NO08G00610.1, NO08G00610.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO08G00610.1
Unique NameNO08G00610.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2003
Alignment locationchr8:219287..221865 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:219287..221865 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO08G00610.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G00610NO08G00610Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO08G00610.1NO08G00610.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO08G00610.1.cds1NO08G00610.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G00610.1.cds2NO08G00610.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO08G00610.1 ID=NO08G00610.1|Name=NO08G00610.1|organism=Nannochloropsis oceanica|type=mRNA|length=2003bp
TGTTGTAGTTGTTGTCGTTGCTTTTCGCGTCGAGAATAATCAGCACTCTG
TTGCCTTCTTGCCATGTCCCCTTCCTCGGAGCCTCCTCCGTTCCGTTCCC
GTCGTCCTCGCTTTGGTCGTGCGAAAGCGGCAGGTTATTTCCAAGAACCC
CGAGCGCCTTTTCCTTTGAAGCTTACGCATGGGCTTGGGCTTGAGTGATA
AGACGTAGGTTGGGAAGCCTGGTTTTGCCTTTTGACGACACCTTTTCTGA
TTGAGACTCCGAGTCGGACTCTCGGATAACGACTTGGTAGTGCTGCTGGG
CGAGCTTTCACACTCTCCAGGACACACACCCGTACAATTCTTCGCTTCCA
ACGCCCGACTCTCCACATACACATGCACAGTCATCCCGCGGGGGAGTGGG
GCTGTATTGTACCGCGGAGAAGGCAGCTCATCACAAAAAAGGTGCACACA
TATTCGTATAATTTAAAGAGTAAGCACATCGAGAAAGAAAGATGGAAGAA
TTGCAGGATGTGCTCGAGGACGTCACGTACATGAATGCCATGTCGGATGA
CTCCCCCAAGCCAACCAAGGCATGGGAGCTACCCGACGAGTCCACCCTAC
AGTCGTTCCTCTTGTCCGTATCGGTCGCGGATCCTACAGCTTTCTCCCTG
GACAAGATATGCCAGGATTCCTTAGGCTTCTACCTCTTCTGCAAATTCTG
CAAGCAACAGGGCCAGGGTGAGGGAGGGAGGGAAGAAGGGTGCATCTCCA
TACCCTCTACAACTTCGATCAAGGCCCGCTTTTTGGAGGAGGTGGTGAGG
TACCGTAAATCGGTGGGGGAGCGAGGGAGGGCGATCAAGGCCCTGAGCAT
CCTTTGCCGTTACCTCCTCTCTCCTACTGACGTTGCCGAACAGATGGGCG
AGGGGCTAGTGGCATGCATGGAGGAGGGAGAGGGAAGGGGAATGATGGAA
AAGGTGGATTTAAATGAAGGGGATTTAAACCGAATTCCGAACATGAGTTT
GAGTGGAGAAGATTTGCAGGCTTGCTATGAGGAGGCATGGAAGGAGGGGG
AGGACGCCCAGGCCTCCCTCCCTTCCTCGACTCTTCCTTTACCGACGACG
TGGCAGGTCGGGGGGGATGGCGGGAAGGAGGGAGACTTCGTTGGCAGCAG
CCCCACCAGCAGCAGCAGCAGCAGGAGCAGCAGCGGCAGTGGCTGTGTTG
GTGTGGGAAAAGGAGTTGGGCACGTTCCACCCGAGGGAGGCCGGGAGGAT
GGGAAGGAGGGGGGAGGGATGGATGGCCGGGCGTCGCGTTTGTTGGTGAG
