NO12G02540.1, NO12G02540.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO12G02540.1
Unique Name	NO12G02540.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3081
Alignment location	chr12:722496..725576 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr12	genome	chr12:722496..725576 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO12G02540.1 vs.
Match: EWM25777.1 (hypothetical protein Naga_100176g5 [Nannochloropsis gaditana])

HSP 1 Score: 531.9 bits (1369), Expect = 4.200e-147
Identity = 392/1022 (38.36%), Postives = 546/1022 (53.42%), Query Frame = 0

Query:   13 MLAMDTQGLQRDRLLHVRVLREREAEGQANDASVIVTKGRFSEEKRRFIERSETFTLPAGSSDPCNIKVLALDQVLNHMSNRLCICFVVRAETCKNATLALCRLVEGDDADNVIQPEKGGGGSGRRSKRVIWEVLEGGDEAWSVDTFNFAVVPGPCILAWKPVYESSNKQGPRVHCWYRKKWHVYPLRTASDATDDIVNISFQGSSTQIDGGFIFRVKSHLSPSTFAWSVLELPPFSTASSSSSTTFSSSSDHINTANFPSSPYTWLPASALEGCACVCEPLA-FNFNNDQDTNFSGVYMASSTELSFLSSSHKPPEEPVCLAQFPSLSRPA-RACALLARPQPHENAPAAAENEKETTNAEVIEHVVVLFGGDAQDPVGRLMLFARVCFYNLNKHKHHHRQVKEQQEQGEEKQELHPLREFQGLAGMLRGDFLGYGWDQLALLPSSSSTLDG--------MGEVALTDLVHVWGPAGHCKLEDAPVKLLEDKAAFRAADKARKKAAAAAFTSKGGGHENTQVRTTKKKKKKMKKGEKRHLVEERFVAEEKRDWKDGEESGAAAAAPTEAEGETKERVLGKIRDALRQRLHDEEAEKRGLAQVEAQKRLLLMESERILTSMAYQDVLPSTSRLEDVGGDGGSGCGGDGGVGEGEGIVGSTTFAASLRPLLKASDGSDKEQAAFCGQRQAAPLFPIASHQIVRQEVDADSQRVALEVILFLSHKSRRLRLEELSLAVFSQHGPVTFTSSTIKDSGNAITTGHKTGNDEEVRQCVRLQVTFTLSAAALLDPLTWVGEVTLCCAWRRLTWKEGENEEVEEEEMVYPPGAQPLEQLTFCAREFDGASISSGISSSRCTIGGEDLSFSSSSSSSSSSISPLLWRLEATVLSSCANLSIPLSWSSRIASARLDPMESTYHLAAIDLPTLCTTLHNILKQTHKQTSSPSSSSFSSSTCSLVPSDLI--QPASSFLRGLAWAVALLQEELELLCTLVEGGEPKAGTIRDVWLAQPALDMAVYVLANLCLL 1023
