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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr1 | genome | chr1:52465..58590 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO01G00290.1 vs.
Match: EWM28950.1 (hypothetical protein Naga_100389g2 [Nannochloropsis gaditana]) HSP 1 Score: 1051.6 bits (2718), Expect = 1.100e-303 Identity = 550/722 (76.18%), Postives = 603/722 (83.52%), Query Frame = 0
Query: 1 MAGIGSAIKEAEVLSAFQEINEDLQGKTEVVEKCLSILNHLGLSARDLANEWEAHSLNRGSDDSSQALLNLSSLGALEATLSKKVVGSAGTTATPGSSVRSGSSSSSSRRPLFDPSNLPSSEVAMRKRLSMSEDPPLAGKGGAGGVPGLMSPTPS-VPANKRRASSSGAGFMSPPSSASLPSITGTLSAAAGFTPGGISTDSPGQSTPQSAGGAVAYLNRTNAGQKAGAGEHNPALGVRGKFQPSKRFGGARCDLGTLPGTLNINLPTRYRYMYTTLEERARAQEKAMLRLQSDLVERALGEGGMELTPVGVPKQETVMVVGRVCCEAAEGRINKASVVLEGSRRDSGGFRVKLDLGELPAFALFPGQVVAVEGVNSSGFKMVVRRIIEGVPRPLLTSPVDKLKEFHHDGLYQGGGAVTVLVAAGPYTTTDSLEYEPLEDLLKVIAARQPDVAVLCGPFVDSNHPKVAAGETEIAGAGEEKESVDFESLFKMRVSLFLEGLYETNPTLATRIVLVPSLNDVFHDHVYPQPPLADRIPGGVPSPWFEEERLGDLGLPFASENDGADRRLYCLSNPSFFTINEVAVGITTNDILCHLSGDEVSFNTGNRLARLAAHLLQQQSFYPLFPPPADGQAQLDLRHSEHWRMPVTPDLLLLPSKLTPFAKDVGGALCINPGTLTKGGGGGTYAMLNIHPLPFDRLEKMAPGTEVPHEVARRTSVEIVRI 722
M G GSA+KE EVL+AFQEINEDL GK EVVEKCLSI++HLGLSARDLANEWEAH++NRGSDDSSQALLNLSSLG+LEATLSK+ G+ G T TP +S R S R FDPS LPS+E AMRKRLS+SEDP A K G +SP+PS P +R SS GAGFMSPP++AS + A TPGG+S+ S S P SAGGA AYLNRTNAGQKA GTLPG L+INLP+RYR+MYTTLEERARAQEK +LRLQ DLV R L E E+TPVGVPKQETV V+GRVCCEA EGRINKASV+LEGSRRDSGGFRVKL+LG+LPAF+LFPGQVVAVEGVNSSGFKMVVRRIIEG+PRP LTSP K+ EF HD LYQGGGA+++LVAAGPYTTTDSLEYEPLEDLLKVIAARQPDVAVLCGPFVD+NHP+VA+GETEIAGAGEEKESVDFESLFKMRVSLFLEGLY+TNPTLA+RIVLVPSLNDVFHDH PPLADRIPGGVPSPWFEEERLGDLGLPFASE DGAD+RLYCLSNPSFFT+NEVAVG+TTNDILCHLSGDEVS+N GNRLARLAAHLLQQQSF+PLFPPPADGQAQLDLRH++H RMP+TPD+LLLPSKLTPF KDVGGALCINPGTLTKGGGGGTYAML+IHPLP +RLE+M+P TEV HEVARRT EIVRI