CAATCCGCATTTGAATGCGTTGAGGATTGGGGGAAGGACGGTGGACGAGG
TCCGTGCTATCATTTTACGGGCTGCTGGCCCGCTGCTGCGGGAGATGGTG
GCGGCCGCAGCAAGAGTGCGGCAGCAACAGCAGGAGCAAGAGCAGCAACT
GCAGCAACAGCTGCAAGAGCAACAGTTGTCGAAGGCTGTAGAAGGAGGAA
CAAGAATAGGAGGGGGAGGAGGAGGGAAGACGGGAGGAGTGCTCCCATTG
AGCCAGGGATCGATGATGAAGGGGGAGAAAGGGGAGGAGGGAGAGATGAT
GCTGAATGTGAATGCTACGCATAATTTGATGCCGTCGGACGCAGTCTTGG
TGGATTCTGTGCCCTCTGGCCCGTCGGGCTCTCTCTCCTCCTCCTCCTCC
TCCTCCTCCTCCTCGTCCTCCTCCTCGTCATCGGGGGCCAGGAGGAATGG
AAGGGAGGTGCCCGGCAGCGCAAGCACCAAAGACACCTATGTCACGCAGC
AGAAAGTTACATCAGTAGTAGCAACAACAGCAGCAGCAGCAGGGGGAGGA
GGAGGAGGAGGACAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGG
AGGAGGGGGAGGAGGAGGAGCAGGGAGAGGAGGAGGGGGGAAGGAGGAGG
GGGAAAGGTTAGAGAAGCAGTCGCGGCAGCAGCAACAGCAGCAACAACAG
TAG
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protein sequence of NO08G00610.1

>NO08G00610.1-protein ID=NO08G00610.1-protein|Name=NO08G00610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=504bp
MEELQDVLEDVTYMNAMSDDSPKPTKAWELPDESTLQSFLLSVSVADPTA
FSLDKICQDSLGFYLFCKFCKQQGQGEGGREEGCISIPSTTSIKARFLEE
VVRYRKSVGERGRAIKALSILCRYLLSPTDVAEQMGEGLVACMEEGEGRG
MMEKVDLNEGDLNRIPNMSLSGEDLQACYEEAWKEGEDAQASLPSSTLPL
PTTWQVGGDGGKEGDFVGSSPTSSSSSRSSSGSGCVGVGKGVGHVPPEGG
REDGKEGGGMDGRASRLLVSNPHLNALRIGGRTVDEVRAIILRAAGPLLR
EMVAAAARVRQQQQEQEQQLQQQLQEQQLSKAVEGGTRIGGGGGGKTGGV
LPLSQGSMMKGEKGEEGEMMLNVNATHNLMPSDAVLVDSVPSGPSGSLSS
SSSSSSSSSSSSSSGARRNGREVPGSASTKDTYVTQQKVTSVVATTAAAA
GGGGGGGQGGGGGGGGGGRGGGGGGGAGRGGGGKEEGERLEKQSRQQQQQ
QQQ*
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mRNA from alignment at chr8:219287..221865-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO08G00610.1 ID=NO08G00610.1|Name=NO08G00610.1|organism=Nannochloropsis oceanica|type=mRNA|length=2579bp|location=Sequence derived from alignment at chr8:219287..221865- (Nannochloropsis oceanica)
TGTTGTAGTTGTTGTCGTTGCTTTTCGCGTCGAGAATAATCAGCACTCTG
TTGCCTTCTTGCCATGTCCCCTTCCTCGGAGCCTCCTCCGTTCCGTTCCC
GTCGTCCTCGCTTTGGTCGTGCGAAAGCGGCAGGTTATTTCCAAGAACCC
CGAGCGCCTTTTCCTTTGAAGCTTACGCATGGGCTTGGGCTTGAGTGATA
AGACGTAGGTTGGGAAGCCTGGTTTTGCCTTTTGACGACACCTTTTCTGA
TTGAGACTCCGAGTCGGACTCTCGGATAACGACTTGGTAGTGCTGCTGGG
CGAGCTTTCACACTCTCCAGGACACACACCCGTACAATTCTTCGCTTCCA
