NO04G04100.1, NO04G04100.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO04G04100.1
Unique Name	NO04G04100.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3465
Alignment location	chr4:1113940..1117490 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr4	genome	chr4:1113940..1117490 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO04G04100.1 vs.
Match: EWM28714.1 (2 peptidase [Nannochloropsis gaditana])

HSP 1 Score: 691.8 bits (1784), Expect = 3.200e-195
Identity = 532/1084 (49.08%), Postives = 649/1084 (59.87%), Query Frame = 0

Query:   20 LVLVLVIILALCRGRKTLTPSVGTS---------------------VGAFVSRSDL--GFKSRQPSASPSKRPLIAATALPTTLSPHRARLAPLSAGMWRFDKELTQPQSQENGDDSGFDPPGKGIFRFVWGLLKKRTVQAIGITAFALSAVKNGGGGRKAAGGKVGILDGGGAANAPERYVRSKDPDASSKQQQREQEQ---EQPQKQEHKIAGAGAGAASKSAAVPLPDAECPILPPDDSSSGSSSKKGTAEEPAVPAAVPSSEQQQHQQQQDGEASGTAAADSLAPEINKEGG---KEARS-PWTPFKNW-RSKERGA------REGE-KVVLRQEQQEQQPRKDREEAVGEGITLNRGTAKKDEGAPATDDSKQGEQR-ENVQDRINPEE-EEAEAEEEEEVEEEEEMEEDGDGTVPFDERESALLEDGEAFLARRGTTQPGQAATSGSRATGKKKNDNNDKNDNKQSKRQQQQQKQQHEKNKHPSVVPRPDSGVSSPSTTKLSIPPSLHPSRPGGSSSFVSGVFRAIAPAVPRVDCVKVYKGEIKFASGSGVIFTPEGYMITNSLLVRNALELKVTLADGREFPAEVKGVDEVLDVAVLKILPPSPLPRPR-----------------------DWVLSVGSPRSPGPSVILGIVSGLTKTAAEVGRPETQVSFIQTDASFDAGVVGGPLVNEYGEVVGINSIGLTTSNTVQFSVPINELKVAVEELAMGNEVLHPSIGVEMMPVTPTLAAQLNQKAAARQRQIQVEQEEKAVKELAEQQELQRKEQQQPQQQQAEKGGKGARGQRKRGGMERGRS--AFSEILRKAQQAGKHLLQ-QPPQNHYPPSPSPSPSPPFSPSTPSSSSSSSSSSSQIHFIPEGGAVVVVNVLEDSPAQQAGLQHLDILLEIDRCPIYKVEDAQRIIHASGVGRDIEIKVLRSTQEVTVQVRTTDFLTLFRKQQTAKRYPELKPKVERKREGLNEGGREQLEREGDGEELEESPLGGKGGLHQRSASNDGKGGNERGEERKKTGLMKQSKKEERQM------------REEEGDRQATKDREAPDEMHGELWT 1026
            + LVLV +L LC   K +T  V                        VG FV    +  G + R+   S S+        LP+T++   AR   LSAG+WRFD+E  QP   E  D  GFDPPGKG+ R VW +L++R+VQ +G+   ALS  +NG   RK +G   GIL G G  NAPERYVRSKDP  +  QQ+ E+E+   E+  KQE + A        K ++ P P A  P+ P  DS +   + +G  EE +     PSSE+   +     E  G            KE G   KEAR  P   F+ W RSK  G       REGE +    +E  E +  K+ E     G     G A+K  G     D K GE+  E+ + R+   E  E E EE +E EEEEE EE+G+GTVPF+ERE+ LLEDGEAFLARRG    G    +  R                    + Q++ +       P+VVP P +  SS S+T    PP    +RP GSSSFV GVFRA+APAVPRVDCVKVYKGEIKFASGSGVI++PEGY++TNSLLVRNALELKVTLADGRE+PAE+KGVDEVLDVAVLKI+PP P P P                        DWVLSVGSPRSPGPSVILGIVSGLTKTAAEVGRPETQVSFIQTDASFDAGVVGGPLVNEYGEVVGINSIGL TS+TVQFSVPIN+LK AVE LA G EV HPSIGVEMMP+TPTLAAQLNQ+A  RQ Q+QV++EE+  +   ++Q+ ++           EKG + + G+R+ G  + G +  A +  LRKAQ AG  L Q Q P +   P P PS SP     +    SSSSS +SQI FIPEGGAVVVV+VLEDSPAQ AGL+HLDILLEIDRCPIY V DAQR+IH+SGVGR++EIKVLR+TQEVT+ VRTTDFLTLF+KQQ AK+YPEL+PKV+  R    EGG        DGE      +GG  G             +ERGEE    G  ++  ++  Q+             ++ GD ++ K+ E  D + GE WT
Sbjct:   10 MALVLVFLLILCGCEKLVTAEVSAGGHSRLEIRLQVTSRDRYAIQGVGGFVHAPGMSDGRRLRRMPLSTSRHS--PGPPLPSTMAIAHARARSLSAGLWRFDREF-QPSPAEEED--GFDPPGKGLLRLVWNVLRRRSVQVVGVAVLALSFFRNGLE-RKGSGKAGGILHGNGVPNAPERYVRSKDPAVTKSQQKSEREKKRLEKEPKQETERAEQPGLRRGKESSTPFPLAGKPV-PLLDSEAPVPAPEGVQEEGSGAVGAPSSEKDAGE-----EPLGPGPDTEKRFGAGKEQGLARKEARGGPLGLFRGWGRSKTEGEQAGGGRREGEGETGHGKETDEGRVGKEEEGKAQSG----EGGAEKGTGGGI--DGKGGEEVVESGERRVEGREGREEEGEERKEEEEEEEEEEEGEGTVPFEERETPLLEDGEAFLARRGDVLQGAPVGTEGREV------------------RAQRRGRPRRAEPGPAVVPVPGAPPSSSSST--FPPPPASSARPSGSSSFVGGVFRAVAPAVPRVDCVKVYKGEIKFASGSGVIYSPEGYLMTNSLLVRNALELKVTLADGREYPAEIKGVDEVLDVAVLKIIPPIP-PAPASSPPSLPTFQYAPIGDSESLQVGDWVLSVGSPRSPGPSVILGIVSGLTKTAAEVGRPETQVSFIQTDASFDAGVVGGPLVNEYGEVVGINSIGLRTSSTVQFSVPINQLKAAVEALARGREVHHPSIGVEMMPITPTLAAQLNQQAMLRQGQLQVQEEERMAEGKRQRQDARK-----------EKGQRRSGGRRQVGDGKDGDTGGALAHFLRKAQHAGDFLRQWQQPSDRSTPLPPPSSSP-----SSVGPSSSSSPASQIQFIPEGGAVVVVHVLEDSPAQHAGLRHLDILLEIDRCPIYGVGDAQRVIHSSGVGRNLEIKVLRNTQEVTLHVRTTDFLTLFKKQQAAKKYPELRPKVKEGRRVGEEGGWL------DGENARHEQVGGVPG---EQEGEQQPASDERGEEGLAVGECEEVNEKGAQVGRKASPRAAARGEDKRGDGRSAKETERED-LQGECWT 1028

The following BLAST results are available for this feature:

BLAST of NO04G04100.1 vs.

