NO01G01840, NO01G01840 (gene) Nannochloropsis oceanica

Overview
NameNO01G01840
Unique NameNO01G01840
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1224
Alignment locationchr1:466186..467409 -

Link to JBrowse

Properties
Property NameValue
DescriptionPre-mRNA-splicing factor CDC5/CEF1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:466186..467409 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021786DUF3351
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Homology
[Close]
BLAST of NO01G01840 vs. NCBI_GenBank
Match: XP_005855805.1 (pre-mRNA-splicing factor CDC5/CEF1 [Nannochloropsis gaditana CCMP526] >EKU20552.1 pre-mRNA-splicing factor CDC5/CEF1 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 320.5 bits (820), Expect = 7.700e-84
Identity = 226/419 (53.94%), Postives = 266/419 (63.48%), Query Frame = 0 
Query:    5 AGGMTPMRDELGLNQGXXXXXXXXXXXXXXXXXXXXXKMLRAQLAEGLQGLPEPQYNYEISLPELEEDGEGGKEDGMSVEEDAADRDAREAGEKRAKEEAELARRSTVLKRGLPRPIVVDPQVFQSRARATAAAAAEGDEKAAADALVQKELYAMLVHDQAKYPFVHVALGKXXXXXXXXXXXXXXXXXXDLPALPSKLLEQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEA--------WLKAYHDLAYFPNRQTFGRLTGANKQDRLAALIHQFDSLQAQGVKEGKKAGKLEARLNLATGGYGKRASNLVQGVSDVLNQIDEMRLEVGCFRRLAAIEELALRTRLAKVQGEVEGLEGREEQLQVSYVELLDERDGLFALVGG------RGEE--GINGREERMEE 408
            AGG TPMRDELGLNQ      XXXXXXXXXXXXXXX K LRAQLAEGL+ LPE QY YEIS+P +EE+ E   + G   EEDAADRDAR A +K A EEAELARRS VLKRGLPRP +VDP +F SR R   AA AE DE AAADA+VQ+EL A+L  + AKYP V  A GK                   LP +P ++L  AR                                      +         WLK Y+DLAYFP RQ FGRLTGA+KQDRLAA++H+F++L     K GK+A KL+ RLNLATGGY KRA+ L+ GVS+ L+QIDEMRLEVGCFRRL A+EE AL TR+A+V  + + +  REEQLQ+SYVELLDERD LF ++ G      RGEE  G+NG+    EE
Sbjct:  454 AGGATPMRDELGLNQ---MGGXXXXXXXXXXXXXXXQKALRAQLAEGLRSLPEAQYTYEISVPTMEEEEERVTDVGK--EEDAADRDARMAAKKLAVEEAELARRSAVLKRGLPRPRIVDPDMFASRVR---AATAEADEIAAADAMVQQELLAVLRAEAAKYP-VREAGGKGNGRSSKGTDGDRGV----LPIIPPQMLSTARDLVAEEAAKLRKAVDSYGGEGGSEESGKGEGAGVDSQGDMCPVALERDWLKGYNDLAYFPGRQAFGRLTGASKQDRLAAVVHEFNTLAGHVEKVGKRASKLDTRLNLATGGYVKRATALLHGVSEALDQIDEMRLEVGCFRRLKAMEEKALVTRVAEVNAQADSVAKREEQLQLSYVELLDERDRLFGVLHGHEGEEDRGEEHNGLNGKVTVAEE 859
[Close]
BLAST of NO01G01840 vs. NCBI_GenBank
Match: EWM29181.1 (cell division cycle 5-like protein [Nannochloropsis gaditana])