Sbjct: 1 MTGTGSAVKEGEVLNAFQEINEDLHGKAEVVEKCLSIIHHLGLSARDLANEWEAHAMNRGSDDSSQALLNLSSLGSLEATLSKRGTGAGGATVTPAASTR------RSGRASFDPSTLPSTEQAMRKRLSLSEDPASAEKWPGAG--AFLSPSPSKAPVKRRPPSSDGAGFMSPPAAASFTPSAAASTPAPMLTPGGLSSTS---SPPLSAGGATAYLNRTNAGQKA----------------------------GTLPGALDINLPSRYRFMYTTLEERARAQEKMLLRLQDDLVARGL-EAEAEVTPVGVPKQETVTVIGRVCCEAPEGRINKASVLLEGSRRDSGGFRVKLELGQLPAFSLFPGQVVAVEGVNSSGFKMVVRRIIEGIPRPFLTSPAKKMLEFQHDSLYQGGGALSLLVAAGPYTTTDSLEYEPLEDLLKVIAARQPDVAVLCGPFVDANHPQVASGETEIAGAGEEKESVDFESLFKMRVSLFLEGLYDTNPTLASRIVLVPSLNDVFHDH----PPLADRIPGGVPSPWFEEERLGDLGLPFASEKDGADKRLYCLSNPSFFTVNEVAVGVTTNDILCHLSGDEVSYNPGNRLARLAAHLLQQQSFFPLFPPPADGQAQLDLRHADHLRMPITPDVLLLPSKLTPFVKDVGGALCINPGTLTKGGGGGTYAMLHIHPLPAERLERMSPETEVQHEVARRTHAEIVRI 678
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO01G00290.1 ID=NO01G00290.1|Name=NO01G00290.1|organism=Nannochloropsis oceanica|type=mRNA|length=4243bp
CCACCTTCGTCTTCCTCGTTTTTTCCTTGTTCCTTTTTTCTTCTTCTCTC
TTTGTTTTGTTGTTGTTTCTCATCTTCTGTTATAATTGTCGTTATCCTCG
TTCATCGTTTTCCTTTTATCGCCTCGTCGCTGTCGTATTTGTCACATACA
CACTGACCCAGGAACCCTGCTGCCGCCCCTCCCTCACTTCCTCCCTCCCT
CCCTCCATCAATCCCTCATCCAAGCTTCAGCAAATTCTTCAGATCTTTCG
TTGCGTCCTGCACTTCCACTACCGTCCGAATTCCTGCCCCTCCACCCTCT
CTCCCCTCCTCCTCCCCCTCCTCCCCCAGCGCCAAACCCGGCCCCTTAAA
GACGGCGGGCGGCATGGGAATGGTCTTGGGGTCAGGAGAGCGCTGGAACG
ATGACCAGGCGAACGTGCTCGGAGGGGCGGCTGCTACTGCTGCTGCGGTC
GCTGCTTGCGGCGGCGGTGGTGCCACTCCGCTATTCTTCCCTCCTCCTCC
ACCCCCTCCTCCTCCTTGTCTATTCCCGTGGTCCTTACCCCCCTTCCGTC
GACGTGAACTCTTGCTGTTGTTACCATTTCCCCCTTCTCCCCCTCCTGTT
CTTACAACACCACCAATTGCCTGCTCAACTTCCCCCCCCCACCTCCCCCT
CCTCCTCCGCCCCCAAAAAGCATCCCCTTCAAGGCCGCTTCCTTGGAATG
ATCCCTCCGTACCACCCCCGCCGACGGAGGAGTAGATGGCTGCGCGACCG
TAGCTTTATTACTCCCCGTTTTATTTGCTTGCGACAACATCGAAATGAGC
GCCTTGCCTCGTTCCTCGTTTCCTCCTCCTGCTCCTACTTCCCCCCGCCC
TATGCCCTTTCCCCCCTCTACTGGTCGCCCACCTCCCACGCGCGCCTCCA
GCTCACTGATCGAGATGGCCTTGATGCCTTTCGATGCAGCAGGAGCGACA
GGCTTCGACGCAGGGGGAGGTGGGGCTTGCTGAGATGGAGTAGGACGTGG
AGGGGGTTGGGCCTCACTTGCCGCAGCACTCGCCCTCCCGAGCATGCTCA
GCAGTGTCTCTCGAGCAGCCTCCTTCTCCTTTCCTTCCTCCATTTGTTTC
TTCCCCTTCTTCTCTCCCTTATTTGCTTTGGTGCTACCTTCCTCGGCGCC
GCTGCTCCGAGAAGTAGGCTGCACAGGGCGATCGCCCTCCCCTCCTCGCT
TCAGGAGGTCCGCTGGGGTCAGCAACTTGGCCAGTCCCGCTTTTTTTTCC
GCTGGCAGCGGCGGCGGTGGCACGGCATCTGTGGAAGGCGGCGTGGTGGT
AGCAGCCGGCACTGTGGGGATCTCAGCCTCGTCTCCTTCGGCCGGCGTAC
TGCCTTTGTTGCCCATGATGATTCGGGTCGTGTGCGTCTGTTGAGATGAT
GGCCGTGAGGGAGGGGGCAGGGGAATGGTGGGCGATGAGCGCCGGCTGTC
GAGATTACAGGGAGAAATGAATACATCTGTCCTAGTGGATGGTGGAGATA