            ML +D+QGL+ DRLLHV  L+ ++   ++++ SV VTKGRFS ++RRFIER + F++   +S      VLA +QV+N+++    +CFV+  E         C        D      +  GG GR S+R+    L GG      D  +  +V GP I  WK V  +S  +G RV  W   KW  Y L    +      +I+FQG    ++G ++FR +   S ST+ WSV+   P  +AS                    + PY WLP +AL  CAC+CEP   ++    +D   + +Y+ S+ ELSF +SSH PPE P+C A   + + PA + CALL R          A + +   +   IE VVVL    A+DP  RL+LF                 V+     G +KQEL PLREF G+ G+LRGDFLG GW+QLALLP  S             M E ALTDLVHVW      KL+DAP KL EDK   R+A K R  AA      +GG                        LV    +  E    K       A     E   E +ERVL K R+A+R+RL  EE  +R L +  A  +LLL E + +LT MAY+DVLP                       E EG+    +FAASL PL   + G ++    +   R A+PL P+A+H+I+ Q +DAD+ R++L++ L L+  +R +RL+ ++LAVFS+ GP+TFTSSTI DS     T  K G +++    +RL V+F +SAA+LL+P +W G VTLCCAWR LTW+ GE+E+  EE + YPPGAQ L++LT  A +     ++S   +   + GG++L  S           PLLW+L+A VLS        +S SSR+A+  LD + +T H+AA+DLPTLC TL ++++Q  +   +      SS    LVP+DL      S FL+GL   + LLQ+E +L+CTLVEGG+P+  +IRDVWLAQPALD+ V+VL+ LCLL
Sbjct:   15 MLVIDSQGLRTDRLLHVE-LQTQDGGSKSSELSVRVTKGRFSVDRRRFIERGDEFSMD-NASIKGKFNVLAFNQVVNYVTGCGVVCFVLHIEGRDGPCELYC-------LDRESAAGEKAGGQGRPSQRLTCTTLSGGMPLPPND-LSMEIVAGPRIFVWKDVQTTS--KGARVSSWLEGKWTEYSLY--GEERQGCGSITFQGIYPPVEGSYLFRTELLSSSSTYLWSVILPAPSESASVPPDKP---------GLLLAAPPYPWLPKAALSDCACLCEPAGDWHSEGTEDATTASLYIVSTHELSFHASSHLPPERPLCRACLDTSTGPATQVCALLTR----------ACDAEGRLDESAIEQVVVLM---ARDPRMRLLLF-----------------VRRHSGPGAQKQELQPLREFCGVGGILRGDFLGSGWEQLALLPGRSQGGPASAPRRPWRMAEAALTDLVHVWVHKASLKLQDAPDKLFEDKEGLRSAGKKRGVAAGCPANEEGG-----------------------ELVAP--IGREMERDKPARNGANAQRRGCEGSIEQEERVLCKFREAVRERLASEERRERRLQKTTAGSQLLLREGQAVLTDMAYKDVLPHVVVPPHAE--------------ESEGL----SFAASLEPL--GARGQEEASNDWRDSR-ASPLLPVATHRIMHQYLDADAHRISLDLSLRLAEPAR-VRLQHVALAVFSRDGPLTFTSSTISDS----LTHEKGGANKDE---LRLAVSFLVSAASLLNPTSWEGSVTLCCAWRTLTWR-GESED--EEPLAYPPGAQALQRLTVSASDL----LASSFRAKHDSDGGQNLLTSL----------PLLWKLDALVLSPLLAPKDSVSLSSRLAAVHLDAVRNTCHVAAVDLPTLCITLRSLVEQNQEDRLN-----ISSCPLKLVPADLSGRNRKSCFLKGLMLFLKLLQQEFDLICTLVEGGQPEESSIRDVWLAQPALDVTVHVLSKLCLL 907