HSP 1 Score: 320.5 bits (820), Expect = 7.700e-84
Identity = 226/419 (53.94%), Postives = 266/419 (63.48%), Query Frame = 0 
Query:    5 AGGMTPMRDELGLNQGXXXXXXXXXXXXXXXXXXXXXKMLRAQLAEGLQGLPEPQYNYEISLPELEEDGEGGKEDGMSVEEDAADRDAREAGEKRAKEEAELARRSTVLKRGLPRPIVVDPQVFQSRARATAAAAAEGDEKAAADALVQKELYAMLVHDQAKYPFVHVALGKXXXXXXXXXXXXXXXXXXDLPALPSKLLEQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEA--------WLKAYHDLAYFPNRQTFGRLTGANKQDRLAALIHQFDSLQAQGVKEGKKAGKLEARLNLATGGYGKRASNLVQGVSDVLNQIDEMRLEVGCFRRLAAIEELALRTRLAKVQGEVEGLEGREEQLQVSYVELLDERDGLFALVGG------RGEE--GINGREERMEE 408
            AGG TPMRDELGLNQ      XXXXXXXXXXXXXXX K LRAQLAEGL+ LPE QY YEIS+P +EE+ E   + G   EEDAADRDAR A +K A EEAELARRS VLKRGLPRP +VDP +F SR R   AA AE DE AAADA+VQ+EL A+L  + AKYP V  A GK                   LP +P ++L  AR                                      +         WLK Y+DLAYFP RQ FGRLTGA+KQDRLAA++H+F++L     K GK+A KL+ RLNLATGGY KRA+ L+ GVS+ L+QIDEMRLEVGCFRRL A+EE AL TR+A+V  + + +  REEQLQ+SYVELLDERD LF ++ G      RGEE  G+NG+    EE
Sbjct:  454 AGGATPMRDELGLNQ---MGGXXXXXXXXXXXXXXXQKALRAQLAEGLRSLPEAQYTYEISVPTMEEEEERVTDVGK--EEDAADRDARMAAKKLAVEEAELARRSAVLKRGLPRPRIVDPDMFASRVR---AATAEADEIAAADAMVQQELLAVLRAEAAKYP-VREAGGKGNGRSSKGTDGDRGV----LPIIPPQMLSTARDLVAEEAAKLRKAVDSYGGEGGSEESGKGEGAGVDSQGDMCPVALERDWLKGYNDLAYFPGRQAFGRLTGASKQDRLAAVVHEFNTLAGHVEKVGKRASKLDTRLNLATGGYVKRATALLHGVSEALDQIDEMRLEVGCFRRLKAMEEKALVTRVAEVNAQADSVAKREEQLQLSYVELLDERDRLFGVLHGHEGEEDRGEEHNGLNGKVTVAEE 859
[Close]
BLAST of NO01G01840 vs. NCBI_GenBank
Match: XP_005855807.1 (cell division cycle 5-like protein [Nannochloropsis gaditana CCMP526] >EKU20554.1 cell division cycle 5-like protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 248.1 bits (632), Expect = 4.900e-62
Identity = 158/320 (49.38%), Postives = 192/320 (60.00%), Query Frame = 0 
Query:  104 AELARRSTVLKRGLPRPIVVDPQVFQSRARATAAAAAEGDEKAAADALVQKELYAMLVHDQAKYPFVHVALGKXXXXXXXXXXXXXXXXXXDLPALPSKLLEQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEA--------WLKAYHDLAYFPNRQTFGRLTGANKQDRLAALIHQFDSLQAQGVKEGKKAGKLEARLNLATGGYGKRASNLVQGVSDVLNQIDEMRLEVGCFRRLAAIEELALRTRLAKVQGEVEGLEGREEQLQVSYVELLDERDGLFALVGG------RGEE--GINGREERMEE 408
