NO01G00290, NO01G00290 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G00290 vs. NCBI_GenBank
Match: EWM28950.1 (hypothetical protein Naga_100389g2 [Nannochloropsis gaditana]) HSP 1 Score: 1019.6 bits (2635), Expect = 4.700e-294 Identity = 537/722 (74.38%), Postives = 589/722 (81.58%), Query Frame = 0 Query: 1 MAGIGSAIKEAEVLSAFQEINEDLQGKTEVVEKCLSILNHLGLSARDLANEWEAHSLNRGSDDSSQALLNLSSLGALEATLSKKVVGSAGTTATPGSSVRSGSSSSSSRRPLFDPSNLPSSEVAMRKRLSMSEDPPLAGKGGAGGVPGLMSPTPS-VPANKRRASSSGAGFMSPPSSASLPSITGTLSAAAGFTPGGISTDSPGQSTPQSAGGAVAYLNRTNAGQKAGAGEHNPALGVRGKFQPSKRFGGARCDLGTLPGTLNINLPTRYRYMYTTLEERARAQEKAMLRLQSDLVERALGEGGMELTPVGVPKQETVMVVGRVCCEAAEGRINKASVVLEGSRRDSGGFRVKLDLGELPAFALFPGQVVAVEGVNSSGFKMVVRRIIEGVPRPLLTSPVDKLKEFHHDGLYQGGGAVTVLVAAGPYTTTDSLEYEPLEDLLKVIAARQPDVAVLCGPFVDSNHPKVAAGETEIAGAGEEKESVDFESLFKMRVSLFLEGLYETNPTLATRIVLVPSLNDVFHDHVYPQPPLADRIPGGVPSPWFEEERLGDLGLPFASENDGADRRLYCLSNPSFFTINEVAVGITTNDILCHLSGDEVSFNTGNRLARLAAHLLQQQSFYPLFPPPADGQAQLDLRHSEHWRMPVTPDLLLLPSKLTPFAKDVGGALCINPGTLTKGGGGGTYAMLNIHPLPFDRLEKMAPGTEVPHEVARRTSVEIVRI 722 M G GSA+KE EVL+AFQEINEDL GK EVVEKCLSI++HLGLSARDLANEWEAH++NRGSDDSSQALLNLSSLG+LEATLSK+ G+ G T TP +S R S R FDPS LPS+E AMRKRLS+SEDP A K G +SP+PS P +R SS GAGFMSPP++A S T + + AYLNRTNAGQKA GTLPG L+INLP+RYR+MYTTLEERARAQEK +LRLQ DLV R L E E+TPVGVPKQETV V+GRVCCEA EGRINKASV+LEGSRRDSGGFRVKL+LG+LPAF+LFPGQVVAVEGVNSSGFKMVVRRIIEG+PRP LTSP K+ EF HD LYQGGGA+++LVAAGPYTTTDSLEYEPLEDLLKVIAARQPDVAVLCGPFVD+NHP+VA+GETEIAGAGEEKESVDFESLFKMRVSLFLEGLY+TNPTLA+RIVLVPSLNDVFHDH PPLADRIPGGVPSPWFEEERLGDLGLPFASE DGAD+RLYCLSNPSFFT+NEVAVG+TTNDILCHLSGDEVS+N GNRLARLAAHLLQQQSF+PLFPPPADGQAQLDLRH++H RMP+TPD+LLLPSKLTPF KDVGGALCINPGTLTKGGGGGTYAML+IHPLP +RLE+M+P TEV HEVARRT EIVRI Sbjct: 1 MTGTGSAVKEGEVLNAFQEINEDLHGKAEVVEKCLSIIHHLGLSARDLANEWEAHAMNRGSDDSSQALLNLSSLGSLEATLSKRGTGAGGATVTPAASTR------RSGRASFDPSTLPSTEQAMRKRLSLSEDPASAEKWPGAG--AFLSPSPSKAPVKRRPPSSDGAGFMSPPAAA---SFTPSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXAYLNRTNAGQKA----------------------------GTLPGALDINLPSRYRFMYTTLEERARAQEKMLLRLQDDLVARGL-EAEAEVTPVGVPKQETVTVIGRVCCEAPEGRINKASVLLEGSRRDSGGFRVKLELGQLPAFSLFPGQVVAVEGVNSSGFKMVVRRIIEGIPRPFLTSPAKKMLEFQHDSLYQGGGALSLLVAAGPYTTTDSLEYEPLEDLLKVIAARQPDVAVLCGPFVDANHPQVASGETEIAGAGEEKESVDFESLFKMRVSLFLEGLYDTNPTLASRIVLVPSLNDVFHDH----PPLADRIPGGVPSPWFEEERLGDLGLPFASEKDGADKRLYCLSNPSFFTVNEVAVGVTTNDILCHLSGDEVSYNPGNRLARLAAHLLQQQSFFPLFPPPADGQAQLDLRHADHLRMPITPDVLLLPSKLTPFVKDVGGALCINPGTLTKGGGGGTYAMLHIHPLPAERLERMSPETEVQHEVARRTHAEIVRI 678
BLAST of NO01G00290 vs. NCBI_GenBank