GGGACGGGAAGGAGACTGCGGATGTGGTGTGGTATGTGTGCTCGACGTGT
GTGCTCTTTTCTATTTTTGGCGCGTACTCCGGGGAGCAAAATCAAGCGAG
TGCAGAAAGGCGCTCGATTGGCTAGCCTTCCAGCCCTACAACTATTCCTG
GCTCAAGCGTGGGCATGTAGTGTACGATAATTGCAAGTTTTTACATACTG
AGGGTGCGTGGATGCCAAGCAACTGCCTTGGCTTGTAGCCTCCTCCACAC
CCGCCTCAAGCACCTTCGCCAAAAGGTACATTCCATCCTCCCCACGCACA
GCACAACAAATTATATAACACACAAAACAGACACTCGCGGTCATACCAGC
ACCATGGCTGGTATCGGCAGCGCCATTAAAGAGGCTGAGGTCTTGAGTGC
CTTCCAAGAGATCAACGAGGACTTGCAGGGCAAGACCGAAGTGGTGGAGA
AATGTCTCTCCATCCTGAACCATCTCGGCCTCTCTGCGCGGGATCTGGCG
AACGAGTGGGAAGCCCACTCCCTAAACCGCGGCTCTGACGACAGCAGCCA
AGCCTTGCTCAACCTGTCCTCGCTCGGCGCCCTGGAAGCGACGCTCAGCA
AGAAGGTCGTTGGGTCTGCGGGAACGACCGCCACGCCTGGCTCCTCTGTT
CGCAGCGGCAGCAGCAGCAGCAGCAGTCGCCGCCCTCTGTTCGATCCCTC
TAATCTGCCTTCGTCTGAGGTGGCCATGCGCAAGCGTTTGAGTATGTCCG
AGGACCCCCCCTTGGCTGGGAAAGGCGGGGCAGGAGGAGTACCGGGGCTG
ATGTCCCCCACTCCTTCTGTCCCAGCCAACAAACGACGAGCCTCGTCCAG
CGGCGCCGGCTTCATGTCGCCTCCTAGTTCGGCCTCCCTCCCATCCATCA
CCGGGACCTTGTCGGCGGCTGCCGGCTTCACACCCGGGGGCATTTCTACC
GACTCGCCAGGGCAGTCTACGCCACAATCGGCTGGCGGGGCAGTGGCCTA
CTTGAATCGGACCAACGCAGGGCAGAAAGCAGGCGCCGGTGAGCATAACC
CCGCGCTGGGTGTACGAGGCAAGTTCCAGCCCTCCAAACGATTCGGCGGT
GCACGCTGCGATCTAGGCACTCTACCTGGCACCCTGAACATCAACCTGCC
CACTCGGTACCGGTACATGTACACGACGCTGGAGGAACGGGCTCGAGCCC
AGGAGAAGGCCATGCTGCGCTTGCAGAGCGATCTGGTGGAGCGAGCGCTG
GGGGAAGGAGGGATGGAGTTGACGCCGGTGGGGGTTCCGAAGCAGGAGAC
GGTAATGGTGGTGGGCCGGGTGTGCTGCGAGGCTGCGGAGGGGAGGATCA
ACAAGGCTAGTGTCGTCTTGGAAGGTTCCCGGCGTGACTCGGGCGGGTTC
CGCGTGAAGCTGGATCTAGGTGAATTACCCGCTTTCGCCCTCTTTCCCGG
CCAGGTGGTGGCCGTGGAGGGTGTCAACAGCAGTGGCTTCAAGATGGTGG
TCCGGCGCATCATCGAGGGCGTCCCTCGACCCCTCCTGACCTCGCCCGTT
GACAAACTGAAGGAGTTTCACCACGACGGCCTCTACCAAGGGGGGGGCGC
CGTGACGGTGCTGGTGGCCGCGGGCCCCTACACCACCACGGACTCGCTCG
AGTACGAGCCTCTGGAAGATCTCTTGAAGGTGATCGCAGCGCGGCAACCG
GATGTGGCGGTGTTGTGTGGGCCGTTCGTCGACTCCAACCACCCCAAGGT
GGCGGCAGGCGAGACCGAGATCGCGGGCGCGGGCGAAGAGAAGGAGAGCG
TGGACTTCGAATCGCTTTTCAAGATGCGAGTCTCACTCTTCCTGGAGGGG
CTGTACGAGACCAACCCCACTCTGGCTACGCGCATCGTCCTCGTGCCCTC
CCTCAATGACGTCTTCCATGATCATGTCTATCCGCAGCCTCCCCTGGCCG
ACCGTATTCCCGGCGGCGTACCTTCCCCTTGGTTCGAAGAGGAGCGACTG
GGCGACCTCGGTCTACCATTCGCAAGTGAAAACGACGGGGCGGACAGGCG
GCTCTATTGCTTGAGCAACCCGTCATTCTTTACCATCAACGAAGTCGCCG
