell division cycle 5, isoform B [Drosophila melanogaster] >AOQ14687.1 Cdc5-PA [synthetic construct])

HSP 1 Score: 119.0 bits (297), Expect = 3.400e-23
Identity = 91/349 (26.07%), Postives = 159/349 (45.56%), Query Frame = 0 
Query:   42 KMLRAQLAEGLQGLPEPQYNYEISLPELEEDGEGGKEDGMSVEEDAADRDAREAGEKRAKEEAELARRSTVLKRGLPRPIVVDPQVFQSRARATAAAAAEGDEKAAADALVQKELYAMLVHDQAKYPFVHVALGKXXXXXXXXXXXXXXXXXXDLPALPSKLLEQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAWLKAYHDLAYFPNRQTFGRLTGANKQDRLAALIHQFDSLQAQGVKEGKKAGKLEARLNLATGGYGKRASNLVQGVSDVLNQIDEMRLEVGCFRRLAAIEELALRTRLAKVQGEVEGLEGREEQLQVSYVELLDERDGLFALV 391
            K L++ L +GL  LP P+ +YEI +PE +E+ E  + +     ED AD DAR   E+ A+ + EL +RS V++R LPRP  V+ ++ + ++           E+  A+ L++ E+  M ++D  K P    +  K                     A   ++L +                                        + W +    + Y P++  + R   A+K+DRL +   + ++ +    KE K+ GK+E +L + TGGY  RA  L++ + D   QI++  + +  FR L   E +A+  RL  +Q +V     RE++LQ  Y  L++ERD L++ +
Sbjct:  473 KQLKSTLRDGLSTLPAPRNDYEIVVPE-QEESERIETNSEPAVEDQADVDARLLAEQEARRKRELEKRSQVIQRSLPRPTEVNTKILRPQSEKQNLT-----EQQQAEELIKHEMITMQLYDSVKDPVPGQSQHKLEQLQSYFKANPYEDISQQELAKAKQMLTE--------------------EMEVVKERMAHGELPLDVYAQVWQECLGQVLYLPSQHRYTRANLASKKDRLESAEKRLETNRRHMAKEAKRCGKIEKKLKILTGGYQARAQVLIKQLQDTYGQIEQNSVSLSTFRFLGEQEAIAVPRRLESLQEDVRRQMDREKELQQKYASLVEERDSLYSQI 795
[Close]
BLAST of NO01G01840 vs. NCBI_GenBank
Match: XP_002012027.1 (uncharacterized protein Dmoj_GI16655 [Drosophila mojavensis] >EDW17158.1 uncharacterized protein Dmoj_GI16655 [Drosophila mojavensis])

HSP 1 Score: 119.0 bits (297), Expect = 3.400e-23
Identity = 94/346 (27.17%), Postives = 155/346 (44.80%), Query Frame = 0 
Query:   42 KMLRAQLAEGLQGLPEPQYNYEISLPELEEDGEGGKEDGMSVEEDAADRDAREAGEKRAKEEAELARRSTVLKRGLPRPIVVDPQVFQSRARATAAAAAEGDEKAAADALVQKELYAMLVHDQAKYPFVHVALGKXXXXXXXXXXXXXXXXXXDLPALPSKLLEQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAWLKAYHDLAYFPNRQTFGRLTGANKQDRLAALIHQFDSLQAQGVKEGKKAGKLEARLNLATGGYGKRASNLVQGVSDVLNQIDEMRLEVGCFRRLAAIEELALRTRLAKVQGEVEGLEGREEQLQVSYVELLDERDGLF 388
            K L++ L EGL  LP P+ +YEI +PE +ED E  +       ED AD DAR   E+ A+ + ELA+RS V++R LPRP  V+ ++ + ++           E+  A+ L++ E+  M ++D  + P    +  K                  +  A   ++L                                          + W +    + Y P++  + R   A+K+DRL +   + +  +    KE K+ GK+E +L + TGGY  RA  L++ + D   QI++  L +  FR L   E +A+  RL  +Q +V     RE++LQ  Y  L ++RD LF
Sbjct:  473 KQLKSSLREGLAALPTPRNDYEIVVPE-QEDSETMETSTEPAIEDQADVDARMLAEQEAQRKRELAKRSQVIQRNLPRPTEVNTKILRPQSEKQNLT-----EQQQAEELIKHEMITMQLYDSVRDPVPGQSQHKLEQLQSYFKANPYEEISQEELAEAKQMLAD--------------------EMEVVKERMSHGELPLDVYGQVWQECLGQVLYLPSQHRYTRANLASKKDRLESAEKRLEQNRRHMAKEAKRCGKIEKKLKILTGGYQARAQVLIKQLQDTYAQIEQNSLSLSTFRFLGEQEAIAVPRRLEALQEDVRRQMEREKELQQKYANLAEQRDALF 792