Match: CBN75382.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 520.4 bits (1339), Expect = 9.000e-144 Identity = 327/740 (44.19%), Postives = 416/740 (56.22%), Query Frame = 0 Query: 6 SAIKEAEVLSAFQEINEDLQGKTEVVEKCLSILNHLGLSARDLANEWEAHSLNRGSDDSSQALLNLSSLGALEATLSK-KVVGSAGTTATPGSSVRSGSSSSSSRRPLFDPSNLPSSEVAMRKRLSMSEDPPLAGKGGAGGVPGLMSPTPSVPANKRRASSSG--AGFMSPPSSASLPSITGTLSAAAGFTPGGISTDSPGQSTPQSAGGAVAYLNRTNAGQKAGAGEHNPALGVRG-KFQPSKRFGGARCDLGTLPGTLNINLPTRYRYMYTTLEERARAQEKAMLRLQSDLVERALGEGGMELTPVGVPKQETVMVVGRVCCEAAEGRINKASVVLEGSRRDSGGFRVKLDLGELPAFALFPGQVVAVEGVNSSGFKMVVRRIIEGVPRPLLTSPVDKLKEFHHDGLYQGGGAVTVLVAAGPYTTTDSLEYEPLEDLLKVIAARQPDVAVLCGPFVDSNHPKVAAGETEIAGAGEEKESVDFESLFKMRVSLFLEGLYETNPTLATRIVLVPSLNDVFHDHVYPQPPLADRIPGGVP--SPWFEEERLGDLGLPFASEN----------DGADRRLYCLSNPSFFTINEVAVGITTNDILCHLSGDEVSF--NTGNRLARLAAHLLQQQSFYPLFPPPADGQAQLDLRHSEHWRMPVTPDLLLLPSKLTPFAKDVGGALCINPGTLTKGGGGGTYAMLNIHPLPFDRLEKM------APGTEVPHEVARRTSVEIVRI 722 +A+ E+EV +F +I ED K + + KC+S+ LSA DLA+ WE+ ++N D S+ L +SS E ++K K S SED LA G + SP P + R G +SP S S P + Y +R NAGQK + +NPALG+RG PS R G RCD+ + G + P RYRYMYT LEERA A EK ++ LQ + ER G E+TPVGVP+QE V+ VGRVCCE+ EG+IN+AS++LEGSRRDS G R LDL EL +FALFPGQVVAV+GVN SG +MV R II+GVPRPL +S L H GG A+++ AAGP+TT+DSL YEPL DLL + A +PDV VL GPFVDS HPKVA+G+ I ESVDFE+LF++R+S L+ L+ + L T+ VLVPSL DVFH+ VYPQPP DR+ GGV + EER+ L +P +R++ NP++ +NEV +G+++ D L LSGDEVS NRLARLA HLLQQQSFYPLFPPPA AQLD+RH+ W MP TPD+LL+PS+L FA+ V G LC+NPG L+KG GGGTYA L +HP+P + L K P V H+VA+RT VEI RI Sbjct: 2 AAVTESEVAGSFSKIGEDPSDK-DFIGKCVSLCQRFSLSAGDLADHWESFAVNH---DGSR--LGMSSWAGFETEVAKSKAAASTPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTVTSED--LASSGTKRPMLPFSSPNPKARSKLARQDGEGGDGASLSPTSVQSPPDLV-----------------------------RAVYSSRKNAGQKTAS--YNPALGLRGLSVAPSPRQAGTRCDV-VVDGA--VGAPARYRYMYTPLEERAAALEKGLVALQGQM-ERKFGL--TEITPVGVPRQEQVVAVGRVCCESTEGKINRASILLEGSRRDSSGQRAHLDLRELQSFALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRAQHGAELGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDSEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDKLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDVPKTGARTTXXXXXXXXXXXQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQLDMRHAHRWGMPATPDVLLVPSRLAQFARQVQGCLCVNPGQLSKGTGGGTYAELAVHPMPQETLAKKQEELADKPDATVEHDVAKRTCVEIRRI 696
BLAST of NO01G00290 vs. NCBI_GenBank
Match: GAX21359.1 (DNA polymerase alpha subunit B [Fistulifera solaris]) HSP 1 Score: 374.8 bits (961), Expect = 6.100e-100 Identity = 207/473 (43.76%), Postives = 296/473 (62.58%), Query Frame = 0 Query: 260 TLNINLPTRYRYMYTTLEERARAQEKAMLRLQSDLVER-ALGEGGMELTP---VGVPKQETVMVVGRVCCEAAEGRINKASVVLEGSRRDSGGFRVKLDLGELPA-FALFPGQVVAVEGVNSSGFKMVVRRIIEGVPRPLLTSPVDKLKEFHHDGLYQGGGAVTVLVAAGPYTTTDSLEYEPLEDLLKVIAARQPDVAVLCGPFVDSNHPKVAAGETEIAGAGEEKESVDFESLFKMRVSLFLEGLYETNPTLATRIVLVPSLNDVFHDHVYPQPPLADRIPGGVPS--PWFEEERLGDLGLPFA-SENDGADRRLYCLSNPSFFTINEVAVGITTNDILCHLSGDEVSFN--TGNRLARLAAHLLQQQSFYPLFPPPADGQAQLDLRHSEHWRMPVTPDLLLLPSKLTPFAKDV-GGALCINPGTLTKGGGGGTYAMLNIHPLPFDRLEKMAPGTEVPHEVARRTSVEIVRI 