            AELARRS VLKRGLPRP +VDP +F SR R   AA AE DE AAADA+VQ+EL A+L  + AKYP V  A GK                   LP +P ++L  AR                                      +         WLK Y+DLAYFP RQ FGRLTGA+KQDRLAA++H+F++L     K GK+A KL+ RLNLATGGY KRA+ L+ GVS+ L+QIDEMRLEVGCFRRL A+EE AL TR+A+V  + + +  REEQLQ+SYVELLDERD LF ++ G      RGEE  G+NG+    EE
Sbjct:  767 AELARRSAVLKRGLPRPRIVDPDMFASRVR---AATAEADEIAAADAMVQQELLAVLRAEAAKYP-VREAGGKGNGRSSKGTDGDRGV----LPIIPPQMLSTARDLVAEEAAKLRKAVDSYGGEGGSEESGKGEGAGVDSQGDMCPVALERDWLKGYNDLAYFPGRQAFGRLTGASKQDRLAAVVHEFNTLAGHVEKVGKRASKLDTRLNLATGGYVKRATALLHGVSEALDQIDEMRLEVGCFRRLKAMEEKALVTRVAEVNAQADSVAKREEQLQLSYVELLDERDRLFGVLHGHEGEEDRGEEHNGLNGKVTVAEE 1078
[Close]
BLAST of NO01G01840 vs. NCBI_GenBank
Match: ORY02586.1 (hypothetical protein K493DRAFT_328568 [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 122.5 bits (306), Expect = 3.100e-24
Identity = 94/343 (27.41%), Postives = 157/343 (45.77%), Query Frame = 0 
Query:   44 LRAQLAEGLQGLPEPQYNYEISLPELEEDGEGGKEDGMSVEEDAADRDAREAGEKRAKEEAELARRSTVLKRGLPRPIVVDPQVFQSRARATAAAAAEGDEKAAADALVQKELYAMLVHDQAKYPFVHVALGKXXXXXXXXXXXXXXXXXXDLPALPSKLLEQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAWLKAYHDLAYFPNRQTFGRLTGANKQDRLAALIHQFDSLQAQGVKEGKKAGKLEARLNLATGGYGKRASNLVQGVSDVLNQIDEMRLEVGCFRRLAAIEELALRTRLAKVQGEVEGLEGREEQLQVSYVELLDERDGL 387
            +R Q++ GL  LP P+  +EI LPE   D   G     ++EEDAAD D R    + A+++AEL RR+ V++R LPRP+ ++ +          AA  E +    A  L+ +EL ++L +DQAK+PF +    K                  +L       L +AR                                      EAW + Y    Y P+ + + +     + +R+A++    +  + +  KE  +A K+E +LN+  GGY  R+  LV+ +S    ++D++ +E+  FR L  +E++A+  R+  +Q +V  L  RE +LQ  Y  L  ER  +
Sbjct:  456 VRKQVSLGLANLPAPKNEFEIRLPEEASDDTSGSMAPSTIEEDAADADKRRKELRLAQKQAELKRRTQVIQRQLPRPMSINVE------GILGAAQDEEELLRQAQKLISEELVSVLAYDQAKFPFGNGQTSK----------------RVNLEQFTDDELHEAR----------ALIKQETDQLLGGNGNTESTIPDMDAFEEAWQRTYGSYIYAPSLEKYVKFEDVGEGERIASMRDILEKSRKKMGKEAARAAKVEKKLNVVLGGYQARSEALVEKLSAAYEELDQVTIELSSFRNLNILEKVAIPQRIHSIQSQVHHLTNRETELQKQYANLNVERQDI 766
[Close]
BLAST of NO01G01840 vs. NCBI_GenBank
Match: XP_002093004.1 (uncharacterized protein Dyak_GE21025 [Drosophila yakuba] >EDW92716.1 uncharacterized protein Dyak_GE21025 [Drosophila yakuba])

HSP 1 Score: 121.7 bits (304), Expect = 5.200e-24
Identity = 94/350 (26.86%), Postives = 159/350 (45.43%), Query Frame = 0 