The following BLAST results are available for this feature:

BLAST of NO12G02540.1 vs.

BLAST of NO12G02540.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM25777.1	4.200e-147	38.36	hypothetical protein Naga_100176g5 [Nannochloropsi...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO12G02540	NO12G02540	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO12G02540.1	NO12G02540.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO12G02540.1.cds1	NO12G02540.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr12:722496..725576-
coding sequence from alignment at chr12:722496..725576-

mRNA sequence

>NO12G02540.1 ID=NO12G02540.1|Name=NO12G02540.1|organism=Nannochloropsis oceanica|type=mRNA|length=3081bp
ATGGCAGCCTGCTTACCCCATGCATTGCACTCCATGATGCTGGCTATGGA
CACTCAAGGCCTGCAAAGGGATCGGCTCTTGCATGTGCGCGTCCTTCGCG
AGAGAGAAGCTGAAGGTCAAGCCAATGATGCTTCTGTGATAGTTACCAAG
GGACGATTCAGTGAGGAGAAGCGGCGCTTCATTGAACGCAGCGAGACCTT
CACTCTGCCTGCTGGTTCTTCTGACCCATGCAACATAAAAGTACTCGCAT
TGGACCAAGTTCTTAATCATATGAGTAATCGACTATGCATATGCTTCGTA
GTCCGTGCAGAAACGTGTAAGAACGCTACTTTGGCACTCTGTCGGCTGGT
GGAGGGCGACGACGCGGACAACGTTATACAGCCAGAAAAAGGTGGCGGGG
GCAGTGGCCGGCGCTCAAAGCGCGTGATATGGGAGGTATTGGAAGGGGGG
GATGAGGCGTGGTCTGTGGACACATTTAACTTTGCAGTGGTGCCAGGGCC
GTGTATTTTGGCGTGGAAACCTGTGTACGAGAGCTCGAACAAGCAAGGCC
CCCGCGTGCACTGTTGGTACAGGAAGAAATGGCATGTGTACCCACTACGC
ACAGCGAGTGATGCGACGGACGACATCGTCAATATCTCATTTCAGGGGAG
CAGTACGCAAATCGATGGCGGTTTTATTTTTCGGGTGAAGTCGCATTTGT
CTCCATCCACCTTTGCGTGGAGCGTCCTCGAGCTGCCGCCTTTCTCCACT
GCCTCCTCTTCTTCCTCCACCACCTTTTCTTCATCATCCGACCATATCAA
CACCGCCAACTTTCCCTCTTCGCCCTACACGTGGCTTCCAGCATCCGCTT
TGGAAGGCTGCGCTTGTGTATGTGAGCCACTAGCGTTCAATTTCAACAAC
GACCAGGACACTAATTTCTCTGGGGTTTATATGGCCAGCAGCACTGAGCT
CTCTTTCCTCTCCTCTTCTCACAAGCCGCCCGAAGAACCTGTGTGTCTCG
CTCAATTCCCATCTCTCTCCCGACCGGCGCGGGCATGTGCATTGTTGGCC
CGACCACAACCACACGAGAACGCTCCTGCCGCCGCTGAGAATGAGAAGGA
GACGACGAATGCGGAAGTTATAGAACACGTGGTCGTCCTCTTCGGCGGCG
ATGCCCAGGACCCCGTAGGACGGCTCATGCTTTTTGCCCGCGTCTGTTTT