722 T N NL YR ++TT E+RA A ++ ++ + L+E+ LG+ E+ P VG+P+ + V +GR+C A G+IN SV+LEGSR GG RV +DL L + +++FPGQ+VA+EG+N +G K+ V+R+ EG +TS V L+++H Q G V +L AAGP+TT+D+ +Y+P +DLL V+ QPDV +L GPFVD NHP V +G+T + V +E+ F ++SL LE L NP L T+ VLVPSL D + VYPQPP DR+ GG+ P + +G +GL + + + +R++C+ NP INEV +GIT+ D+L H+S DE + N G+RLAR++ HLLQQ+S+YPLF PPA G +D ++ E+W MP PDLLLLPSKL F++ V + +NPG LT+ GGTYA++ +HP D LE E+PH + RT V I RI Sbjct: 197 TNNNNLSQAYRSLFTTTEQRATALDQQLIHMGQHLMEKYQLGQSD-EVAPLEGVGIPRADQVCNIGRICNAAHYGKINATSVLLEGSRAAVGGARVAVDLSTLSSQYSVFPGQIVALEGMNPTGRKLQVQRLCEGAAAAPVTSRVRDLRQYHLQA--QQGQPVKLLTAAGPFTTSDNFQYQPWQDLLHVVQNEQPDVVILTGPFVDMNHPAVQSGQTALQDEDGNDVIVPYETFFMHKISLLLEELLTENPLLMTQFVLVPSLEDATAEWVYPQPPFQDRVSGGLQPNIPGADGITIGTMGLDYVETATELPAKRVHCVPNPCTLQINEVVIGITSTDVLFHMSADETNANLPPGSRLARISQHLLQQRSYYPLF-PPAPGM-NMDYQYMEYWSMPCQPDLLLLPSKLACFSRIVMDTTIVVNPGRLTRDTMGGTYAIIEVHPFAKDVLETADDDDELPHALPERTEVIIKRI 664
BLAST of NO01G00290 vs. NCBI_GenBank
Match: XP_002288990.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED94426.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 365.2 bits (936), Expect = 4.800e-97 Identity = 261/734 (35.56%), Postives = 382/734 (52.04%), Query Frame = 0 Query: 30 VVEKCLSILNHLGLSARDLANEWEAHSLNRGSDDSSQALLNLSSLGALEATLSKKVVGSAGTTATPGSSVRSGSSSSSSRRPLFDPSNLPSSEVAMRKRLSMSEDPPLAGKGGAGGVPGLMSPTPSVPANKRRASSSGAGFMSPPSSASLPSITGTLSAAAGFTPGGISTDSPGQSTPQSAGGAVAYLNRTNAGQKAGAGEHN--PALGVRGKFQPSKRFGGARCDLGTLPGTLNINLPTR---YRYMYTTLEERARAQEKAMLRLQSDLVER-------------------ALGEGGMELTPVGVPKQETVMVVGRVCCEAAEGRINKASVVLEGSRRDSGGFRVKLDLGEL-------PAFALFPGQVVAVEGVNSSGFKMVVRRIIEGVPRPLLTSPVDKLKEFHHDGLYQGGGAVTVLVAAGPYTTTDSLEYEPLEDLLKVIAARQPDVAVLCGPFVDSNHPKVAAGETEIAGAGEEKESVDFESLFKMRVSLFLEGLYETNPTLATRIVLVPSLNDVFHDHVYPQPPLADR-IPGGVPSPWFEEERLGDLGLPFAS-------ENDGADRRLYCLSNPSFFTINEVAVGITTNDILCHLSGDEVSFN--TGNRLARLAAHLLQQQSFYPLFPPPADGQAQLDLRHSEHWRMPVTPDLLLLPSKLTPFAKDV-GGALCINPGTLTKGGGGGTYAMLNIHPLPFDRLEKMAPGTEVPHEVARRTSVEIVRI 722 +V K + L L+ R LA WEAHSL R D +L+ + G ++ L+K+ S G A SSS S+R + + SS + R S P K GA TP +S + + PS G + + G G++ S Q TP +A A Y +RT G + N P C + P + + PT+ +R+M+T L RA+A E +L + + E+ + + TPVG+PKQ V+ VGR+C EA EGR+N+AS+ LEGSR+DS G R+ LDL L +++ FPGQ+VAVEG+NSSG M R+ EGVP P+ S +L ++++ Q G ++++ GP+TT D+LEY+PL D++ I+ QPDV ++CGPFVD P V GE I ++ V +E+LF+ + + LE +Y +P + T+ VLVPS D+ + VYPQPPL ++ + GV F +E G+LGL + + +R++C+SNP INE++VG+T++D+L H+S DE + N G RL R+A HL+QQ+S+YPLF PA A LDL S+ W MPV PD+L++PSKLT FA+ V + +NPG LTK GGTYA++++HP+ + LEK E+ H V R