TCGGCATCACCACCAACGACATCCTCTGCCACTTGTCGGGAGATGAGGTT
TCCTTCAACACCGGGAACCGCCTCGCACGCCTGGCCGCCCACCTTTTGCA
ACAACAGAGTTTCTACCCCCTCTTTCCCCCACCCGCCGATGGACAGGCCC
AGCTGGACCTCCGTCACTCCGAGCATTGGCGCATGCCTGTCACTCCCGAT
CTCCTCCTCCTCCCCTCCAAGCTCACCCCATTCGCCAAAGACGTAGGTGG
CGCGCTTTGCATCAATCCCGGCACCCTCACAAAGGGCGGAGGCGGAGGCA
CGTACGCGATGCTTAACATCCATCCCTTGCCTTTTGACCGTTTGGAGAAA
ATGGCACCCGGGACTGAGGTACCACATGAGGTGGCAAGGCGGACGAGCGT
GGAGATCGTGCGTATTTAGAAAAGCGGACCTTCGCGACGTCGACAAGAAT
TATTATAATAGGGTATGCGACCATGGAAAAAATGGCCAGATTATGAGGAA
AGGTTTCGGCAGGGTCTGAGAAACAGGGCTTGTGTGTGTTTCTGAGCATG
ATGTTCATGAAACCAAATAAGGGGATGAGGAGATCACAGAGCCTGCATGG
GAATGCGTCGAAGTTAAAAAAATACTTCAAAGAATAATGAGCA back to topprotein sequence of NO01G00290.1 >NO01G00290.1-protein ID=NO01G00290.1-protein|Name=NO01G00290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=722bp
MAGIGSAIKEAEVLSAFQEINEDLQGKTEVVEKCLSILNHLGLSARDLAN
EWEAHSLNRGSDDSSQALLNLSSLGALEATLSKKVVGSAGTTATPGSSVR
SGSSSSSSRRPLFDPSNLPSSEVAMRKRLSMSEDPPLAGKGGAGGVPGLM
SPTPSVPANKRRASSSGAGFMSPPSSASLPSITGTLSAAAGFTPGGISTD
SPGQSTPQSAGGAVAYLNRTNAGQKAGAGEHNPALGVRGKFQPSKRFGGA
RCDLGTLPGTLNINLPTRYRYMYTTLEERARAQEKAMLRLQSDLVERALG
EGGMELTPVGVPKQETVMVVGRVCCEAAEGRINKASVVLEGSRRDSGGFR
VKLDLGELPAFALFPGQVVAVEGVNSSGFKMVVRRIIEGVPRPLLTSPVD
KLKEFHHDGLYQGGGAVTVLVAAGPYTTTDSLEYEPLEDLLKVIAARQPD
VAVLCGPFVDSNHPKVAAGETEIAGAGEEKESVDFESLFKMRVSLFLEGL
YETNPTLATRIVLVPSLNDVFHDHVYPQPPLADRIPGGVPSPWFEEERLG
DLGLPFASENDGADRRLYCLSNPSFFTINEVAVGITTNDILCHLSGDEVS
FNTGNRLARLAAHLLQQQSFYPLFPPPADGQAQLDLRHSEHWRMPVTPDL
LLLPSKLTPFAKDVGGALCINPGTLTKGGGGGTYAMLNIHPLPFDRLEKM
APGTEVPHEVARRTSVEIVRI* back to topmRNA from alignment at chr1:52465..58590+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO01G00290.1 ID=NO01G00290.1|Name=NO01G00290.1|organism=Nannochloropsis oceanica|type=mRNA|length=6126bp|location=Sequence derived from alignment at chr1:52465..58590+ (Nannochloropsis oceanica)
CCACCTTCGTCTTCCTCGTTTTTTCCTTGTTCCTTTTTTCTTCTTCTCTC
TTTGTTTTGTTGTTGTTTCTCATCTTCTGTTATAATTGTCGTTATCCTCG
TTCATCGTTTTCCTTTTATCGCCTCGTCGCTGTCGTATTTGTCACATACA
CACTGACCCAGGAACCCTGCTGCCGCCCCTCCCTCACTTCCTCCCTCCCT
CCCTCCATCAATCCCTCATCCAAGCTTCAGCAAATTCTTCAGATCTTTCG