Query:   42 KMLRAQLAEGLQGLPEPQYNYEISLPELEEDGEGGKEDGMSVEEDAADRDAREAGEKRAKEEAELARRSTVLKRGLPRPIVVDPQVFQSRARATAAAAAEGDEKAAADALVQKELYAMLVHDQAKYPFVHVALGK-XXXXXXXXXXXXXXXXXXDLPALPSKLLEQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAWLKAYHDLAYFPNRQTFGRLTGANKQDRLAALIHQFDSLQAQGVKEGKKAGKLEARLNLATGGYGKRASNLVQGVSDVLNQIDEMRLEVGCFRRLAAIEELALRTRLAKVQGEVEGLEGREEQLQVSYVELLDERDGLFALV 391
            K L++ L +GL  LP P+ +YEI +PE +E+ EG +       ED AD DAR   E+ A+ + EL +RS V++R LPRP  V+ ++ + ++           E+  A+ L++ E+  M ++D  K P    +  K                   DL      L E+                                        + W +    + Y P++  + R   A+K+DRL +   + ++ +    KE K+ GK+E +L + TGGY  RA  L++ + D   QI++  + +  FR L   E +A+  RL  +Q +V     RE++LQ  Y  L++ERD L++ +
Sbjct:  473 KQLKSTLRDGLSTLPAPRNDYEIVVPE-QEESEGVETRSEPAVEDQADVDARLLAEQEARRKRELEKRSQVIQRSLPRPTEVNTKILRPQSEKQNLT-----EQQQAEELIKHEMITMQLYDSVKDPVPGQSQHKLEQLQSYFKANPYEDISQQDLAKARQMLTEEME---------------------VVKERMAHGELPLDVYAQVWQECLGQVLYLPSQHRYTRANLASKKDRLESAEKRLETNRRHMAKEAKRCGKIEKKLKILTGGYQARAQVLIKQLQDTYGQIEQNSVSLSTFRFLGEQEAIAVPRRLESLQEDVRRQMDREKELQQKYASLVEERDSLYSQI 795
[Close]
BLAST of NO01G01840 vs. NCBI_GenBank
Match: XP_016955061.1 (PREDICTED: cell division cycle 5-like protein [Drosophila biarmipes])

HSP 1 Score: 121.7 bits (304), Expect = 5.200e-24
Identity = 92/349 (26.36%), Postives = 158/349 (45.27%), Query Frame = 0 
Query:   42 KMLRAQLAEGLQGLPEPQYNYEISLPELEEDGEGGKEDGMSVEEDAADRDAREAGEKRAKEEAELARRSTVLKRGLPRPIVVDPQVFQSRARATAAAAAEGDEKAAADALVQKELYAMLVHDQAKYPFVHVALGKXXXXXXXXXXXXXXXXXXDLPALPSKLLEQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAWLKAYHDLAYFPNRQTFGRLTGANKQDRLAALIHQFDSLQAQGVKEGKKAGKLEARLNLATGGYGKRASNLVQGVSDVLNQIDEMRLEVGCFRRLAAIEELALRTRLAKVQGEVEGLEGREEQLQVSYVELLDERDGLFALV 391
            K L++ L EGL  LP P+ +YEI +PE +ED E  +       ED AD DAR   E+ A+ + EL +RS V++R LPRP  V+ ++ + ++           E+  A+ L++ E+  M ++D  K P    +  K                     A   ++L +                                        + W +    + Y P++  + R   A+K+DRL +   + ++ +    KE K+ GK+E +L + TGGY  RA  L++ + D   QI++  + +  FR L   E +A+  RL  +Q +V     RE++LQ  Y  L++ER+ L++ +
Sbjct:  473 KQLKSTLREGLSTLPAPRNDYEIVVPE-QEDSEPAETSSEPAVEDQADVDARLLAEQEARRKRELEKRSQVIQRSLPRPTEVNTKILRPQSEKQNLT-----EQQQAEELIKHEMITMQLYDSVKDPVPGQSQHKLEQLQSYFKANPYEDISQQELAKAKQMLNE--------------------EMEVVKERMSHGELPLDVYAQVWQECLGQVLYLPSQHRYTRANLASKKDRLESAEKRLETNRRHMAKEAKRCGKIEKKLKILTGGYQARAQVLIKQLQDTYGQIEQNSVSLSTFRFLGEQEAIAVPRRLESLQEDVRRQMDREKELQQKYASLVEERESLYSQI 795