V+I RI Sbjct: 25 LVTKLTGLSTSLRLTPRQLAEAWEAHSLTRNVD-----VLDDVTFGGYQSALAKE-AESKGLIA---------SSSVDSKRNVV---VMQSSGLGKRTAPHSSVTPSPMAKRGA--------QTP--XXXXXXXXXXXXXXLSAVDNLTTPS--GKVPISPGMKHPGVA--SANQITP-TAKSAPKYQDRTGTGSLVTSYNPNSLPTAVEVNAQNADNATTQKTCTIQYHPSSTHPQPPTKSTPFRHMFTPLATRAKALESRILTMSDSICEKYNIKSEEEEMLKYEHVSAEVVDDNMACWTPVGIPKQGKVVCVGRICNEAHEGRLNRASIRLEGSRKDSSGSRIHLDLNSLVTNNDNNQSYSFFPGQIVAVEGINSSGRTMQASRLYEGVPPPVEKSTAKELIKYNYGPDGQNGMPLSIVSMCGPFTTKDNLEYDPLVDMVMKISEDQPDVVIMCGPFVDGRQPLVQGGEPTITDEDGNEKKVSYENLFQTKFAALLEEMYANDPDMKTQFVLVPSTEDMICESVYPQPPLVNQEVTSGVKK--FNDE-FGNLGLNYVEIAGRENIKTSERTKRVHCVSNPCTLKINELSVGVTSSDVLFHISSDETNANLPPGGRLTRIAQHLIQQRSYYPLF--PAAKGACLDLSRSDEWEMPVQPDILIVPSKLTTFARKVLDTTVVVNPGELTKNTTGGTYAVIDVHPMKKEALEK-GGDAEMEHGVQDRVRVDIKRI 719
BLAST of NO01G00290 vs. NCBI_GenBank
Match: GAX25887.1 (DNA polymerase alpha subunit B [Fistulifera solaris]) HSP 1 Score: 360.9 bits (925), Expect = 9.100e-96 Identity = 232/587 (39.52%), Postives = 334/587 (56.90%), Query Frame = 0 Query: 151 SPTPSVPANKRRASSSGAGFMSPPSSASLPSIT---GTLSAAAGFTPGGISTD-SPGQSTPQSAGGAVAYLNRTNAGQ---KAGAGEHNPALGVRGKFQPSKRFGGARCDLGTLPGTLNINLPTRYRYMYTTLEERARAQEKAMLRLQSDLVER-ALGEGGM--ELTPVGVPKQETVMVVGRVCCEAAEGRINKASVVLEGSRRDSGGFRVKLDLGELPAFALFPGQVVAVEGVNSSGFKMVVRRIIEGVPRPLLTSPVDKLKEFHHDGLYQGGGAVTVLVAAGPYTTTDSLEYEPLEDLLKVIAARQPDVAVLCGPFVDSNHPKVAAGETEIAGAGEEKESVDFESLFKMRVSLFLEGLYETNPTLATRIVLVPSLNDVFHDHVYPQPPLADRIPGGVPS--PWFEEERLGDLGLPFA-SENDGADRRLYCLSNPSFFTINEVAVGITTNDILCHLSGDEVSFN--TGNRLARLAAHLLQQQSFYPLFPPPADGQAQLDLRHSEHWRMPVTPDLLLLPSKLTPFAKDV-GGALCINPGTLTKGGGGGTYAMLNIHPLPFDRLEKMAPGTEVPHEVARRTSVEIVRI 722 S T +P ++ S GA + PP SLP +T L A P S+ SPG P S + Y RT AGQ A E A + P R +C + + + NL YR M+TT E+RA A + +L + L+++ LG+ L VG+P+ + V VGR+C A G+IN S +LEGSR + GG RV LD + +++FPGQ+VA+EG+N +G K+ V+R+ EG +T+ L+++H Q G + ++ AAGP+TT+D+ Y+PL+DLL V+ QPDV +L GPFVD +HP V +G+T + V +E+ F ++SL LE L +P L T+ VLVPSL D + VYPQPP DR+PGG+ P + +G +GL + + + +R++C+ NP INEV +GIT+ D+L H+S DE + N G+RLAR++ HLLQQ+S+YPLF PPA G +D ++ E W MP PD+L+LPSKL F++ V + +NPG LT+ GGTYA++ +HP D LE E+PH + RT VEI RI Sbjct: 74 SNTLDIPMSETNDSPRGA--VLPP--RSLPHVTPPAKRLQLAVATEPRRSSSSLSPG--PPVSLQPSDKYETRTGAGQIVSTFSAKEKRTA-----TYVPLSR---PKCAI--RKDSFSTNLSHTYRSMFTTTEQRATALNQQLLEMTKHLIDKYQLGQSDQVAPLEGVGIPRADQVCNVGRICNAAHAGKINATSCLLEGSRAE-GGVRVSLDWSGVSQYSVFPGQIVALEGMNPTGRKLQVQRLCEGAAAAPVTTRRSALRQYHLQA--QEGQPLKLVTAAGPFTTSDNFHYQPLQDLLHVVQQEQPDVVILTGPFVDLDHPAVQSGQTILQDEEGNDVIVPYETFFVHKISLLLEELLTEHPMLMTQFVLVPSLEDATAEWVYPQPPFQDRVPGGLQPNIPGADGITIGTMGLDYVETATELPCQRVHCVPNPCTLQINEVVIGITSTDVLFHMSADETNANLPPGSRLARISQHLLQQRSYYPLF-PPAPGM-NMDYQYMEQWSMPCQPDVLILPSKLACFSRTVMDTTIVVNPGRLTRDTVGGTYAIMEVHPFSKDVLEAADDDAELPHALPERTEVEIKRI 639