[Close]
BLAST of NO01G01840 vs. NCBI_GenBank
Match: XP_020808709.1 (cell division cycle 5-like protein [Drosophila serrata])

HSP 1 Score: 119.0 bits (297), Expect = 3.400e-23
Identity = 93/349 (26.65%), Postives = 157/349 (44.99%), Query Frame = 0 
Query:   42 KMLRAQLAEGLQGLPEPQYNYEISLPELEEDGEGGKEDGMSVEEDAADRDAREAGEKRAKEEAELARRSTVLKRGLPRPIVVDPQVFQSRARATAAAAAEGDEKAAADALVQKELYAMLVHDQAKYPFVHVALGKXXXXXXXXXXXXXXXXXXDLPALPSKLLEQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAWLKAYHDLAYFPNRQTFGRLTGANKQDRLAALIHQFDSLQAQGVKEGKKAGKLEARLNLATGGYGKRASNLVQGVSDVLNQIDEMRLEVGCFRRLAAIEELALRTRLAKVQGEVEGLEGREEQLQVSYVELLDERDGLFALV 391
            K L++ L EGL  LP P+ +YEI +PE +ED E  +       ED AD DAR   E+ A+ + EL +RS V++R LPRP  V+ ++ + ++           E+  A+ L++ E+  M ++D  K P    +  K                     A   ++L +                                        + W +    + Y P++  + R   A+K+DRL +   + ++ +    KE K+ GK+E +L + TGGY  RA  L++ + D   QI++  + +  FR L   E +A+  RL  +Q +V     RE++LQ  Y  L+ ERD L++ +
Sbjct:  472 KQLKSTLREGLSTLPAPRNDYEIVVPE-QEDSEPMEVSTEPAVEDQADVDARLLAEQEARRKRELEKRSQVIQRSLPRPTEVNTKILRPQSEKQNLT-----EQQQAEELIKHEMITMQLYDSVKDPVPGQSQHKLEQLQSYFKANPYEDISQQELAKARQMLNE--------------------EMEVVKERMSHGELPLDVYAQVWQECLGQVLYLPSQHRYTRANLASKKDRLESAEKRLETNRRHMAKEAKRCGKIEKKLKILTGGYQARAQVLIKQLQDTYGQIEQNIVSLSTFRFLGEQEGIAVPRRLESLQDDVRRQMDREKELQQKYASLVQERDSLYSQI 794
[Close]
BLAST of NO01G01840 vs. NCBI_GenBank
Match: XP_001971018.1 (uncharacterized protein Dere_GG14664 [Drosophila erecta] >EDV50044.1 uncharacterized protein Dere_GG14664 [Drosophila erecta])

HSP 1 Score: 118.6 bits (296), Expect = 4.400e-23
Identity = 91/349 (26.07%), Postives = 158/349 (45.27%), Query Frame = 0 
Query:   42 KMLRAQLAEGLQGLPEPQYNYEISLPELEEDGEGGKEDGMSVEEDAADRDAREAGEKRAKEEAELARRSTVLKRGLPRPIVVDPQVFQSRARATAAAAAEGDEKAAADALVQKELYAMLVHDQAKYPFVHVALGKXXXXXXXXXXXXXXXXXXDLPALPSKLLEQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAWLKAYHDLAYFPNRQTFGRLTGANKQDRLAALIHQFDSLQAQGVKEGKKAGKLEARLNLATGGYGKRASNLVQGVSDVLNQIDEMRLEVGCFRRLAAIEELALRTRLAKVQGEVEGLEGREEQLQVSYVELLDERDGLFALV 391
            K L++ L +GL  LP P+ +YEI +PE +E+ E  +       ED AD DAR   E+ A+ + EL +RS V++R LPRP  V+ ++ + ++           E+  A+ L++ E+  M ++D  K P    +  K                     A   ++L +                                        + W +    + Y P++  + R   A+K+DRL +   + ++ +    KE K+ GK+E +L + TGGY  RA  L++ + D   QI++  + +  FR L   E +A+  RL  +Q +V     RE++LQ  Y  L++ERD L++ +