TTGCGTCCTGCACTTCCACTACCGTCCGAATTCCTGCCCCTCCACCCTCT
CTCCCCTCCTCCTCCCCCTCCTCCCCCAGCGCCAAACCCGGCCCCTTAAA
GACGGCGGGCGGCATGGGAATGGTCTTGGGGTCAGGAGAGCGCTGGAACG
ATGACCAGGCGAACGTGCTCGGAGGGGCGGCTGCTACTGCTGCTGCGGTC
GCTGCTTGCGGCGGCGGTGGTGCCACTCCGCTATTCTTCCCTCCTCCTCC
ACCCCCTCCTCCTCCTTGTCTATTCCCGTGGTCCTTACCCCCCTTCCGTC
GACGTGAACTCTTGCTGTTGTTACCATTTCCCCCTTCTCCCCCTCCTGTT
CTTACAACACCACCAATTGCCTGCTCAACTTCCCCCCCCCACCTCCCCCT
CCTCCTCCGCCCCCAAAAAGCATCCCCTTCAAGGCCGCTTCCTTGGAATG
ATCCCTCCGTACCACCCCCGCCGACGGAGGAGTAGATGGCTGCGCGACCG
TAGCTTTATTACTCCCCGTTTTATTTGCTTGCGACAACATCGAAATGAGC
GCCTTGCCTCGTTCCTCGTTTCCTCCTCCTGCTCCTACTTCCCCCCGCCC
TATGCCCTTTCCCCCCTCTACTGGTCGCCCACCTCCCACGCGCGCCTCCA
GCTCACTGATCGAGATGGCCTTGATGCCTTTCGATGCAGCAGGAGCGACA
GGCTTCGACGCAGGGGGAGGTGGGGCTTGCTGAGATGGAGTAGGACGTGG
AGGGGGTTGGGCCTCACTTGCCGCAGCACTCGCCCTCCCGAGCATGCTCA
GCAGTGTCTCTCGAGCAGCCTCCTTCTCCTTTCCTTCCTCCATTTGTTTC
TTCCCCTTCTTCTCTCCCTTATTTGCTTTGGTGCTACCTTCCTCGGCGCC
GCTGCTCCGAGAAGTAGGCTGCACAGGGCGATCGCCCTCCCCTCCTCGCT
TCAGGAGGTCCGCTGGGGTCAGCAACTTGGCCAGTCCCGCTTTTTTTTCC
GCTGGCAGCGGCGGCGGTGGCACGGCATCTGTGGAAGGCGGCGTGGTGGT
AGCAGCCGGCACTGTGGGGATCTCAGCCTCGTCTCCTTCGGCCGGCGTAC
TGCCTTTGTTGCCCATGATGATTCGGGTCGTGTGCGTCTGTTGAGATGAT
GGCCGTGAGGGAGGGGGCAGGGGAATGGTGGGCGATGAGCGCCGGCTGTC
GAGATTACAGGGAGAAATGAATACATCTGTCCTAGTGGATGGTGGAGATA
GGGACGGGAAGGAGACTGCGGATGTGGTGTGGTATGTGTGCTCGACGTGT
GTGCTCTTTTCTATTTTTGGCGCGTACTCCGGGGAGCAAAATCAAGCGAG
TGCAGAAAGGCGCTCGATTGGCTAGCCTTCCAGCCCTACAACTATTCCTG
GCTCAAGCGTGGGCATGTAGTGTACGATAATTGCAAGTTTTTACATACTG
AGGGTGCGTGGATGCCAAGCAACTGCCTTGGCTTGTAGCCTCCTCCACAC
CCGCCTCAAGCACCTTCGCCAAAAGGTACATTCCATCCTCCCCACGCACA
GCACAACAAATTATATAACACACAAAACAGACACTCGCGGTCATACCAGC
ACCATGGCTGGTATCGGCAGCGCCATTAAAGAGGCTGAGGTCTTGAGTGC
CTTCCAAGAGATCAACGAGGACTTGCAGGGCAAGACCGAAGTGGTGGAGA
AATGTGAGTGTCGGCGGGGTGAGAGGGGAGGGAGGGAAAGGGGAGGGAAA
GTAGGGTAAGGAGGAGGCGAAGAAACAGAGCATATGCACTGGGGCGACAC
TATCAGATATGACATGTGCGCTTCCGCCTGCCACAGATTCCATGAGTGGC
TCCAAGCCTGTCTTTCACTTCCTCCTTCCCGCCCTTCGGCCTTCCCAGTT
TGAGAAGAGGGCGGGGAAAGAAAGACACGGAAAGGGACATATCTGTGATA
CTCCGCGATAATTTGTATGACCGACTGCAACGCGGTCTATATATTTATGC
CCCCGCTGTCCTATATGTCCAATCGACGCCCCTCTTTGCGCCTCCCTCTC
CCCTCCTTTCCCCACCAATCCAGGTCTCTCCATCCTGAACCATCTCGGCC