BLAST of NO01G00290 vs. NCBI_GenBank
Match: XP_005855569.1 (DNA polymerase alpha subunit B, partial [Nannochloropsis gaditana CCMP526] >EKU20784.1 DNA polymerase alpha subunit B, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 352.1 bits (902), Expect = 4.200e-93 Identity = 160/178 (89.89%), Postives = 173/178 (97.19%), Query Frame = 0 Query: 528 QPPLADRIPGGVPSPWFEEERLGDLGLPFASENDGADRRLYCLSNPSFFTINEVAVGITTNDILCHLSGDEVSFNTGNRLARLAAHLLQQQSFYPLFPPPADGQAQLDLRHSEHWRMPVTPDLLLLPSKLTPFAKDVGGALCINPGTLTKGGGGGTYAMLNIHPLPFDRLEKMAPGTE 706 QPPLADRIPGGVPSPWFEEERLGDLGLPFASE DGAD+RLYCLSNPSFFT+NEVAVG+TTNDILCHLSGDEVS+N GNRLARLAAHLLQQQSF+PLFPPPADGQAQLDLRH++HWRMP+TPD+LLLPSKLTPF KDVGGALCINPGTLTKGGGGGTYAML+IHPLP +RLE+M+P TE Sbjct: 34 QPPLADRIPGGVPSPWFEEERLGDLGLPFASEKDGADKRLYCLSNPSFFTVNEVAVGVTTNDILCHLSGDEVSYNPGNRLARLAAHLLQQQSFFPLFPPPADGQAQLDLRHADHWRMPITPDVLLLPSKLTPFVKDVGGALCINPGTLTKGGGGGTYAMLHIHPLPAERLERMSPETE 211
BLAST of NO01G00290 vs. NCBI_GenBank
Match: XP_013755577.1 (DNA polymerase alpha subunit B [Thecamonas trahens ATCC 50062] >KNC51993.1 DNA polymerase alpha subunit B [Thecamonas trahens ATCC 50062]) HSP 1 Score: 308.5 bits (789), Expect = 5.400e-80 Identity = 244/738 (33.06%), Postives = 344/738 (46.61%), Query Frame = 0 Query: 8 IKEAEVLSAFQEINEDLQGKTEVVEKCLSILNHLGLSARDLANEWEAHSLNRGSDDSSQALLNLSSLGALEATLSKKVVGSAGTTATPGSSVRSGSSSSSSRRPLFDPSNLPSSEVAMRKRLSMSEDPPLAGKGGAGGVPGLMSPTPSVPANKRRASSSGAGFMSPPSSASLPSITGTLSAAAGFTPGGISTDSPGQSTPQSAGGAVAYLNRTNAGQKAGAGEHNPALGVRGKFQPSKRFGGARCDLGTLPGTLNINLP-TRYRYMYTTLEERARAQEKAMLRLQSDLVERALGEGGMELTPVGVPKQETVMVVGRVCCEAAEGRINKASVVLEGSRRDSGGFRVKLDLGELPAFALFPGQVVAVEGVNSSGFKMVVRRIIEGVPRPLLTSPVDKLKEFHHDG------------------LYQGGGAVTVLVAAGPYTTTDSLEYEPLEDLLKVIAARQPDVAVLCGPFVDSNHPKVAAGETEIAGAGEEKESVDFESLFKMRVSLFLEGLYETNPTLATRIVLVPSLNDVFHDHVYPQPPLADRIPGGVPSPWFEEERLGDLGL-PFASENDGADRRLYCLSNPSFFTINEVAVGITTNDILCHLSGDEV----SFNTGNRLARLAAHLLQQQSFYPLFPPPADGQAQLDLRHSEHWRMPVTPDLLLLPSKLTPFAKDVGGALCINPGTLTKGGGGGTYAMLNIHPLPFDRLEKMAPGTEVPHEVARRTSVEIVRI 722 + ++ +++AF N DL+ + VV +CL+I GLSA +L N W+A+ N + L L L L A L T + ++S + +D SN +S PP A VP N+ + A SP + + + AG GG + +P S P S Y NR NAGQ NP + + R + TL + +RYMY + + E+ L +L+ A + L VP+QE + +GRVCC+ +EG++N SV+LEGS + GFRV LDL LP F+LFPGQ++ VEG+N +G M+ +I P T+ D L +HH G + G + ++VA GPYTT+D L++ PL DLL I A PDVA+L GPF++ HP + E +E LF+ R++ + E +ATR VLVPSL D+ HDHV+PQPPL DLGL P S LSNP F+INE+ V ++TND+L LS +E +R+ RL H++ Q+SFYP+FPPP +QLD S + TPD+L+L S L F KDV GA+ +NPG LT G GGT+A L +HP+P D + + E+ H VA R EI+RI Sbjct: 3 