BLAST of NO04G04100.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM28714.1	3.200e-195	49.08	2 peptidase [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO04G04100	NO04G04100	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO04G04100.1	NO04G04100.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO04G04100.1.cds1	NO04G04100.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04100.1.cds2	NO04G04100.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr4:1113940..1117490-
coding sequence from alignment at chr4:1113940..1117490-

mRNA sequence

>NO04G04100.1 ID=NO04G04100.1|Name=NO04G04100.1|organism=Nannochloropsis oceanica|type=mRNA|length=3465bp
ATGACAGCCTTCAGCACCTGTAGTCGCAGGCCCAGGTCACTTCAAGGCCA
AGCGTTGCTCGTCCTCGTCCTCGTCATCATCCTCGCGTTGTGCAGAGGAA
GAAAGACCCTGACGCCGTCAGTGGGGACGAGCGTGGGAGCGTTTGTGAGC
CGTTCAGACTTAGGATTCAAATCTCGCCAGCCATCAGCTTCCCCCTCAAA
GCGCCCGCTCATTGCCGCCACAGCCCTGCCAACTACCCTTTCACCTCATC
GCGCCCGCCTCGCCCCCCTCTCCGCAGGCATGTGGCGTTTCGATAAAGAG
CTGACCCAGCCTCAATCACAAGAGAATGGTGATGATTCGGGGTTTGATCC
GCCGGGAAAGGGAATCTTTCGGTTTGTGTGGGGGTTGCTAAAAAAACGCA
CGGTGCAAGCAATAGGCATAACGGCGTTCGCCCTCAGTGCAGTCAAAAAT
GGGGGCGGAGGAAGGAAAGCAGCGGGGGGAAAGGTTGGAATTCTGGATGG
TGGCGGAGCAGCGAATGCTCCGGAGCGGTATGTGAGAAGTAAGGATCCCG
ACGCCTCATCCAAACAGCAGCAGCGGGAGCAGGAGCAAGAGCAGCCGCAA
AAGCAGGAGCATAAAATAGCGGGAGCTGGAGCAGGAGCAGCATCTAAGTC
AGCTGCTGTGCCCCTGCCAGATGCTGAGTGCCCTATTTTGCCTCCGGACG
ACAGCAGTAGCGGCAGCAGCAGCAAGAAAGGAACTGCGGAAGAGCCAGCA
GTACCTGCAGCAGTACCATCGTCAGAGCAGCAGCAGCATCAGCAGCAGCA
GGACGGGGAAGCGTCAGGTACAGCTGCAGCAGATTCTCTTGCTCCCGAGA
TAAACAAAGAGGGAGGGAAGGAGGCCAGGTCACCTTGGACACCATTTAAG
AACTGGAGGAGCAAAGAGAGGGGGGCGAGGGAGGGAGAGAAGGTTGTACT
GCGGCAGGAGCAGCAGGAGCAGCAGCCACGGAAGGATAGAGAGGAAGCGG
TGGGAGAAGGTATTACACTCAATAGAGGGACAGCGAAAAAAGATGAGGGG
GCACCTGCGACAGATGACAGCAAGCAGGGCGAGCAGAGGGAAAATGTCCA
GGACCGCATCAACCCCGAAGAGGAGGAGGCGGAGGCTGAAGAGGAGGAGG
AGGTGGAGGAGGAGGAGGAGATGGAGGAGGATGGGGATGGCACCGTGCCA
TTTGATGAACGCGAATCTGCCCTTCTGGAGGATGGAGAGGCCTTCCTCGC
ACGCCGTGGGACTACTCAGCCCGGGCAAGCCGCCACCTCCGGTTCCCGTG
CCACCGGCAAGAAGAAGAACGACAACAACGACAAAAACGACAACAAACAA
AGCAAAAGGCAACAGCAGCAGCAAAAGCAGCAGCATGAGAAAAATAAACA
TCCCTCCGTCGTCCCAAGACCCGATTCTGGTGTCTCCTCCCCGTCTACCA
CCAAGCTCTCTATCCCCCCCTCCCTCCATCCCTCCCGGCCGGGGGGCTCC
TCCTCCTTTGTCTCAGGTGTGTTCCGCGCCATCGCCCCCGCCGTTCCGCG
CGTCGACTGCGTGAAAGTTTACAAGGGAGAAATAAAATTCGCCTCCGGTT
CGGGCGTTATTTTCACCCCGGAAGGGTATATGATAACCAATTCTCTTCTT