TACAATCTGAATAAGCATAAGCACCACCATCGACAAGTAAAAGAACAACA
AGAACAAGGAGAAGAAAAACAAGAACTACATCCCCTCCGAGAATTCCAGG
GCCTTGCTGGCATGTTGCGTGGTGATTTTTTGGGATACGGCTGGGACCAG
CTAGCCCTCCTTCCCTCTTCTTCCTCGACTTTGGATGGCATGGGTGAGGT
AGCCCTTACCGACCTAGTGCACGTTTGGGGGCCAGCAGGTCATTGCAAAT
TAGAAGATGCGCCAGTGAAGCTCTTGGAAGACAAAGCTGCATTTCGTGCC
GCGGATAAGGCGAGAAAAAAGGCGGCAGCAGCAGCATTCACATCGAAAGG
AGGAGGTCATGAAAACACACAGGTACGTACGACGAAAAAAAAAAAGAAGA
AGATGAAGAAGGGGGAAAAGCGGCATTTGGTAGAGGAGCGATTTGTAGCG
GAAGAAAAGAGAGATTGGAAAGATGGAGAAGAAAGTGGAGCAGCAGCAGC
AGCTCCAACAGAAGCAGAGGGAGAGACGAAGGAACGAGTACTGGGCAAGA
TCCGAGACGCCTTGCGGCAGCGGTTGCATGACGAGGAAGCCGAGAAACGC
GGGTTAGCGCAGGTAGAGGCGCAAAAGCGACTTTTGTTAATGGAAAGTGA
GAGAATCCTGACCTCTATGGCTTATCAAGACGTCCTTCCCTCTACATCTA
GACTGGAAGATGTTGGTGGCGATGGTGGTAGTGGTTGTGGTGGTGATGGG
GGTGTAGGTGAAGGAGAAGGAATAGTCGGTTCAACGACATTTGCCGCCAG
CTTGCGGCCTCTTTTAAAGGCTAGTGATGGGAGCGACAAAGAGCAAGCGG
CATTCTGTGGACAACGACAGGCTGCGCCTTTGTTCCCCATCGCCAGTCAT
CAGATAGTACGGCAAGAGGTTGATGCGGACTCTCAGCGCGTGGCCCTTGA
AGTGATACTGTTTCTTAGTCACAAATCCCGTCGTCTGCGCTTGGAGGAGC
TTTCTCTCGCAGTGTTTTCACAGCATGGCCCTGTGACATTTACGTCCTCC
ACTATCAAAGATAGCGGCAATGCTATCACCACTGGGCACAAAACCGGAAA
TGACGAGGAAGTAAGACAGTGCGTGCGTTTGCAGGTGACTTTCACTCTGT
CCGCTGCGGCTTTGCTGGACCCTTTGACGTGGGTCGGCGAAGTGACTCTG
TGCTGTGCATGGCGCCGGTTGACCTGGAAGGAGGGGGAGAATGAGGAAGT
GGAGGAGGAAGAGATGGTTTATCCGCCCGGTGCCCAACCATTGGAGCAGC
TGACATTCTGTGCCCGGGAGTTTGACGGCGCAAGTATTAGCAGCGGCATC
AGTAGCAGCAGGTGCACAATCGGCGGTGAAGACCTCAGCTTCTCTTCTTC
CTCCTCCTCTTCCTCCTCCTCCATATCGCCTCTTCTCTGGAGGCTCGAAG
CCACCGTGTTGTCGTCTTGCGCTAATCTATCCATCCCCCTCTCCTGGTCC
TCACGTATTGCCTCGGCCCGTCTTGACCCAATGGAGAGCACATACCACCT
GGCAGCCATTGATCTCCCCACGCTTTGCACCACTCTCCATAATATTTTGA
AGCAGACACACAAGCAAACCTCCTCTCCCTCCTCTTCCTCCTTCTCCTCC
TCCACGTGTTCTCTCGTGCCCTCGGACCTCATCCAACCCGCATCATCCTT
TCTTCGAGGCCTAGCCTGGGCTGTGGCATTGCTGCAAGAGGAGCTGGAGT
TGTTGTGTACGTTGGTGGAAGGCGGGGAGCCCAAGGCCGGGACTATACGG
GACGTGTGGCTAGCCCAGCCGGCCTTGGACATGGCCGTGTACGTGCTGGC
TAATTTATGCTTGTTGAGCCGACTTGATTGA