[Close]
BLAST of NO01G01840 vs. NCBI_GenBank
Match: XP_016933731.1 (PREDICTED: cell division cycle 5-like protein [Drosophila suzukii])

HSP 1 Score: 121.3 bits (303), Expect = 6.900e-24
Identity = 93/349 (26.65%), Postives = 158/349 (45.27%), Query Frame = 0 
Query:   42 KMLRAQLAEGLQGLPEPQYNYEISLPELEEDGEGGKEDGMSVEEDAADRDAREAGEKRAKEEAELARRSTVLKRGLPRPIVVDPQVFQSRARATAAAAAEGDEKAAADALVQKELYAMLVHDQAKYPFVHVALGKXXXXXXXXXXXXXXXXXXDLPALPSKLLEQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAWLKAYHDLAYFPNRQTFGRLTGANKQDRLAALIHQFDSLQAQGVKEGKKAGKLEARLNLATGGYGKRASNLVQGVSDVLNQIDEMRLEVGCFRRLAAIEELALRTRLAKVQGEVEGLEGREEQLQVSYVELLDERDGLFALV 391
            K L++ L EGL  LP P+ +YEI +PE +ED E  +       ED AD DAR   E+ A+ + EL +RS V++R LPRP  V+ ++ + ++           E+  A+ L++ E+  M ++D  K P    +  K                     A   +LL +                                        + W +    + Y P++  + R   A+K+DRL +   + ++ +    KE K+ GK+E +L + TGGY  RA  L++ + D   QI++  + +  FR L   E +A+  RL  +Q +V     RE++LQ  Y  L++ER+ L++ +
Sbjct:  473 KQLKSTLREGLSTLPAPRNDYEIVVPE-QEDSEPMETSSEPAVEDQADVDARLLAEQEARRKRELEKRSQVIQRSLPRPTEVNTKILRPQSEKQNLT-----EQQQAEELIKHEMITMQLYDSVKDPVPGQSQHKLEQLQSYFKANPYEDISQQELAKAKQLLNE--------------------EMEVVKERMSHGELPLDVYAQVWQECLGQVLYLPSQHRYTRANLASKKDRLESAEKRLETNRRHMAKEAKRCGKIEKKLKILTGGYQARAQVLIKQLQDTYGQIEQNSVSLSTFRFLGEQEAIAVPRRLESLQEDVRRQMDREKELQQKYASLVEERESLYSQI 795
[Close]
BLAST of NO01G01840 vs. NCBI_GenBank
Match: XP_017011333.1 (PREDICTED: cell division cycle 5-like protein [Drosophila takahashii])

HSP 1 Score: 121.3 bits (303), Expect = 6.900e-24
Identity = 92/349 (26.36%), Postives = 160/349 (45.85%), Query Frame = 0 
Query:   42 KMLRAQLAEGLQGLPEPQYNYEISLPELEEDGEGGKEDGMSVEEDAADRDAREAGEKRAKEEAELARRSTVLKRGLPRPIVVDPQVFQSRARATAAAAAEGDEKAAADALVQKELYAMLVHDQAKYPFVHVALGKXXXXXXXXXXXXXXXXXXDLPALPSKLLEQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAWLKAYHDLAYFPNRQTFGRLTGANKQDRLAALIHQFDSLQAQGVKEGKKAGKLEARLNLATGGYGKRASNLVQGVSDVLNQIDEMRLEVGCFRRLAAIEELALRTRLAKVQGEVEGLEGREEQLQVSYVELLDERDGLFALV 391
