jgi.p|Nanoce1779_2|575821, gene_2 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|575821
Unique Namegene_2
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_3:2442..6025 +

Link to JBrowse

Properties
Property NameValue
TranscriptId575907
ProteinId575821
Product nameDNA polymerase alpha/epsilon subunit B-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_3supercontigscaffold_3:2442..6025 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003887DNA-directed DNA polymerase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL047ncniL047Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G00290NO01G00290Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|575821mRNA_2-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|575821mRNA_2Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|575821

>mRNA_2-protein ID=mRNA_2-protein|Name=jgi.p|Nanoce1779_2|575821|organism=Nannochloropsis oceanica|type=polypeptide|length=582bp
MRKRLSMSEDPPLAGKGGAGGVPGLMSPTPSVPANKRRASSSGAGFMSPP
SSASLPSITGTLSAAAGFTPGGISTDSPGQSTPQSAGGAVAYLNRTNAGQ
KAGAGEHNPALGVRGKFQPSKRFGGARCDLGTLPGTLNINLPTRYRYMYT
TLEERARAQEKAMLRLQSDLVERALGEGGMELTPVGVPKQETVMVVGRVC
CEAAEGRINKASVVLEGSRRDSGGFRVKLDLGELPAFALFPGQVVAVEGV
NSSGFKMVVRRIIEGVPRPLLNSPVDKLKEFHHDGLYQGGGAVTVLVAAG
PYTTTDSLEYEPLEDLLKVIAARQPDVAVLCGPFVDSNHPKVAAGETEIA
GAGEEKESVDFESLFKMRVSLFLEGLYETNPTLATRIVLVPSLNDVFHDH
VYPQPPLADRIPGGVPSPWFEEERLGDLGLPFASENDGADRRLYCLSNPS
FFTINEVAVGITTNDILCHLSGDEVSFNTGNRLARLAAHLLQQQSFYPPL
SPTRRWTGPVLLLPSKLTPFAKDVGGALCINPGTLTKGGGGGTYAMLNIH
PLPFDRLEKMAPGTEVPHEVARRTSVEIVRI*
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Synonyms
Publications