GTGCGGAACGCGTTGGAGTTGAAGGTGACACTTGCCGACGGTCGAGAATT
TCCCGCCGAGGTGAAGGGGGTGGATGAAGTCCTCGATGTGGCGGTGCTTA
AAATCCTTCCTCCCTCCCCCCTCCCTCGTCCTCGCGATTGGGTGCTATCG
GTGGGTAGCCCTCGTTCCCCCGGCCCTTCCGTCATCCTAGGCATTGTTAG
TGGCCTCACCAAAACAGCTGCAGAAGTGGGTCGGCCCGAGACGCAAGTCT
CCTTCATCCAAACAGACGCGAGTTTCGATGCAGGTGTTGTGGGAGGCCCC
CTGGTGAACGAGTACGGGGAGGTGGTGGGGATCAATAGCATCGGGCTCAC
CACCAGCAACACAGTACAGTTCTCTGTCCCGATCAATGAGTTGAAAGTGG
CCGTGGAAGAGCTGGCTATGGGGAATGAGGTCCTGCATCCATCCATTGGG
GTGGAGATGATGCCCGTCACTCCCACCCTTGCTGCTCAGCTGAACCAGAA
GGCAGCGGCAAGACAGCGGCAAATCCAGGTTGAGCAGGAGGAGAAGGCAG
TGAAAGAGCTTGCGGAGCAACAGGAGTTGCAACGAAAGGAGCAACAGCAA
CCGCAGCAGCAGCAGGCAGAGAAGGGAGGAAAGGGCGCGAGAGGACAAAG
AAAAAGAGGTGGAATGGAAAGGGGGAGAAGTGCCTTCTCTGAAATTTTGC
GCAAAGCTCAACAAGCAGGCAAGCACCTCCTCCAACAACCTCCACAAAAC
CACTACCCACCCTCTCCCTCCCCCTCCCCTTCCCCGCCGTTTTCTCCTTC
CACACCCTCCTCCTCTTCCTCTTCTTCGTCCTCTTCCTCGCAAATCCATT
TCATCCCCGAGGGGGGCGCAGTGGTGGTCGTCAACGTTCTAGAAGATTCC
CCTGCCCAACAAGCAGGCCTGCAGCACTTGGACATTCTGCTTGAGATCGA
TCGATGCCCCATCTACAAGGTGGAAGATGCGCAAAGGATCATCCACGCGT
CCGGGGTCGGGAGGGACATAGAGATAAAGGTACTAAGAAGCACACAGGAA
GTCACTGTGCAAGTGAGGACGACTGATTTTTTGACTCTGTTTCGAAAGCA
ACAGACGGCCAAAAGGTACCCTGAGCTGAAGCCAAAGGTGGAGAGGAAGA
GGGAGGGATTGAACGAGGGGGGAAGGGAACAGTTGGAGAGGGAGGGGGAC
GGGGAAGAGCTGGAGGAATCGCCGTTGGGAGGGAAGGGGGGGCTGCATCA
GCGGTCGGCGAGTAATGATGGGAAGGGAGGAAATGAGAGAGGTGAAGAGA
GAAAGAAGACGGGGTTGATGAAACAGAGTAAGAAGGAGGAGAGGCAGATG
AGGGAGGAGGAGGGAGATAGACAGGCAACAAAAGATAGGGAAGCACCAGA
TGAGATGCATGGAGAATTGTGGACTTAAATTAGGCGATCGCGTCTGTGGT
TTTGGAGAAGAGAGACATCGTGAATATATACATATACATGTATTTTCTTA
CATACAAATCAAATTAAACCAGACTTGCCCGCAGCAGATAAAACAAATAT
CCTCATTTTCCCACAATCAATGGACCGATTAAAATTTGTTGGAACTTTTT
TGTGGTTGCTCTTAGGTTTAGTGACAAAACAACAGAAACAGAATCACGAC
ACGTAAAATGAAAGGAACAACTTTACATAGAGATGAGGATAGCGGATATT
TGATCGGAGCTCGGAACGAGAGGCAGTCTCTTTGTGGCAGCGCCTTGGCG
AAAGCCATTGCGTTCATGTCCCATACAGCGAAAGCAAATGCACTAATTTC
AACTCCAATGATAAA

protein sequence of NO04G04100.1

>NO04G04100.1-protein ID=NO04G04100.1-protein|Name=NO04G04100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1026bp
MTAFSTCSRRPRSLQGQALLVLVLVIILALCRGRKTLTPSVGTSVGAFVS