Sbjct:  473 KQLKSTLRDGLSTLPAPRNDYEIVVPE-QEESERVETSSEPAVEDQADVDARLLAEQEARRKRELEKRSQVIQRSLPRPTEVNTKILRPQSEKQNLT-----EQQQAEELIKHEMITMQLYDSVKDPVPGQSQHKLEQLQSYFKANPYEDISQQELAKARQMLTE--------------------EMEVVKERMAHGELPLDVYAQVWQECLGQVLYLPSQHRYTRANLASKKDRLESAEKRLETNRRHMAKEAKRCGKIEKKLKILTGGYQARAQVLIKQLQDTYGQIEQNSVSLSTFRFLGEQEAIAVPRRLESLQEDVRRQMDREKELQQKYASLVEERDSLYSQI 795
[Close]
BLAST of NO01G01840 vs. NCBI_GenBank
Match: EDX07026.1 (GD25709 [Drosophila simulans])

HSP 1 Score: 118.6 bits (296), Expect = 4.400e-23
Identity = 91/349 (26.07%), Postives = 158/349 (45.27%), Query Frame = 0 
Query:   42 KMLRAQLAEGLQGLPEPQYNYEISLPELEEDGEGGKEDGMSVEEDAADRDAREAGEKRAKEEAELARRSTVLKRGLPRPIVVDPQVFQSRARATAAAAAEGDEKAAADALVQKELYAMLVHDQAKYPFVHVALGKXXXXXXXXXXXXXXXXXXDLPALPSKLLEQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAWLKAYHDLAYFPNRQTFGRLTGANKQDRLAALIHQFDSLQAQGVKEGKKAGKLEARLNLATGGYGKRASNLVQGVSDVLNQIDEMRLEVGCFRRLAAIEELALRTRLAKVQGEVEGLEGREEQLQVSYVELLDERDGLFALV 391
            K L++ L +GL  LP P+ +YEI +PE +E+ E  +       ED AD DAR   E+ A+ + EL +RS V++R LPRP  V+ ++ + ++           E+  A+ L++ E+  M ++D  K P    +  K                     A   ++L +                                        + W +    + Y P++  + R   A+K+DRL +   + ++ +    KE K+ GK+E +L + TGGY  RA  L++ + D   QI++  + +  FR L   E +A+  RL  +Q +V     RE++LQ  Y  L++ERD L++ +
Sbjct:  473 KQLKSTLRDGLSTLPAPRNDYEIVVPE-QEESERIETSSEPAVEDQADVDARLLAEQEARRKRELEKRSQVIQRSLPRPTEVNTKILRPQSEKQNLT-----EQQQAEELIKHEMITMQLYDSVKDPVPGQSQHKLEQLQSYFKANPYEDISQQELAKAKQMLTE--------------------EMEVVKERMAHGELPLDVYAQVWQECLGQVLYLPSQHRYTRANLASKKDRLESAEKRLETNRRHMAKEAKRCGKIEKKLKILTGGYQARAQVLIKQLQDTYGQIEQNSVSLSTFRFLGEQEAIAVPRRLESLQEDVRRQMDREKELQQKYASLVEERDSLYSQI 795
[Close]
BLAST of NO01G01840 vs. NCBI_GenBank
Match: XP_002081441.2 (uncharacterized protein Dsimw501_GD25709 [Drosophila simulans] >KMY96667.1 uncharacterized protein Dsimw501_GD25709 [Drosophila simulans])

HSP 1 Score: 118.6 bits (296), Expect = 4.400e-23
Identity = 91/349 (26.07%), Postives = 158/349 (45.27%), Query Frame = 0 
Query:   42 KMLRAQLAEGLQGLPEPQYNYEISLPELEEDGEGGKEDGMSVEEDAADRDAREAGEKRAKEEAELARRSTVLKRGLPRPIVVDPQVFQSRARATAAAAAEGDEKAAADALVQKELYAMLVHDQAKYPFVHVALGKXXXXXXXXXXXXXXXXXXDLPALPSKLLEQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAWLKAYHDLAYFPNRQTFGRLTGANKQDRLAALIHQFDSLQAQGVKEGKKAGKLEARLNLATGGYGKRASNLVQGVSDVLNQIDEMRLEVGCFRRLAAIEELALRTRLAKVQGEVEGLEGREEQLQVSYVELLDERDGLFALV 391
            K L++ L +GL  LP P+ +YEI +PE +E+ E  +       ED AD DAR   E+ A+ + EL +RS V++R LPRP  V+ ++ + ++           E+  A+ L++ E+  M ++D  K P    +  K                     A   ++L +                                        + W +    + Y P++  + R   A+K+DRL +   + ++ +    KE K+ GK+E +L + TGGY  RA  L++ + D   QI++  + +  FR L   E +A+  RL  +Q +V     RE++LQ  Y  L++ERD L++ +