ACGCCCGACTCTCCACATACACATGCACAGTCATCCCGCGGGGGAGTGGG
GCTGTATTGTACCGCGGAGAAGGCAGCTCATCACAAAAAAGGTGAGTGCG
AAGCTCGGAGGGAGGGAGTGAAGTGCAATTTTTAATGCCCTGGTTCTGAA
GGTAAGGAGGAAAGTAAACTCTACCGACCACGCCAAACTTCCCTACTTTA
CGCGCGCATGGCATGCGCTAGATAACGAGTGTGTATATGAGCGAGCGGAT
TGTTACTGGAAGCTGTGAAATATCGAAGTAATATGGTTGTCCGATAGCCT
TTTCCTTCTAAACCACACGTGTTATTACAAGAATTGTTCTAATAATACAT
CTCGATTCGCCATGACCATCCACACGGACAGGTGCACACATATTCGTATA
ATTTAAAGAGTAAGCACATCGAGAAAGAAAGATGGAAGAATTGCAGGTAC
GTGGACGCGTGGGGATAGAAGGATGGACAGAAGACGGGAGGGAGAAGCAT
GGCCCAAATGCCCTTTCTGCTTGTTACGATCATTGAAAGTAGTCATATGG
CCGTGATCCCTATGATGTTCTCTGCGTCTATTCTTTCCTTACATTCCAGC
GTGTCTCGGTCCTGTATCGAGCCTTTTTCCAGTGTCCCCCTTGCAGACGG
AATGCCGGAAGGAGGGGGGGGGAACGATAAACCCGTCTCACCCTCCCTCC
CTCTTCCACTCCTTCCCTCTTCCTCCCACCAGGATGTGCTCGAGGACGTC
ACGTACATGAATGCCATGTCGGATGACTCCCCCAAGCCAACCAAGGCATG
GGAGCTACCCGACGAGTCCACCCTACAGTCGTTCCTCTTGTCCGTATCGG
TCGCGGATCCTACAGCTTTCTCCCTGGACAAGATATGCCAGGATTCCTTA
GGCTTCTACCTCTTCTGCAAATTCTGCAAGCAACAGGGCCAGGGTGAGGG
AGGGAGGGAAGAAGGGTGCATCTCCATACCCTCTACAACTTCGATCAAGG
CCCGCTTTTTGGAGGAGGTGGTGAGGTACCGTAAATCGGTGGGGGAGCGA
GGGAGGGCGATCAAGGCCCTGAGCATCCTTTGCCGTTACCTCCTCTCTCC
TACTGACGTTGCCGAACAGATGGGCGAGGGGCTAGTGGCATGCATGGAGG
AGGGAGAGGGAAGGGGAATGATGGAAAAGGTGGATTTAAATGAAGGGGAT
TTAAACCGAATTCCGAACATGAGTTTGAGTGGAGAAGATTTGCAGGCTTG
CTATGAGGAGGCATGGAAGGAGGGGGAGGACGCCCAGGCCTCCCTCCCTT
CCTCGACTCTTCCTTTACCGACGACGTGGCAGGTCGGGGGGGATGGCGGG
AAGGAGGGAGACTTCGTTGGCAGCAGCCCCACCAGCAGCAGCAGCAGCAG
GAGCAGCAGCGGCAGTGGCTGTGTTGGTGTGGGAAAAGGAGTTGGGCACG
TTCCACCCGAGGGAGGCCGGGAGGATGGGAAGGAGGGGGGAGGGATGGAT
GGCCGGGCGTCGCGTTTGTTGGTGAGCAATCCGCATTTGAATGCGTTGAG
GATTGGGGGAAGGACGGTGGACGAGGTCCGTGCTATCATTTTACGGGCTG
CTGGCCCGCTGCTGCGGGAGATGGTGGCGGCCGCAGCAAGAGTGCGGCAG
CAACAGCAGGAGCAAGAGCAGCAACTGCAGCAACAGCTGCAAGAGCAACA
GTTGTCGAAGGCTGTAGAAGGAGGAACAAGAATAGGAGGGGGAGGAGGAG
GGAAGACGGGAGGAGTGCTCCCATTGAGCCAGGGATCGATGATGAAGGGG
GAGAAAGGGGAGGAGGGAGAGATGATGCTGAATGTGAATGCTACGCATAA
TTTGATGCCGTCGGACGCAGTCTTGGTGGATTCTGTGCCCTCTGGCCCGT
CGGGCTCTCTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCGTCCTCCTCC
TCGTCATCGGGGGCCAGGAGGAATGGAAGGGAGGTGCCCGGCAGCGCAAG
CACCAAAGACACCTATGTCACGCAGCAGAAAGTTACATCAGTAGTAGCAA