RSDLGFKSRQPSASPSKRPLIAATALPTTLSPHRARLAPLSAGMWRFDKE
LTQPQSQENGDDSGFDPPGKGIFRFVWGLLKKRTVQAIGITAFALSAVKN
GGGGRKAAGGKVGILDGGGAANAPERYVRSKDPDASSKQQQREQEQEQPQ
KQEHKIAGAGAGAASKSAAVPLPDAECPILPPDDSSSGSSSKKGTAEEPA
VPAAVPSSEQQQHQQQQDGEASGTAAADSLAPEINKEGGKEARSPWTPFK
NWRSKERGAREGEKVVLRQEQQEQQPRKDREEAVGEGITLNRGTAKKDEG
APATDDSKQGEQRENVQDRINPEEEEAEAEEEEEVEEEEEMEEDGDGTVP
FDERESALLEDGEAFLARRGTTQPGQAATSGSRATGKKKNDNNDKNDNKQ
SKRQQQQQKQQHEKNKHPSVVPRPDSGVSSPSTTKLSIPPSLHPSRPGGS
SSFVSGVFRAIAPAVPRVDCVKVYKGEIKFASGSGVIFTPEGYMITNSLL
VRNALELKVTLADGREFPAEVKGVDEVLDVAVLKILPPSPLPRPRDWVLS
VGSPRSPGPSVILGIVSGLTKTAAEVGRPETQVSFIQTDASFDAGVVGGP
LVNEYGEVVGINSIGLTTSNTVQFSVPINELKVAVEELAMGNEVLHPSIG
VEMMPVTPTLAAQLNQKAAARQRQIQVEQEEKAVKELAEQQELQRKEQQQ
PQQQQAEKGGKGARGQRKRGGMERGRSAFSEILRKAQQAGKHLLQQPPQN
HYPPSPSPSPSPPFSPSTPSSSSSSSSSSSQIHFIPEGGAVVVVNVLEDS
PAQQAGLQHLDILLEIDRCPIYKVEDAQRIIHASGVGRDIEIKVLRSTQE
VTVQVRTTDFLTLFRKQQTAKRYPELKPKVERKREGLNEGGREQLEREGD
GEELEESPLGGKGGLHQRSASNDGKGGNERGEERKKTGLMKQSKKEERQM
REEEGDRQATKDREAPDEMHGELWT*

mRNA from alignment at chr4:1113940..1117490-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO04G04100.1 ID=NO04G04100.1|Name=NO04G04100.1|organism=Nannochloropsis oceanica|type=mRNA|length=3551bp|location=Sequence derived from alignment at chr4:1113940..1117490- (Nannochloropsis oceanica)
ATGACAGCCTTCAGCACCTGTAGTCGCAGGCCCAGGTCACTTCAAGGCCA
AGCGTTGCTCGTCCTCGTCCTCGTCATCATCCTCGCGTTGTGCAGAGGAA
GAAAGACCCTGACGCCGTCAGTGGGGACGAGCGTGGGAGCGTTTGTGAGC
CGTTCAGACTTAGGATTCAAATCTCGCCAGCCATCAGCTTCCCCCTCAAA
GCGCCCGCTCATTGCCGCCACAGCCCTGCCAACTACCCTTTCACCTCATC
GCGCCCGCCTCGCCCCCCTCTCCGCAGGCATGTGGCGTTTCGATAAAGAG
CTGACCCAGCCTCAATCACAAGAGAATGGTGATGATTCGGGGTTTGATCC
GCCGGGAAAGGGAATCTTTCGGTTTGTGTGGGGGTTGCTAAAAAAACGCA
CGGTGCAAGCAATAGGCATAACGGCGTTCGCCCTCAGTGCAGTCAAAAAT
GGGGGCGGAGGAAGGAAAGCAGCGGGGGGAAAGGTTGGAATTCTGGATGG
TGGCGGAGCAGCGAATGCTCCGGAGCGGTATGTGAGAAGTAAGGATCCCG
ACGCCTCATCCAAACAGCAGCAGCGGGAGCAGGAGCAAGAGCAGCCGCAA
AAGCAGGAGCATAAAATAGCGGGAGCTGGAGCAGGAGCAGCATCTAAGTC
AGCTGCTGTGCCCCTGCCAGATGCTGAGTGCCCTATTTTGCCTCCGGACG
ACAGCAGTAGCGGCAGCAGCAGCAAGAAAGGAACTGCGGAAGAGCCAGCA
GTACCTGCAGCAGTACCATCGTCAGAGCAGCAGCAGCATCAGCAGCAGCA