            K L++ L EGL  LP P+ +YEI +PE +ED E  + +     ED AD DAR   E+ AK + EL +RS V++R LPRP  V+ ++ + ++           E+  A+ L++ E+  M ++D  K P    +  K                     A   ++L++                                        + W +    + Y P++  + R   A+K+DRL +   + ++ +    KE K+ GK+E +L + TGGY  RA  L++ + D   QI++  + +  FR L   E +A+  RL  +Q +V     RE++LQ  Y  L++ER+ +++ +
Sbjct:  472 KQLKSTLREGLSTLPAPRNDYEIVVPE-QEDSEPMETNTEPAVEDQADVDARLLAEQEAKRKRELEKRSQVIQRSLPRPTEVNTKILRPQSEKQNLT-----EQQQAEELIKHEMITMQLYDSVKDPVPGQSQHKLEQLQSYFKANPYEDISQQELATARQMLDE--------------------EMEVVKERMSHGELPLDVYAQVWQECLGQVLYLPSQHRYTRANLASKKDRLESAEKRLETNRRHMAKEAKRCGKIEKKLKILTGGYQARAQVLIKQLQDTYGQIEQNSVSLSTFRFLGEQEAIAVPRRLESLQEDVRRQMDREKELQQKYASLVEERESIYSQI 794
[Close]
BLAST of NO01G01840 vs. NCBI_GenBank
Match: XP_017028191.1 (PREDICTED: cell division cycle 5-like protein [Drosophila kikkawai])

HSP 1 Score: 120.9 bits (302), Expect = 8.900e-24
Identity = 93/349 (26.65%), Postives = 159/349 (45.56%), Query Frame = 0 
Query:   42 KMLRAQLAEGLQGLPEPQYNYEISLPELEEDGEGGKEDGMSVEEDAADRDAREAGEKRAKEEAELARRSTVLKRGLPRPIVVDPQVFQSRARATAAAAAEGDEKAAADALVQKELYAMLVHDQAKYPFVHVALGKXXXXXXXXXXXXXXXXXXDLPALPSKLLEQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAWLKAYHDLAYFPNRQTFGRLTGANKQDRLAALIHQFDSLQAQGVKEGKKAGKLEARLNLATGGYGKRASNLVQGVSDVLNQIDEMRLEVGCFRRLAAIEELALRTRLAKVQGEVEGLEGREEQLQVSYVELLDERDGLFALV 391
            K L++ L EGL  LP P+ +YEI +PE +ED E  +       ED AD DAR   E+ A+ + EL +RS V++R LPRP  V+ ++ + ++           E+  A+ L++ E+  M ++D  K P    +  K                     A   ++L +                                        + W +    + Y P++  + R   A+K+DRL +   + ++ +    KE K+ GK+E +L + TGGY  RA  L++ + D   QI++  + +  FR L   E +A+  RL  +Q +V     RE++LQ+ Y  L++ERD L++ +
Sbjct:  472 KQLKSTLREGLSTLPAPRNDYEIVVPE-QEDSEPMEVGTEPAVEDQADVDARLLAEQEARRKRELEKRSQVIQRSLPRPTEVNTKILRPQSEKQNLT-----EQQQAEELIKHEMITMQLYDSVKDPVPGQSQHKLEQLQSYFKANPYEDISQQELAKARQMLNE--------------------EMEVVKERMSHGELPLDVYAQVWQECLGQVLYLPSQHRYTRANLASKKDRLESAEKRLETNRRHMAKEAKRCGKIEKKLKILTGGYQARAQVLIKQLQDTYGQIEQNTVSLSTFRFLGEQEGIAVPRRLESLQEDVRRQMDREKELQLKYASLVEERDSLYSQI 794
[Close]
BLAST of NO01G01840 vs. NCBI_GenBank
Match: XP_017057700.1 (PREDICTED: cell division cycle 5-like protein [Drosophila ficusphila])

HSP 1 Score: 120.9 bits (302), Expect = 8.900e-24
Identity = 92/349 (26.36%), Postives = 158/349 (45.27%), Query Frame = 0 