LTQSGLVAAFASANIDLEAEDGVVGRCLNICALHGLSADELLNSWDAYVCNHPEAHA----LTLDHLDILAAELQ-----------TKADRAQFKAASKPQQADDYDISN-----------ISALLPPPTTDMFAAYDVP-----------NEELKKTVWADARSPVKAKPVSRVAAMRGKDAGVAQGGEAGLAPAGS-PSS-----RYRNRQNAGQVVDV--LNPRVAPK----------DYRLETSAARVTLALEQEFHNFRYMYDKIGGKVTMLEERTRVLGDELLADAQLPDPLSL---AVPRQEPFVGLGRVCCD-SEGKLNDKSVMLEGSAKLCSGFRVPLDLSHLPEFSLFPGQIIGVEGLNLTGASMLAGQIYTPPSAPKPTTERDTLAIYHHYGGELVVGTNADGSDKTQEFEFMEGKPLAIIVAGGPYTTSDGLDFAPLRDLLARIVAEAPDVAILMGPFLNEGHPALEDPMLE----------ATYEELFEQRIAAVINAEME---GIATRFVLVPSLRDIQHDHVFPQPPLP-----------------ADLGLAPTVSR----------LSNPCVFSINEMVVAVSTNDVLMALSSEETFRVPQGAPSDRMTRLVRHIISQRSFYPVFPPPPG--SQLDFSQSRLLNLGATPDILILASDLRYFVKDVDGAVVVNPGRLTVGSAGGTFARLTVHPMPEDDIGE--GEEEIEHNVAARCRAEIIRI 637
BLAST of NO01G00290 vs. NCBI_GenBank
Match: OWZ18712.1 (DNA polymerase subunit alpha B [Phytophthora megakarya]) HSP 1 Score: 306.2 bits (783), Expect = 2.700e-79 Identity = 234/720 (32.50%), Postives = 355/720 (49.31%), Query Frame = 0 Query: 7 AIKEAEVLSAFQEINEDLQGKTEVVEKCLSILNHLGLSARDLANEWEAHSLNRGSDDSSQALLNLSSLGALEATLSKKVVGSAGTTATPGSSVRSGSSSSSSRRPLFDPSNLPSSEVAMRKRLSMSEDPPLAGKGGAGGVPGLMSPTPSVPANKRRASSSGAGFMSPPSSASLPSITGTLSAAAGFTPGGISTDSPGQSTPQSAGGAVAYLNRTNAGQKAGAGEHNPA-LGVRGKFQPSKRFGGARCDLGTLPGTLNINLPTRYRYMYTTLEERARAQEKAMLRLQSDLVERALGEGGMELTPVGVPKQETVMVVGRVCCEAAEGRINKASVVLEGSRRDSGGFRVKLDLGELPAFALFPGQVVAVEGV-NSSGFKMVVRRIIEGVPRPLLTSPVDKLKEFHHDGLYQGGGAVTVLVAAGPYTTTDSLEYEPLEDLLKVIAARQPDVAVLCGPFVDSNHPKVAAGETEIAGAGEEKESVDFESLFKMRVSLFLEGLYETNPTLATRIVLVPSLNDVFHDHVYPQPPLADRIPGGVPSPWFEEERLGDLGLPFASENDGADRRLYCLSNPSFFTINEVAVGITTNDILCHLSGDEV---SFNTGNRLARLAAHLLQQQSFYPLFPPPADGQAQLDLRHSEHWRMPVTPDLLLLPSKLTPFAKDVGGALCINPGTLTKGGGGGTYAMLNIHPLPFDRLEKMAPGTEVPHEVARRTSVEIVRI 722 ++ A + +AF N DL+ + C+SI LS+ D+A +W+A+S+N+ ++ A L A + L ++ + + P+ S+ + KR + S+D S+ + K F SP S + G S ++ +P G S + AG V+ N Q G G + + + V+ F PS+ NL YMYT L +RA A ++ ++ + + E+ E EL PVG P V VVGR+ CEAAEG++N + V +EGSR+ GG RV LDL +P F +FPG++VAVEGV + + V+R +E +P P TSP ++KE + G V VL A GP+TTT +++Y PL DLL++ ++PDV +L GPF+DS H G + G + FE +F +V L+ + + + +IV+VPSL D H+ VYPQPPL +++ LG P + +R++ +SNPS F+IN V G +T D++ LS +E+ NRL RL ++ Q+S+YP+FPPP++ +A +DLR+ + ++ TPD+LLLPS L F V ++CINPG L KG GGT+A + I PLP D++E A + H V RT VEI RI Sbjct: 2 SVDVAAIRAAFAACNLDLE--EDAATTCVSICAEFSLSSDDMAAQWDAYSMNQQLSGAADA----DGLVAFRSHLKQQ------------------QAKAKEPAPVIASQKRRQSKTPVLKREAESQD-----------------KLNSLYSMKSPEGKHARSFNSPSGSNKVQRKEGMFSPSSMQSPPGNSYEK-----RTDAGKTVSEFNAHLRKQIEGLGANTGSPVKVKQPF-PSR------------------NLAPNASYMYTPLFQRAIALDEQLVEYEELVKEKFKLE---ELKPVGDPSPAQVTVVGRIVCEAAEGKLNPSVVQIEGSRKTCGGQRVLLDLSAVPNFQIFPGKIVAVEGVFPDTRSPLAVKRFLEPIPAPPATSPPARIKEIQG----EHGKPVRVLTACGPFTTTSNVDYLPLNDLLQIAIDQKPDVLILVGPFIDSMHSMFQDGLVKYDGM-----MLSFEEIFLFKVMTLLDNVLSQDERI--QIVIVPSLRDANHEFVYPQPPLD------------KKKACEALGTPEHA------KRVHFMSNPSTFSINGVVFGTSTLDVVVQLSSNELYRAQNRDQNRLLRLCEQVVDQRSYYPMFPPPSNSEAPIDLRYMKQFQFEQTPDVLLLPSILNRFCGRVKDSICINPGQLCKGESGGTFAHITILPLPNDKIES-ATDDKCTHFVPDRTIVEIKRI 623