GGACGGGGAAGCGTCAGGTACAGCTGCAGCAGATTCTCTTGCTCCCGAGA
TAAACAAAGAGGGAGGGAAGGAGGCCAGGTCACCTTGGACACCATTTAAG
AACTGGAGGAGCAAAGAGAGGGGGGCGAGGGAGGGAGAGAAGGTTGTACT
GCGGCAGGAGCAGCAGGAGCAGCAGCCACGGAAGGATAGAGAGGAAGCGG
TGGGAGAAGGTATTACACTCAATAGAGGGACAGCGAAAAAAGATGAGGGG
GCACCTGCGACAGATGACAGCAAGCAGGGCGAGCAGAGGGAAAATGTCCA
GGACCGCATCAACCCCGAAGAGGAGGAGGCGGAGGCTGAAGAGGAGGAGG
AGGTGGAGGAGGAGGAGGAGATGGAGGAGGATGGGGATGGCACCGTGCCA
TTTGATGAACGCGAATCTGCCCTTCTGGAGGATGGAGAGGCCTTCCTCGC
ACGCCGTGGGACTACTCAGCCCGGGCAAGCCGCCACCTCCGGTTCCCGTG
CCACCGGCAAGAAGAAGAACGACAACAACGACAAAAACGACAACAAACAA
AGCAAAAGGCAACAGCAGCAGCAAAAGCAGCAGCATGAGAAAAATAAACA
TCCCTCCGTCGTCCCAAGACCCGATTCTGGTGTCTCCTCCCCGTCTACCA
CCAAGCTCTCTATCCCCCCCTCCCTCCATCCCTCCCGGCCGGGGGGCTCC
TCCTCCTTTGTCTCAGGTGTGTTCCGCGCCATCGCCCCCGCCGTTCCGCG
CGTCGACTGCGTGAAAGTTTACAAGGGAGAAATAAAATTCGCCTCCGGTT
CGGGCGTTATTTTCACCCCGGAAGGGTATATGATAACCAATTCTCTTCTT
GTGCGGAACGCGTTGGAGTTGAAGGTGACACTTGCCGACGGTCGAGAATT
TCCCGCCGAGGTGAAGGGGGTGGATGAAGTCCTCGATGTGGCGGTGCTTA
AAATCCTTCCTCCCTCCCCCCTCCCTCGTCCTCGTCCTCATCCTCGTCCT
CGTCCTCGTCCTCATTCCCTTCCTCTTTTGAATACGCGCCAATCGGAGAC
TCGGACGCCCTGCAAGTAGGCGATTGGGTGCTATCGGTGGGTAGCCCTCG
TTCCCCCGGCCCTTCCGTCATCCTAGGCATTGTTAGTGGCCTCACCAAAA
CAGCTGCAGAAGTGGGTCGGCCCGAGACGCAAGTCTCCTTCATCCAAACA
GACGCGAGTTTCGATGCAGGTGTTGTGGGAGGCCCCCTGGTGAACGAGTA
CGGGGAGGTGGTGGGGATCAATAGCATCGGGCTCACCACCAGCAACACAG
TACAGTTCTCTGTCCCGATCAATGAGTTGAAAGTGGCCGTGGAAGAGCTG
GCTATGGGGAATGAGGTCCTGCATCCATCCATTGGGGTGGAGATGATGCC
CGTCACTCCCACCCTTGCTGCTCAGCTGAACCAGAAGGCAGCGGCAAGAC
AGCGGCAAATCCAGGTTGAGCAGGAGGAGAAGGCAGTGAAAGAGCTTGCG
GAGCAACAGGAGTTGCAACGAAAGGAGCAACAGCAACCGCAGCAGCAGCA
GGCAGAGAAGGGAGGAAAGGGCGCGAGAGGACAAAGAAAAAGAGGTGGAA
TGGAAAGGGGGAGAAGTGCCTTCTCTGAAATTTTGCGCAAAGCTCAACAA
GCAGGCAAGCACCTCCTCCAACAACCTCCACAAAACCACTACCCACCCTC
TCCCTCCCCCTCCCCTTCCCCGCCGTTTTCTCCTTCCACACCCTCCTCCT
CTTCCTCTTCTTCGTCCTCTTCCTCGCAAATCCATTTCATCCCCGAGGGG
GGCGCAGTGGTGGTCGTCAACGTTCTAGAAGATTCCCCTGCCCAACAAGC
AGGCCTGCAGCACTTGGACATTCTGCTTGAGATCGATCGATGCCCCATCT
ACAAGGTGGAAGATGCGCAAAGGATCATCCACGCGTCCGGGGTCGGGAGG
GACATAGAGATAAAGGTACTAAGAAGCACACAGGAAGTCACTGTGCAAGT
GAGGACGACTGATTTTTTGACTCTGTTTCGAAAGCAACAGACGGCCAAAA