Query:   42 KMLRAQLAEGLQGLPEPQYNYEISLPELEEDGEGGKEDGMSVEEDAADRDAREAGEKRAKEEAELARRSTVLKRGLPRPIVVDPQVFQSRARATAAAAAEGDEKAAADALVQKELYAMLVHDQAKYPFVHVALGKXXXXXXXXXXXXXXXXXXDLPALPSKLLEQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAWLKAYHDLAYFPNRQTFGRLTGANKQDRLAALIHQFDSLQAQGVKEGKKAGKLEARLNLATGGYGKRASNLVQGVSDVLNQIDEMRLEVGCFRRLAAIEELALRTRLAKVQGEVEGLEGREEQLQVSYVELLDERDGLFALV 391
            K L++ L EGL  LP P+ +YEI +PE +ED E  +       ED AD DAR   E+ A+ + EL +RS V++R LPRP  V+ ++ + ++           E+  A+ L++ E+  M ++D  K P    +  K                     A   ++L +                                        + W +    + Y P++  + R   A+K+DRL +   + ++ +    KE K+ GK+E +L + TGGY  RA  L++ + D   QI++  + +  FR L   E +A+  RL  +Q +V     RE++LQ  Y  L++ER+ L++ +
Sbjct:  471 KQLKSTLREGLSTLPAPRNDYEIVVPE-QEDSEAMETSSEPAVEDQADVDARLLAEQEARRKRELEKRSQVIQRSLPRPTEVNTKILRPQSEKQNLT-----EQQQAEELIKHEMITMQLYDSVKDPVPGQSQHKLEQLQSYFKANPYEDISQQELARAKQMLAE--------------------EMEVVKERMSHGELPLDVYAQVWQECLGQVLYLPSQHRYTRANLASKKDRLESAEKRLETNRRHMAKEAKRCGKIEKKLKILTGGYQARAQVLIKQLQDTYGQIEQNSVSLSTFRFLGEQEAIAVPRRLESLQEDVRRQMDREKELQQKYASLVEERESLYSQI 793
The following BLAST results are available for this feature:
BLAST of NO01G01840 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005855805.17.700e-8453.94pre-mRNA-splicing factor CDC5/CEF1 [Nannochloropsi... [more]
EWM29181.17.700e-8453.94cell division cycle 5-like protein [Nannochloropsi... [more]
XP_005855807.14.900e-6249.38cell division cycle 5-like protein [Nannochloropsi... [more]
ORY02586.13.100e-2427.41hypothetical protein K493DRAFT_328568 [Basidiobolu... [more]
XP_002093004.15.200e-2426.86uncharacterized protein Dyak_GE21025 [Drosophila y... [more]
XP_016955061.15.200e-2426.36PREDICTED: cell division cycle 5-like protein [Dro... [more]
XP_016933731.16.900e-2426.65PREDICTED: cell division cycle 5-like protein [Dro... [more]
XP_017011333.16.900e-2426.36PREDICTED: cell division cycle 5-like protein [Dro... [more]
XP_017028191.18.900e-2426.65PREDICTED: cell division cycle 5-like protein [Dro... [more]