CAACAGCAGCAGCAGCAGGGGGAGGAGGAGGAGGAGGACAAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGGGGAGGAGGAGGAGCAGG
GAGAGGAGGAGGGGGGAAGGAGGAGGGGGAAAGGTTAGAGAAGCAGTCGC
GGCAGCAGCAACAGCAGCAACAACAGTAG
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Coding sequence (CDS) from alignment at chr8:219287..221865-

>NO08G00610.1 ID=NO08G00610.1|Name=NO08G00610.1|organism=Nannochloropsis oceanica|type=CDS|length=1512bp|location=Sequence derived from alignment at chr8:219287..221865- (Nannochloropsis oceanica)
ATGGAAGAATTGCAGGATGTGCTCGAGGACGTCACGTACATGAATGCCAT
GTCGGATGACTCCCCCAAGCCAACCAAGGCATGGGAGCTACCCGACGAGT
CCACCCTACAGTCGTTCCTCTTGTCCGTATCGGTCGCGGATCCTACAGCT
TTCTCCCTGGACAAGATATGCCAGGATTCCTTAGGCTTCTACCTCTTCTG
CAAATTCTGCAAGCAACAGGGCCAGGGTGAGGGAGGGAGGGAAGAAGGGT
GCATCTCCATACCCTCTACAACTTCGATCAAGGCCCGCTTTTTGGAGGAG
GTGGTGAGGTACCGTAAATCGGTGGGGGAGCGAGGGAGGGCGATCAAGGC
CCTGAGCATCCTTTGCCGTTACCTCCTCTCTCCTACTGACGTTGCCGAAC
AGATGGGCGAGGGGCTAGTGGCATGCATGGAGGAGGGAGAGGGAAGGGGA
ATGATGGAAAAGGTGGATTTAAATGAAGGGGATTTAAACCGAATTCCGAA
CATGAGTTTGAGTGGAGAAGATTTGCAGGCTTGCTATGAGGAGGCATGGA
AGGAGGGGGAGGACGCCCAGGCCTCCCTCCCTTCCTCGACTCTTCCTTTA
CCGACGACGTGGCAGGTCGGGGGGGATGGCGGGAAGGAGGGAGACTTCGT
TGGCAGCAGCCCCACCAGCAGCAGCAGCAGCAGGAGCAGCAGCGGCAGTG
GCTGTGTTGGTGTGGGAAAAGGAGTTGGGCACGTTCCACCCGAGGGAGGC
CGGGAGGATGGGAAGGAGGGGGGAGGGATGGATGGCCGGGCGTCGCGTTT
GTTGGTGAGCAATCCGCATTTGAATGCGTTGAGGATTGGGGGAAGGACGG
TGGACGAGGTCCGTGCTATCATTTTACGGGCTGCTGGCCCGCTGCTGCGG
GAGATGGTGGCGGCCGCAGCAAGAGTGCGGCAGCAACAGCAGGAGCAAGA
GCAGCAACTGCAGCAACAGCTGCAAGAGCAACAGTTGTCGAAGGCTGTAG
AAGGAGGAACAAGAATAGGAGGGGGAGGAGGAGGGAAGACGGGAGGAGTG
CTCCCATTGAGCCAGGGATCGATGATGAAGGGGGAGAAAGGGGAGGAGGG
AGAGATGATGCTGAATGTGAATGCTACGCATAATTTGATGCCGTCGGACG
CAGTCTTGGTGGATTCTGTGCCCTCTGGCCCGTCGGGCTCTCTCTCCTCC
TCCTCCTCCTCCTCCTCCTCCTCGTCCTCCTCCTCGTCATCGGGGGCCAG
GAGGAATGGAAGGGAGGTGCCCGGCAGCGCAAGCACCAAAGACACCTATG
TCACGCAGCAGAAAGTTACATCAGTAGTAGCAACAACAGCAGCAGCAGCA
GGGGGAGGAGGAGGAGGAGGACAAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAAGAGGAGGAGGGGGAGGAGGAGGAGCAGGGAGAGGAGGAGGGGGGA
AGGAGGAGGGGGAAAGGTTAGAGAAGCAGTCGCGGCAGCAGCAACAGCAG
CAACAACAGTAG
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Synonyms
Publications