GGTACCCTGAGCTGAAGCCAAAGGTGGAGAGGAAGAGGGAGGGATTGAAC
GAGGGGGGAAGGGAACAGTTGGAGAGGGAGGGGGACGGGGAAGAGCTGGA
GGAATCGCCGTTGGGAGGGAAGGGGGGGCTGCATCAGCGGTCGGCGAGTA
ATGATGGGAAGGGAGGAAATGAGAGAGGTGAAGAGAGAAAGAAGACGGGG
TTGATGAAACAGAGTAAGAAGGAGGAGAGGCAGATGAGGGAGGAGGAGGG
AGATAGACAGGCAACAAAAGATAGGGAAGCACCAGATGAGATGCATGGAG
AATTGTGGACTTAAATTAGGCGATCGCGTCTGTGGTTTTGGAGAAGAGAG
ACATCGTGAATATATACATATACATGTATTTTCTTACATACAAATCAAAT
TAAACCAGACTTGCCCGCAGCAGATAAAACAAATATCCTCATTTTCCCAC
AATCAATGGACCGATTAAAATTTGTTGGAACTTTTTTGTGGTTGCTCTTA
GGTTTAGTGACAAAACAACAGAAACAGAATCACGACACGTAAAATGAAAG
GAACAACTTTACATAGAGATGAGGATAGCGGATATTTGATCGGAGCTCGG
AACGAGAGGCAGTCTCTTTGTGGCAGCGCCTTGGCGAAAGCCATTGCGTT
CATGTCCCATACAGCGAAAGCAAATGCACTAATTTCAACTCCAATGATAA
A

Coding sequence (CDS) from alignment at chr4:1113940..1117490-

>NO04G04100.1 ID=NO04G04100.1|Name=NO04G04100.1|organism=Nannochloropsis oceanica|type=CDS|length=3078bp|location=Sequence derived from alignment at chr4:1113940..1117490- (Nannochloropsis oceanica)
ATGACAGCCTTCAGCACCTGTAGTCGCAGGCCCAGGTCACTTCAAGGCCA
AGCGTTGCTCGTCCTCGTCCTCGTCATCATCCTCGCGTTGTGCAGAGGAA
GAAAGACCCTGACGCCGTCAGTGGGGACGAGCGTGGGAGCGTTTGTGAGC
CGTTCAGACTTAGGATTCAAATCTCGCCAGCCATCAGCTTCCCCCTCAAA
GCGCCCGCTCATTGCCGCCACAGCCCTGCCAACTACCCTTTCACCTCATC
GCGCCCGCCTCGCCCCCCTCTCCGCAGGCATGTGGCGTTTCGATAAAGAG
CTGACCCAGCCTCAATCACAAGAGAATGGTGATGATTCGGGGTTTGATCC
GCCGGGAAAGGGAATCTTTCGGTTTGTGTGGGGGTTGCTAAAAAAACGCA
CGGTGCAAGCAATAGGCATAACGGCGTTCGCCCTCAGTGCAGTCAAAAAT
GGGGGCGGAGGAAGGAAAGCAGCGGGGGGAAAGGTTGGAATTCTGGATGG
TGGCGGAGCAGCGAATGCTCCGGAGCGGTATGTGAGAAGTAAGGATCCCG
ACGCCTCATCCAAACAGCAGCAGCGGGAGCAGGAGCAAGAGCAGCCGCAA
AAGCAGGAGCATAAAATAGCGGGAGCTGGAGCAGGAGCAGCATCTAAGTC
AGCTGCTGTGCCCCTGCCAGATGCTGAGTGCCCTATTTTGCCTCCGGACG
ACAGCAGTAGCGGCAGCAGCAGCAAGAAAGGAACTGCGGAAGAGCCAGCA
GTACCTGCAGCAGTACCATCGTCAGAGCAGCAGCAGCATCAGCAGCAGCA
GGACGGGGAAGCGTCAGGTACAGCTGCAGCAGATTCTCTTGCTCCCGAGA
TAAACAAAGAGGGAGGGAAGGAGGCCAGGTCACCTTGGACACCATTTAAG
AACTGGAGGAGCAAAGAGAGGGGGGCGAGGGAGGGAGAGAAGGTTGTACT
GCGGCAGGAGCAGCAGGAGCAGCAGCCACGGAAGGATAGAGAGGAAGCGG
TGGGAGAAGGTATTACACTCAATAGAGGGACAGCGAAAAAAGATGAGGGG
GCACCTGCGACAGATGACAGCAAGCAGGGCGAGCAGAGGGAAAATGTCCA