Sbjct:  473 KQLKSTLRDGLSTLPAPRNDYEIVVPE-QEESERIETSSEPAVEDQADVDARLLAEQEARRKRELEKRSQVIQRSLPRPTEVNTKILRPQSEKQNLT-----EQQQAEELIKHEMITMQLYDSVKDPVPGQSQHKLEQLQSYFKANPYEDISQQELAKAKQMLTE--------------------EMEVVKERMAHGELPLDVYAQVWQECLGQVLYLPSQHRYTRANLASKKDRLESAEKRLETNRRHMAKEAKRCGKIEKKLKILTGGYQARAQVLIKQLQDTYGQIEQNSVSLSTFRFLGEQEAIAVPRRLESLQEDVRRQMDREKELQQKYASLVEERDSLYSQI 795
[Close]
BLAST of NO01G01840 vs. NCBI_GenBank
Match: XP_017066426.1 (PREDICTED: cell division cycle 5-like protein [Drosophila eugracilis])

HSP 1 Score: 118.6 bits (296), Expect = 4.400e-23
Identity = 93/349 (26.65%), Postives = 154/349 (44.13%), Query Frame = 0 
Query:   42 KMLRAQLAEGLQGLPEPQYNYEISLPELEEDGEGGKEDGMSVEEDAADRDAREAGEKRAKEEAELARRSTVLKRGLPRPIVVDPQVFQSRARATAAAAAEGDEKAAADALVQKELYAMLVHDQAKYPFVHVALGKXXXXXXXXXXXXXXXXXXDLPALPSKLLEQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAWLKAYHDLAYFPNRQTFGRLTGANKQDRLAALIHQFDSLQAQGVKEGKKAGKLEARLNLATGGYGKRASNLVQGVSDVLNQIDEMRLEVGCFRRLAAIEELALRTRLAKVQGEVEGLEGREEQLQVSYVELLDERDGLFALV 391
            K L++ L EGL  LP P+ +YEI +PE +ED E          ED AD DAR   E+ A+ + EL +RS V++R LPRP  V+ ++ +  +           E+  A+ L++ E+  M ++D  K P    +  K                     A   ++L +                                        + W +    + Y P++  + R   A+K+DRL +   + ++ +    KE K+ GK+E +L + TGGY  RA  L++ + D   QI++  + +  FR L   E +A+  RL  +  +V     RE++LQ  Y  L++ERD LF  +
Sbjct:  473 KQLKSTLREGLSTLPAPRNDYEIVVPE-QEDSEPMDISSEPAVEDQADVDARVLAEQEARRKRELEKRSQVIQRSLPRPTEVNTKILRPPSEKQNLT-----EQQQAEELIKHEMITMQLYDSVKDPVPGQSQHKLEQLQSYFKANPYEDISPQELAKAKQMLTE--------------------EMEVVKERMSHGELPLEVYAQVWQECLGQVLYLPSQHRYTRANLASKKDRLESAEKRLETNRRHMAKEAKRCGKIEKKLKILTGGYQARAQVLIKQLQDTYGQIEQNSVSLSTFRFLGEQEAIAVPRRLGSLHEDVRRQMDREKELQQKYASLVEERDSLFTQI 795
The following BLAST results are available for this feature:
BLAST of NO01G01840 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_004334018.12.000e-2328.30Myblike DNA binding protein, putative [Acanthamoeb... [more]
XP_016975377.12.000e-2326.86PREDICTED: cell division cycle 5-like protein [Dro... [more]
XP_017127776.12.000e-2326.36PREDICTED: cell division cycle 5-like protein [Dro... [more]
NP_612033.13.400e-2326.07cell division cycle 5, isoform A [Drosophila melan... [more]
XP_002012027.13.400e-2327.17uncharacterized protein Dmoj_GI16655 [Drosophila m... [more]
XP_020808709.13.400e-2326.65cell division cycle 5-like protein [Drosophila ser... [more]
XP_001971018.14.400e-2326.07uncharacterized protein Dere_GG14664 [Drosophila e... [more]
EDX07026.14.400e-2326.07GD25709 [Drosophila simulans][more]