BLAST of NO01G00290 vs. NCBI_GenBank
Match: POM71594.1 (DNA polymerase subunit alpha B [Phytophthora palmivora var. palmivora]) HSP 1 Score: 306.2 bits (783), Expect = 2.700e-79 Identity = 239/723 (33.06%), Postives = 353/723 (48.82%), Query Frame = 0 Query: 7 AIKEAEVLSAFQEINEDLQGKTEVVEKCLSILNHLGLSARDLANEWEAHSLNRGSDDSSQALLNLSSLGALEATLSKKVVGSAGTTATPGSSVRSGSSSSSSRRPLFDPSNLPSSEVAMRKRLSMSEDPPLAGKGGAGGVPGLMSPTPSVPANKRRASSSGAGFMSPPSSASLPSITGTLSAAAGFTPGGISTDSPGQSTPQSAGGAVAYLNRTNAGQKAGAGEHNPA-LGVRGKFQPSKRFGGARCDLGTLPGTLNINLPTRYRYMYTTLEERARAQEKAMLRLQSDLVERALGEGGMELTPVGVPKQETVMVVGRVCCEAAEGRINKASVVLEGSRRDSGGFRVKLDLGELPAFALFPGQVVAVEGV-NSSGFKMVVRRIIEGVPRPLLTSPVDKLKEFHHDGLYQGGGAVTVLVAAGPYTTTDSLEYEPLEDLLKVIAARQPDVAVLCGPFVDSNHPKVAAGETEIAGAGEEKESVDFESLFKMRVSLFLEGLYETNPTLATRIVLVPSLNDVFHDHVYPQPPLADRIPGGVPSPWFEEERLGDLGLPFASENDGAD---RRLYCLSNPSFFTINEVAVGITTNDILCHLSGDEV---SFNTGNRLARLAAHLLQQQSFYPLFPPPADGQAQLDLRHSEHWRMPVTPDLLLLPSKLTPFAKDVGGALCINPGTLTKGGGGGTYAMLNIHPLPFDRLEKMAPGTEVPHEVARRTSVEIVRI 722 ++ A + +AF N DL+ + C+SI GLS+ D+A +W+A+S+N+ ++ A L A + L ++ + T S R S + +R + S+ + SM P K S F SP S + G S ++ +P G S + AG V+ N+ Q G G + + V+ F PS+ NL YMYT L +RA A ++ ++ + + E E EL PVG P V VVGR+ CEAAEG++N + V +EGSR+ GG RV LDL +P F +FPG++VA+EGV + V+R +E +P P TS ++KEF + G V VL A GP+TTT +++Y PL DLL++ ++PDV +L GPF+DS H G + G + FE +F +V L+ + + + +IV+VPSL D H++VYPQPPL D+ A E GA +R++ +SNPS F+IN V G + D++ LS +E+ NRL RL ++ Q+S+YP+FPPP+ +A +DLR+ + ++ TPD+LLLPS L F V ++CINPG L KG GGT+A + I PLP D++E A G + H V RT VEI RI Sbjct: 2 SVDVASIRAAFAACNLDLE--EDAASTCVSICTEFGLSSDDMAAQWDAYSMNQQLSGAADA----DGLVAFRSHLKQEQTKAKEPTPVASSQKRRHSKTPVVKREV-------ESQDKLESLYSMKS-----------------------PEGKHTRS-----FSSPAGSNKVQRKEGMFSPSSMQSPPGNSYEK-----RTDAGKTVSEFNKHLKTQIEGLGATTDSPVKVKAPF-PSR------------------NLAPNASYMYTPLFQRAIALDEQLVEYEELVKEMFKLE---ELKPVGDPSPAQVTVVGRIVCEAAEGKLNPSVVQIEGSRKTCGGQRVLLDLSGVPNFQIFPGKIVALEGVFPDTRSPFAVKRFLEPIPAPPATSSPARIKEFQN----AHGEPVRVLTACGPFTTTSNVDYLPLNDLLQIAIDQKPDVLILVGPFIDSMHSMFQDGLVKYDGM-----MLSFEEIFLFKVMTLLDNVLSQDERI--QIVIVPSLRDANHEYVYPQPPL-DKTK--------------------ACEAFGAQEYAKRVHFMSNPSTFSINGVVFGTSALDVVVQLSSNELHRAQNRDQNRLLRLCEQVVDQRSYYPMFPPPSSSEAPIDLRYMKQFQFEQTPDILLLPSILNRFCGRVKDSICINPGQLCKGESGGTFAHITILPLPNDKIES-ASGDKCAHFVPDRTIVEIKRI 623
BLAST of NO01G00290 vs. NCBI_GenBank