GGACCGCATCAACCCCGAAGAGGAGGAGGCGGAGGCTGAAGAGGAGGAGG
AGGTGGAGGAGGAGGAGGAGATGGAGGAGGATGGGGATGGCACCGTGCCA
TTTGATGAACGCGAATCTGCCCTTCTGGAGGATGGAGAGGCCTTCCTCGC
ACGCCGTGGGACTACTCAGCCCGGGCAAGCCGCCACCTCCGGTTCCCGTG
CCACCGGCAAGAAGAAGAACGACAACAACGACAAAAACGACAACAAACAA
AGCAAAAGGCAACAGCAGCAGCAAAAGCAGCAGCATGAGAAAAATAAACA
TCCCTCCGTCGTCCCAAGACCCGATTCTGGTGTCTCCTCCCCGTCTACCA
CCAAGCTCTCTATCCCCCCCTCCCTCCATCCCTCCCGGCCGGGGGGCTCC
TCCTCCTTTGTCTCAGGTGTGTTCCGCGCCATCGCCCCCGCCGTTCCGCG
CGTCGACTGCGTGAAAGTTTACAAGGGAGAAATAAAATTCGCCTCCGGTT
CGGGCGTTATTTTCACCCCGGAAGGGTATATGATAACCAATTCTCTTCTT
GTGCGGAACGCGTTGGAGTTGAAGGTGACACTTGCCGACGGTCGAGAATT
TCCCGCCGAGGTGAAGGGGGTGGATGAAGTCCTCGATGTGGCGGTGCTTA
AAATCCTTCCTCCCTCCCCCCTCCCTCGTCCTCGCGATTGGGTGCTATCG
GTGGGTAGCCCTCGTTCCCCCGGCCCTTCCGTCATCCTAGGCATTGTTAG
TGGCCTCACCAAAACAGCTGCAGAAGTGGGTCGGCCCGAGACGCAAGTCT
CCTTCATCCAAACAGACGCGAGTTTCGATGCAGGTGTTGTGGGAGGCCCC
CTGGTGAACGAGTACGGGGAGGTGGTGGGGATCAATAGCATCGGGCTCAC
CACCAGCAACACAGTACAGTTCTCTGTCCCGATCAATGAGTTGAAAGTGG
CCGTGGAAGAGCTGGCTATGGGGAATGAGGTCCTGCATCCATCCATTGGG
GTGGAGATGATGCCCGTCACTCCCACCCTTGCTGCTCAGCTGAACCAGAA
GGCAGCGGCAAGACAGCGGCAAATCCAGGTTGAGCAGGAGGAGAAGGCAG
TGAAAGAGCTTGCGGAGCAACAGGAGTTGCAACGAAAGGAGCAACAGCAA
CCGCAGCAGCAGCAGGCAGAGAAGGGAGGAAAGGGCGCGAGAGGACAAAG
AAAAAGAGGTGGAATGGAAAGGGGGAGAAGTGCCTTCTCTGAAATTTTGC
GCAAAGCTCAACAAGCAGGCAAGCACCTCCTCCAACAACCTCCACAAAAC
CACTACCCACCCTCTCCCTCCCCCTCCCCTTCCCCGCCGTTTTCTCCTTC
CACACCCTCCTCCTCTTCCTCTTCTTCGTCCTCTTCCTCGCAAATCCATT
TCATCCCCGAGGGGGGCGCAGTGGTGGTCGTCAACGTTCTAGAAGATTCC
CCTGCCCAACAAGCAGGCCTGCAGCACTTGGACATTCTGCTTGAGATCGA
TCGATGCCCCATCTACAAGGTGGAAGATGCGCAAAGGATCATCCACGCGT
CCGGGGTCGGGAGGGACATAGAGATAAAGGTACTAAGAAGCACACAGGAA
GTCACTGTGCAAGTGAGGACGACTGATTTTTTGACTCTGTTTCGAAAGCA
ACAGACGGCCAAAAGGTACCCTGAGCTGAAGCCAAAGGTGGAGAGGAAGA
GGGAGGGATTGAACGAGGGGGGAAGGGAACAGTTGGAGAGGGAGGGGGAC
GGGGAAGAGCTGGAGGAATCGCCGTTGGGAGGGAAGGGGGGGCTGCATCA
GCGGTCGGCGAGTAATGATGGGAAGGGAGGAAATGAGAGAGGTGAAGAGA
GAAAGAAGACGGGGTTGATGAAACAGAGTAAGAAGGAGGAGAGGCAGATG
AGGGAGGAGGAGGGAGATAGACAGGCAACAAAAGATAGGGAAGCACCAGA
TGAGATGCATGGAGAATTGTGGACTTAA

Synonyms

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