TCTCTGCGCGGGATCTGGCGAACGAGTGGGAAGCCCACTCCCTAAACCGC
GGCTCTGACGACAGCAGCCAAGCCTTGCTCAACCTGTCCTCGCTCGGCGC
CCTGGAAGCGACGCTCAGCAAGAAGGTCGTTGGGTCTGCGGGAACGACCG
CCACGCCTGGCTCCTCTGTTCGCAGCGGCAGCAGCAGCAGCAGCAGTCGC
CGCCCTCTGTTCGATCCCTCTAATCTGCCTTCGTCTGAGGTGGCCATGCG
CAAGCGTTTGAGTATGTCCGAGGACCCCCCCTTGGCTGGGAAAGGCGGGG
CAGGAGGAGTACCGGGGCTGATGTCCCCCACTCCTTCTGTCCCAGCCAAC
AAACGACGAGCCTCGTCCAGCGGCGCCGGCTTCATGTCGCCTCCTAGTTC
GGCCTCCCTCCCATCCATCACCGGGACCTTGTCGGCGGCTGCCGGCTTCA
CACCCGGGGGCATTTCTACCGACTCGCCAGGGCAGTCTACGCCACAATCG
GCTGGCGGGGCAGTGGCCTACTTGAATCGGACCAACGCAGGGCAGAAAGC
AGGTGTGTACGCGTGTGTGTGGGAGGAAAGAAAGAAAGAGAGAGAGAAGA
TAAAGGAGGAAGGGAGAATCATGCCATGATCCTTGTCTTCCCATCGCATG
TCTAATCGCTCCTTCCCTCTCCGCCTTCGCCCCAGGCGCCGGTGAGCATA
ACCCCGCGCTGGGTGTACGAGGCAAGTTCCAGCCCTCCAAACGATTCGGC
GGTGCACGCTGCGATCTAGGTATGTGCCTCTTTTGCTATCTTTCTATGAC
CCCTCGTTCCCTTCACTTCCTCTCACCCTGCCCTCCTCCCTCCCTCCCTC
CCCCGTCTCCTTTCCTCAGGCACTCTACCTGGCACCCTGAACATCAACCT
GCCCACTCGGTACCGGTACATGTACACGACGCTGGAGGAACGGGCTCGAG
CCCAGGAGAAGGCCATGCTGCGCTTGCAGAGCGATCTGGTGGAGCGAGCG
CTGGGGGAAGGAGGGATGGAGTTGACGCCGGTGGGGGTTCCGAAGCAGGA
GACGGTAATGGTGGTGGGCCGGGTGTGCTGCGAGGCTGCGGAGGGGAGGA
TCAACAAGGCTAGTGTCGTCTTGGAAGGTAGGGAAACGTGGATTCCCTTA
CAATTTCAGGTCTCTTTCTCATCTTCCATTCTCTCGGGAGCCCGAGCAAA
CCTGAATGAAACATGAACTTCTTCATCCACCCACATACATCCCTTTTCCT
CTCCTCCCCTTCCTCCCTCTCTTCCTCCTCAAGGTTCCCGGCGTGACTCG
GGCGGGTTCCGCGTGAAGCTGGATCTAGGTGAATTACCCGCTTTCGCCCT
CTTTCCCGGCCAGGTGGTGGCCGTGGAGGGTGTCAACAGCAGTGGTGCGC
CTCGAGCCCTCCCTCCCTCGAGCCCTCCCTCCCTCTCACCTTCCTTTTCA
TTTTTACTTTTCTCATTTTATGTTTTTTTTTGTGGGTTCAAAAGCAAGTT
CGTGCTTTCTTTCTTGCTTCGTGTAATATTATAGCTATTGGAGTGCGCAG
CATCTATCAAAGTCCTCTCCTTCCCTGCCCTCCCTTCTCCCTCTCTCCTC
TCTCTCCCTCCCTTCCCCCCAAATAGGCTTCAAGATGGTGGTCCGGCGCA
TCATCGAGGGCGTCCCTCGACCCCTCCTGACCTCGCCCGTTGACAAACTG
AAGGAGTTTCACCACGACGGCCTCTACCAAGGGGGGGGCGCCGTGACGGT
GCTGGTGGCCGCGGGCCCCTACACCACCACGGACTCGCTCGAGTACGAGC
CTCTGGAAGATCTCTTGAAGGTACGGACGAGCTGTTGCCGATCGTCCATC
TCTCCCTCCTTCCCTCCCTTCCTTCCTCCGTGCATTCATGACCCCTTCAA
CTCTTTCCCTCCTATCGTATTTTGCCCCCGCTTGCTTTTCTCCCTCCCTT
CCTCCCTGTCAAGGTGATCGCAGCGCGGCAACCGGATGTGGCGGTGTTGT
GTGGGCCGTTCGTCGACTCCAACCACCCCAAGGTAAAAGTACAGAGAAGG
AAGGTGCCAGGAGGAAAGGGAGGAGCACCAGAAGGAGATCGCGTTAACGG