XP_017057700.18.900e-2426.36PREDICTED: cell division cycle 5-like protein [Dro... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL006nonsL006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008165NSK008165Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G01840.1NO01G01840.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|627673gene_164Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100007g5gene1508Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G01840.1NO01G01840.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G01840 ID=NO01G01840|Name=NO01G01840|organism=Nannochloropsis oceanica|type=gene|length=1224bp
ATGCGCAGTCGCGCGGGGGGGATGACGCCCATGAGGGACGAGTTAGGGTT
GAACCAGGGAGGGGGAGGGTCAGGGATGGAGCAGCAGCAACAGTTAATGG
TGATGGGGGAGAAGAGGCGACAGAAGATGTTGAGGGCCCAGCTGGCCGAG
GGATTGCAAGGGCTTCCTGAGCCTCAGTACAACTACGAAATCTCGCTGCC
GGAGCTGGAGGAGGATGGGGAGGGAGGGAAGGAGGATGGGATGTCTGTAG
AGGAGGATGCGGCGGACCGCGATGCACGGGAAGCTGGAGAGAAGCGGGCG
AAGGAAGAGGCGGAGCTTGCGAGGAGGTCGACGGTGTTGAAGAGGGGCCT
GCCGAGGCCGATTGTTGTGGACCCCCAAGTGTTCCAGTCGCGGGCAAGAG
CGACAGCAGCCGCAGCTGCTGAGGGAGATGAGAAGGCAGCGGCGGACGCG
CTGGTCCAGAAGGAGTTATATGCTATGTTAGTGCATGACCAAGCCAAATA
CCCTTTCGTTCACGTGGCGCTGGGGAAGAAGAAGGGAGGGAAGAGTAGCG
GCAGCAGTGGTAGTAGTAATGGAGGAGGTGTGGATCTGCCTGCACTCCCT
TCTAAGCTTTTAGAGCAAGCCCGGGCGTTGGTCGAGGAAGAGGTGGCGGC
TTCGCGCAAGAATAAAAACGAAATGGTGAATGGGGGAGACGGAGGAAGAG
AGGGAGAGAGGGAGGATGACGACCCGGTGGTGGTGGAGGAGGCTTGGTTG
AAGGCCTATCATGACCTTGCTTATTTTCCCAACAGGCAGACGTTCGGTAG
GCTGACGGGTGCAAATAAGCAGGATCGCTTAGCGGCGCTTATCCATCAAT
TTGATTCGTTGCAGGCCCAGGGAGTGAAGGAGGGGAAGAAAGCGGGGAAA
TTGGAGGCGAGGCTGAACTTGGCCACGGGGGGATATGGGAAGAGAGCGTC
GAATTTAGTGCAAGGTGTGAGTGATGTGTTGAATCAGATTGATGAGATGC
GTTTGGAGGTGGGGTGTTTTCGACGGTTGGCTGCGATTGAGGAGTTGGCG
CTGAGGACACGCTTGGCCAAGGTCCAGGGAGAGGTGGAGGGATTGGAAGG
GAGGGAGGAGCAACTGCAGGTAAGTTATGTGGAGTTATTGGACGAGAGGG
ATGGATTGTTTGCGCTTGTTGGTGGAAGAGGGGAGGAAGGGATAAATGGT
AGAGAAGAGAGGATGGAGGAATAA
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protein sequence of NO01G01840.1

>NO01G01840.1-protein ID=NO01G01840.1-protein|Name=NO01G01840.1|organism=Nannochloropsis oceanica|type=polypeptide|length=408bp
MRSRAGGMTPMRDELGLNQGGGGSGMEQQQQLMVMGEKRRQKMLRAQLAE
GLQGLPEPQYNYEISLPELEEDGEGGKEDGMSVEEDAADRDAREAGEKRA
KEEAELARRSTVLKRGLPRPIVVDPQVFQSRARATAAAAAEGDEKAAADA
LVQKELYAMLVHDQAKYPFVHVALGKKKGGKSSGSSGSSNGGGVDLPALP
SKLLEQARALVEEEVAASRKNKNEMVNGGDGGREGEREDDDPVVVEEAWL
KAYHDLAYFPNRQTFGRLTGANKQDRLAALIHQFDSLQAQGVKEGKKAGK
LEARLNLATGGYGKRASNLVQGVSDVLNQIDEMRLEVGCFRRLAAIEELA
LRTRLAKVQGEVEGLEGREEQLQVSYVELLDERDGLFALVGGRGEEGING
REERMEE*
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Synonyms
Publications