XP_002081441.24.400e-2326.07uncharacterized protein Dsimw501_GD25709 [Drosophi... [more]
XP_017066426.14.400e-2326.65PREDICTED: cell division cycle 5-like protein [Dro... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008165NSK008165Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G01840.1NO01G01840.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|627673gene_164Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100007g5gene1508Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G01840.1NO01G01840.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G01840 ID=NO01G01840|Name=NO01G01840|organism=Nannochloropsis oceanica|type=gene|length=1224bp
ATGCGCAGTCGCGCGGGGGGGATGACGCCCATGAGGGACGAGTTAGGGTT
GAACCAGGGAGGGGGAGGGTCAGGGATGGAGCAGCAGCAACAGTTAATGG
TGATGGGGGAGAAGAGGCGACAGAAGATGTTGAGGGCCCAGCTGGCCGAG
GGATTGCAAGGGCTTCCTGAGCCTCAGTACAACTACGAAATCTCGCTGCC
GGAGCTGGAGGAGGATGGGGAGGGAGGGAAGGAGGATGGGATGTCTGTAG
AGGAGGATGCGGCGGACCGCGATGCACGGGAAGCTGGAGAGAAGCGGGCG
AAGGAAGAGGCGGAGCTTGCGAGGAGGTCGACGGTGTTGAAGAGGGGCCT
GCCGAGGCCGATTGTTGTGGACCCCCAAGTGTTCCAGTCGCGGGCAAGAG
CGACAGCAGCCGCAGCTGCTGAGGGAGATGAGAAGGCAGCGGCGGACGCG
CTGGTCCAGAAGGAGTTATATGCTATGTTAGTGCATGACCAAGCCAAATA
CCCTTTCGTTCACGTGGCGCTGGGGAAGAAGAAGGGAGGGAAGAGTAGCG
GCAGCAGTGGTAGTAGTAATGGAGGAGGTGTGGATCTGCCTGCACTCCCT
TCTAAGCTTTTAGAGCAAGCCCGGGCGTTGGTCGAGGAAGAGGTGGCGGC
TTCGCGCAAGAATAAAAACGAAATGGTGAATGGGGGAGACGGAGGAAGAG
AGGGAGAGAGGGAGGATGACGACCCGGTGGTGGTGGAGGAGGCTTGGTTG
AAGGCCTATCATGACCTTGCTTATTTTCCCAACAGGCAGACGTTCGGTAG
GCTGACGGGTGCAAATAAGCAGGATCGCTTAGCGGCGCTTATCCATCAAT
TTGATTCGTTGCAGGCCCAGGGAGTGAAGGAGGGGAAGAAAGCGGGGAAA
TTGGAGGCGAGGCTGAACTTGGCCACGGGGGGATATGGGAAGAGAGCGTC
GAATTTAGTGCAAGGTGTGAGTGATGTGTTGAATCAGATTGATGAGATGC
GTTTGGAGGTGGGGTGTTTTCGACGGTTGGCTGCGATTGAGGAGTTGGCG
CTGAGGACACGCTTGGCCAAGGTCCAGGGAGAGGTGGAGGGATTGGAAGG
GAGGGAGGAGCAACTGCAGGTAAGTTATGTGGAGTTATTGGACGAGAGGG
ATGGATTGTTTGCGCTTGTTGGTGGAAGAGGGGAGGAAGGGATAAATGGT
AGAGAAGAGAGGATGGAGGAATAA
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protein sequence of NO01G01840.1

>NO01G01840.1-protein ID=NO01G01840.1-protein|Name=NO01G01840.1|organism=Nannochloropsis oceanica|type=polypeptide|length=408bp
MRSRAGGMTPMRDELGLNQGGGGSGMEQQQQLMVMGEKRRQKMLRAQLAE
GLQGLPEPQYNYEISLPELEEDGEGGKEDGMSVEEDAADRDAREAGEKRA
KEEAELARRSTVLKRGLPRPIVVDPQVFQSRARATAAAAAEGDEKAAADA
LVQKELYAMLVHDQAKYPFVHVALGKKKGGKSSGSSGSSNGGGVDLPALP
SKLLEQARALVEEEVAASRKNKNEMVNGGDGGREGEREDDDPVVVEEAWL
KAYHDLAYFPNRQTFGRLTGANKQDRLAALIHQFDSLQAQGVKEGKKAGK
LEARLNLATGGYGKRASNLVQGVSDVLNQIDEMRLEVGCFRRLAAIEELA
LRTRLAKVQGEVEGLEGREEQLQVSYVELLDERDGLFALVGGRGEEGING
REERMEE*
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Synonyms
Publications