Match: POM60669.1 (DNA polymerase subunit alpha B [Phytophthora palmivora var. palmivora]) HSP 1 Score: 303.9 bits (777), Expect = 1.300e-78 Identity = 238/723 (32.92%), Postives = 353/723 (48.82%), Query Frame = 0 Query: 7 AIKEAEVLSAFQEINEDLQGKTEVVEKCLSILNHLGLSARDLANEWEAHSLNRGSDDSSQALLNLSSLGALEATLSKKVVGSAGTTATPGSSVRSGSSSSSSRRPLFDPSNLPSSEVAMRKRLSMSEDPPLAGKGGAGGVPGLMSPTPSVPANKRRASSSGAGFMSPPSSASLPSITGTLSAAAGFTPGGISTDSPGQSTPQSAGGAVAYLNRTNAGQKAGAGEHNPA-LGVRGKFQPSKRFGGARCDLGTLPGTLNINLPTRYRYMYTTLEERARAQEKAMLRLQSDLVERALGEGGMELTPVGVPKQETVMVVGRVCCEAAEGRINKASVVLEGSRRDSGGFRVKLDLGELPAFALFPGQVVAVEGV-NSSGFKMVVRRIIEGVPRPLLTSPVDKLKEFHHDGLYQGGGAVTVLVAAGPYTTTDSLEYEPLEDLLKVIAARQPDVAVLCGPFVDSNHPKVAAGETEIAGAGEEKESVDFESLFKMRVSLFLEGLYETNPTLATRIVLVPSLNDVFHDHVYPQPPLADRIPGGVPSPWFEEERLGDLGLPFASENDGAD---RRLYCLSNPSFFTINEVAVGITTNDILCHLSGDEV---SFNTGNRLARLAAHLLQQQSFYPLFPPPADGQAQLDLRHSEHWRMPVTPDLLLLPSKLTPFAKDVGGALCINPGTLTKGGGGGTYAMLNIHPLPFDRLEKMAPGTEVPHEVARRTSVEIVRI 722 ++ A + +AF N DL+ + C+SI GLS+ D+A +W+A+S+N+ ++ A L A + L ++ + T S R S + +R + S+ + SM P K S F SP S + G S ++ +P G S + AG V+ N+ Q G G + + V+ F PS+ NL YMYT L +RA A ++ ++ + + E+ E EL PVG P V VVGR+ CEAAEG++N + V +EGSR+ GG RV LDL +P F +FPG++VA+EGV + V+R +E +P P TS ++KE + G V VL A GP+TTT +++Y PL DLL++ ++PDV +L GPF+DS H G + G + FE +F +V L+ + + + +IV+VPSL D H++VYPQPPL D+ A E GA +R++ +SNPS F+IN V G + D++ LS +E+ NRL RL ++ Q+S+YP+FPPP+ +A +DLR+ + ++ TPD+LLLPS L F V ++CINPG L KG GGT+A + I PLP D++E A G + H V RT VEI RI Sbjct: 2 SVDVASIRAAFAACNLDLE--EDAASTCVSICTEFGLSSDDMAAQWDAYSMNQQLSGAADA----DGLVAFRSHLKQEQTKAKELTPVTSSQKRRHSKTPVVKREV-------ESQDKLESLYSMKS-----------------------PEGKHTRS-----FSSPAGSNKVQRKEGMFSPSSLQSPPGNSYEK-----RTDAGKTVSEFNKHLKTQIEGLGATTGSPVKVKAPF-PSR------------------NLAPNASYMYTPLFQRAIALDEQLVEYEELVKEKFKLE---ELKPVGDPSPAQVTVVGRIVCEAAEGKLNPSVVQIEGSRKTCGGQRVLLDLSGVPNFQIFPGKIVALEGVFPDTRSPFAVKRFLEPIPAPPATSSPARIKELQN----AHGEPVRVLTACGPFTTTSNVDYLPLNDLLQIAIDQKPDVLILVGPFIDSMHSMFQDGLVKYDGM-----MLSFEDIFLFKVMTLLDNVLSQDERI--QIVIVPSLRDANHEYVYPQPPL-DKTK--------------------ACEAFGAPEYAKRVHFMSNPSTFSINGVVFGTSALDVVVQLSSNELHRAQNRDQNRLLRLCEQVVDQRSYYPMFPPPSSSEAPIDLRYMKQFQFEQTPDILLLPSILNRFCGRVKDSICINPGQLCKGESGGTFAHITILPLPNDKIES-ASGDKCAHFVPDRTIVEIKRI 623 The following BLAST results are available for this feature:
BLAST of NO01G00290 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G00290 ID=NO01G00290|Name=NO01G00290|organism=Nannochloropsis oceanica|type=gene|length=6126bpback to top protein sequence of NO01G00290.1 >NO01G00290.1-protein ID=NO01G00290.1-protein|Name=NO01G00290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=722bpback to top protein sequence of NO01G00290.2 >NO01G00290.2-protein ID=NO01G00290.2-protein|Name=NO01G00290.2|organism=Nannochloropsis oceanica|type=polypeptide|length=712bpback to top Synonyms
Publications
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