CACACAAACACTCACTCACACCCATTATTTCCTCCCTTTCTTCCTGCCTC
CTTTCCTTGCCCAACGCAGGTGGCGGCAGGCGAGACCGAGATCGCGGGCG
CGGGCGAAGAGAAGGAGAGCGTGGACTTCGAATCGCTTTTCAAGATGCGA
GTCTCACTCTTCCTGGAGGGGCTGTACGAGACCAACCCCACTCTGGCTAC
GCGCATCGTCCTCGTGCCCTCCCTCAATGACGTCTTCCATGATCATGTCT
ATCCGCAGGTACTGTGCTCTTCCCTCTTCCTCCCTCCAGTTGTATTCTCT
CTCATGCTCTTCCTCGCTAATTCTACGTTCTTTTGATGCTCCCTGATCCC
TCCTTTCCTCCAGCCTCCCCTGGCCGACCGTATTCCCGGCGGCGTACCTT
CCCCTTGGTTCGAAGAGGAGCGACTGGGCGACCTCGGTCTACCATTCGCA
AGTGGTACGTACAGGGGAAGGAGGGGCGGAGTGGAGCAATATAGAAAGCA
ACTGGCTTGCCATATGATATGTTCTCACAAAAATGATTCTCCCTTCCAAT
CTTCCTACCCTATCCTCAGAAAACGACGGGGCGGACAGGCGGCTCTATTG
CTTGAGCAACCCGTCATTCTTTACCATCAACGAAGTCGCCGTCGGCATCA
CCACCAACGACATCCTCTGCCACTTGTCGGGAGATGAGGTGCGTACTCTC
GATCCCTCGCGCCCTCCACGTCGCTGACACGTCTCTGATTTTGCTATCTT
GCTTTCTCATGGGCTCATTCAGGTTTCCTTCAACACCGGGAACCGCCTCG
CACGCCTGGCCGCCCACCTTTTGCAACAACAGAGTTTCTACCCCCTCTTT
CCCCCACCCGCCGATGGACAGGCCCAGGTATGCATTCCTTGATTTTTCTC
TTTCTTCCCGCCCCGGCTAAAATGTAGCACGATTCTCATCACTCCTCTCC
TTCACATCCTTTTACAACAGCTGGACCTCCGTCACTCCGAGCATTGGCGC
ATGCCTGTCACTCCCGATCGTAAGTACTTTTGGCTGTGTCCGGTCCTCTA
TTTTGTTCAACTCTTCAACTTACTCATTCACCTCCTCCTATCCCACCCCT
TATTTTCTCCAAATAGTCCTCCTCCTCCCCTCCAAGCTCACCCCATTCGC
CAAAGACGTAGGTGGCGCGCTTTGCATCAATCCCGGCACCCTCACAAAGG
GCGGAGGCGGAGGCACGTACGCGATGCTTAACATCCATCCCTTGCCTTTT
GACCGTTTGGAGAAAATGGCACCCGGGACTGAGGTAAGAAAGAAAGGGCA
GTAGGAAGAATGCTGCACAGTGCATTACGGTAGATATGCTGTTGCATTTT
GGAGCGCAAATGTACTGACTTTCGCGTATGTTACTTCCCTCTTTGATAAA
GGTACCACATGAGGTGGCAAGGCGGACGAGCGTGGAGATCGTGCGTATTT
AGAAAAGCGGACCTTCGCGACGTCGACAAGAATTATTATAATAGGGTATG
CGACCATGGAAAAAATGGCCAGATTATGAGGAAAGGTTTCGGCAGGGTCT
GAGAAACAGGGCTTGTGTGTGTTTCTGAGCATGATGTTCATGAAACCAAA
TAAGGGGATGAGGAGATCACAGAGCCTGCATGGGAATGCGTCGAAGTTAA
AAAAATACTTCAAAGAATAATGAGCA back to topCoding sequence (CDS) from alignment at chr1:52465..58590+ >NO01G00290.1 ID=NO01G00290.1|Name=NO01G00290.1|organism=Nannochloropsis oceanica|type=CDS|length=2166bp|location=Sequence derived from alignment at chr1:52465..58590+ (Nannochloropsis oceanica)
ATGGCTGGTATCGGCAGCGCCATTAAAGAGGCTGAGGTCTTGAGTGCCTT
CCAAGAGATCAACGAGGACTTGCAGGGCAAGACCGAAGTGGTGGAGAAAT
GTCTCTCCATCCTGAACCATCTCGGCCTCTCTGCGCGGGATCTGGCGAAC
