Naga_100007g5, gene1508 (gene) Nannochloropsis gaditana

Overview
NameNaga_100007g5
Unique Namegene1508
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:951446..954434 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100007g5
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:951446..954434 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL091ngnoL091Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G01840NO01G01840Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1568rna1568-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1568rna1568Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1568

>rna1568-protein ID=rna1568-protein|Name=rna1568|organism=Nannochloropsis gaditana|type=polypeptide|length=859bp
MGIRIMVKGGVWKNSEDEILKAAVMKYGLNQWPRVASLLNRKSAAQCKAR
WYEWLDPSIKKTEWTREEEEKLLHLAKILPAQWRTIAPIVGRTPAQCLEH
YERLLDAAQQKTGDMDAGEIKDDPRKLRPGEIDTAPETKPARPDPIDMDE
DEKEMLSEARARLANTKGKKAKRKAREKMLMEAKRLASLQKRRELKAAGL
ELKMREKKRKYIDYGREIPFQRTAPAGFYATGAEKLEGEKQALDPRFEAL
RVDKMEDERRDEEESRLRNQDKKRHKKLVQENLPQMVQALNQLNDPASIR
RRVPLSLPAPQVTDRDLEEIVKVGAQAAAVGGGEGATAGLLGDYRDRATP
LATPMRTPSTAPGQDVVMQEARNLLAMRAAETPLQGGEAVMSRLEGGTGF
EGHEPRGLGGGGMTPGGGMTPMTARNEEGGRTPLSSGRVGGSSVASIKSR
AHAAGGATPMRDELGLNQMGGSEEQQQLMVMSEKRRQKALRAQLAEGLRS
LPEAQYTYEISVPTMEEEEERVTDVGKEEDAADRDARMAAKKLAVEEAEL
ARRSAVLKRGLPRPRIVDPDMFASRVRAATAEADEIAAADAMVQQELLAV
LRAEAAKYPVREAGGKGNGRSSKGTDGDRGVLPIIPPQMLSTARDLVAEE
AAKLRKAVDSYGGEGGSEESGKGEGAGVDSQGDMCPVALERDWLKGYNDL
AYFPGRQAFGRLTGASKQDRLAAVVHEFNTLAGHVEKVGKRASKLDTRLN
LATGGYVKRATALLHGVSEALDQIDEMRLEVGCFRRLKAMEEKALVTRVA
EVNAQADSVAKREEQLQLSYVELLDERDRLFGVLHGHEGEEDRGEEHNGL
NGKVTVAEE
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Synonyms
Publications