GAGTGGGAAGCCCACTCCCTAAACCGCGGCTCTGACGACAGCAGCCAAGC
CTTGCTCAACCTGTCCTCGCTCGGCGCCCTGGAAGCGACGCTCAGCAAGA
AGGTCGTTGGGTCTGCGGGAACGACCGCCACGCCTGGCTCCTCTGTTCGC
AGCGGCAGCAGCAGCAGCAGCAGTCGCCGCCCTCTGTTCGATCCCTCTAA
TCTGCCTTCGTCTGAGGTGGCCATGCGCAAGCGTTTGAGTATGTCCGAGG
ACCCCCCCTTGGCTGGGAAAGGCGGGGCAGGAGGAGTACCGGGGCTGATG
TCCCCCACTCCTTCTGTCCCAGCCAACAAACGACGAGCCTCGTCCAGCGG
CGCCGGCTTCATGTCGCCTCCTAGTTCGGCCTCCCTCCCATCCATCACCG
GGACCTTGTCGGCGGCTGCCGGCTTCACACCCGGGGGCATTTCTACCGAC
TCGCCAGGGCAGTCTACGCCACAATCGGCTGGCGGGGCAGTGGCCTACTT
GAATCGGACCAACGCAGGGCAGAAAGCAGGCGCCGGTGAGCATAACCCCG
CGCTGGGTGTACGAGGCAAGTTCCAGCCCTCCAAACGATTCGGCGGTGCA
CGCTGCGATCTAGGCACTCTACCTGGCACCCTGAACATCAACCTGCCCAC
TCGGTACCGGTACATGTACACGACGCTGGAGGAACGGGCTCGAGCCCAGG
AGAAGGCCATGCTGCGCTTGCAGAGCGATCTGGTGGAGCGAGCGCTGGGG
GAAGGAGGGATGGAGTTGACGCCGGTGGGGGTTCCGAAGCAGGAGACGGT
AATGGTGGTGGGCCGGGTGTGCTGCGAGGCTGCGGAGGGGAGGATCAACA
AGGCTAGTGTCGTCTTGGAAGGTTCCCGGCGTGACTCGGGCGGGTTCCGC
GTGAAGCTGGATCTAGGTGAATTACCCGCTTTCGCCCTCTTTCCCGGCCA
GGTGGTGGCCGTGGAGGGTGTCAACAGCAGTGGCTTCAAGATGGTGGTCC
GGCGCATCATCGAGGGCGTCCCTCGACCCCTCCTGACCTCGCCCGTTGAC
AAACTGAAGGAGTTTCACCACGACGGCCTCTACCAAGGGGGGGGCGCCGT
GACGGTGCTGGTGGCCGCGGGCCCCTACACCACCACGGACTCGCTCGAGT
ACGAGCCTCTGGAAGATCTCTTGAAGGTGATCGCAGCGCGGCAACCGGAT
GTGGCGGTGTTGTGTGGGCCGTTCGTCGACTCCAACCACCCCAAGGTGGC
GGCAGGCGAGACCGAGATCGCGGGCGCGGGCGAAGAGAAGGAGAGCGTGG
ACTTCGAATCGCTTTTCAAGATGCGAGTCTCACTCTTCCTGGAGGGGCTG
TACGAGACCAACCCCACTCTGGCTACGCGCATCGTCCTCGTGCCCTCCCT
CAATGACGTCTTCCATGATCATGTCTATCCGCAGCCTCCCCTGGCCGACC
GTATTCCCGGCGGCGTACCTTCCCCTTGGTTCGAAGAGGAGCGACTGGGC
GACCTCGGTCTACCATTCGCAAGTGAAAACGACGGGGCGGACAGGCGGCT
CTATTGCTTGAGCAACCCGTCATTCTTTACCATCAACGAAGTCGCCGTCG
GCATCACCACCAACGACATCCTCTGCCACTTGTCGGGAGATGAGGTTTCC
TTCAACACCGGGAACCGCCTCGCACGCCTGGCCGCCCACCTTTTGCAACA
ACAGAGTTTCTACCCCCTCTTTCCCCCACCCGCCGATGGACAGGCCCAGC
TGGACCTCCGTCACTCCGAGCATTGGCGCATGCCTGTCACTCCCGATCTC
CTCCTCCTCCCCTCCAAGCTCACCCCATTCGCCAAAGACGTAGGTGGCGC
GCTTTGCATCAATCCCGGCACCCTCACAAAGGGCGGAGGCGGAGGCACGT
ACGCGATGCTTAACATCCATCCCTTGCCTTTTGACCGTTTGGAGAAAATG
GCACCCGGGACTGAGGTACCACATGAGGTGGCAAGGCGGACGAGCGTGGA
GATCGTGCGTATTTAG back to top
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