protein sequence of NO12G02540.1

>NO12G02540.1-protein ID=NO12G02540.1-protein|Name=NO12G02540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1027bp
MAACLPHALHSMMLAMDTQGLQRDRLLHVRVLREREAEGQANDASVIVTK
GRFSEEKRRFIERSETFTLPAGSSDPCNIKVLALDQVLNHMSNRLCICFV
VRAETCKNATLALCRLVEGDDADNVIQPEKGGGGSGRRSKRVIWEVLEGG
DEAWSVDTFNFAVVPGPCILAWKPVYESSNKQGPRVHCWYRKKWHVYPLR
TASDATDDIVNISFQGSSTQIDGGFIFRVKSHLSPSTFAWSVLELPPFST
ASSSSSTTFSSSSDHINTANFPSSPYTWLPASALEGCACVCEPLAFNFNN
DQDTNFSGVYMASSTELSFLSSSHKPPEEPVCLAQFPSLSRPARACALLA
RPQPHENAPAAAENEKETTNAEVIEHVVVLFGGDAQDPVGRLMLFARVCF
YNLNKHKHHHRQVKEQQEQGEEKQELHPLREFQGLAGMLRGDFLGYGWDQ
LALLPSSSSTLDGMGEVALTDLVHVWGPAGHCKLEDAPVKLLEDKAAFRA
ADKARKKAAAAAFTSKGGGHENTQVRTTKKKKKKMKKGEKRHLVEERFVA
EEKRDWKDGEESGAAAAAPTEAEGETKERVLGKIRDALRQRLHDEEAEKR
GLAQVEAQKRLLLMESERILTSMAYQDVLPSTSRLEDVGGDGGSGCGGDG
GVGEGEGIVGSTTFAASLRPLLKASDGSDKEQAAFCGQRQAAPLFPIASH
QIVRQEVDADSQRVALEVILFLSHKSRRLRLEELSLAVFSQHGPVTFTSS
TIKDSGNAITTGHKTGNDEEVRQCVRLQVTFTLSAAALLDPLTWVGEVTL
CCAWRRLTWKEGENEEVEEEEMVYPPGAQPLEQLTFCAREFDGASISSGI
SSSRCTIGGEDLSFSSSSSSSSSSISPLLWRLEATVLSSCANLSIPLSWS
SRIASARLDPMESTYHLAAIDLPTLCTTLHNILKQTHKQTSSPSSSSFSS
STCSLVPSDLIQPASSFLRGLAWAVALLQEELELLCTLVEGGEPKAGTIR
DVWLAQPALDMAVYVLANLCLLSRLD*

mRNA from alignment at chr12:722496..725576-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO12G02540.1 ID=NO12G02540.1|Name=NO12G02540.1|organism=Nannochloropsis oceanica|type=mRNA|length=3081bp|location=Sequence derived from alignment at chr12:722496..725576- (Nannochloropsis oceanica)
ATGGCAGCCTGCTTACCCCATGCATTGCACTCCATGATGCTGGCTATGGA
CACTCAAGGCCTGCAAAGGGATCGGCTCTTGCATGTGCGCGTCCTTCGCG
AGAGAGAAGCTGAAGGTCAAGCCAATGATGCTTCTGTGATAGTTACCAAG
GGACGATTCAGTGAGGAGAAGCGGCGCTTCATTGAACGCAGCGAGACCTT
CACTCTGCCTGCTGGTTCTTCTGACCCATGCAACATAAAAGTACTCGCAT
TGGACCAAGTTCTTAATCATATGAGTAATCGACTATGCATATGCTTCGTA
GTCCGTGCAGAAACGTGTAAGAACGCTACTTTGGCACTCTGTCGGCTGGT
GGAGGGCGACGACGCGGACAACGTTATACAGCCAGAAAAAGGTGGCGGGG
GCAGTGGCCGGCGCTCAAAGCGCGTGATATGGGAGGTATTGGAAGGGGGG
GATGAGGCGTGGTCTGTGGACACATTTAACTTTGCAGTGGTGCCAGGGCC
GTGTATTTTGGCGTGGAAACCTGTGTACGAGAGCTCGAACAAGCAAGGCC
CCCGCGTGCACTGTTGGTACAGGAAGAAATGGCATGTGTACCCACTACGC
ACAGCGAGTGATGCGACGGACGACATCGTCAATATCTCATTTCAGGGGAG
CAGTACGCAAATCGATGGCGGTTTTATTTTTCGGGTGAAGTCGCATTTGT
CTCCATCCACCTTTGCGTGGAGCGTCCTCGAGCTGCCGCCTTTCTCCACT
GCCTCCTCTTCTTCCTCCACCACCTTTTCTTCATCATCCGACCATATCAA
CACCGCCAACTTTCCCTCTTCGCCCTACACGTGGCTTCCAGCATCCGCTT
TGGAAGGCTGCGCTTGTGTATGTGAGCCACTAGCGTTCAATTTCAACAAC
GACCAGGACACTAATTTCTCTGGGGTTTATATGGCCAGCAGCACTGAGCT
CTCTTTCCTCTCCTCTTCTCACAAGCCGCCCGAAGAACCTGTGTGTCTCG
CTCAATTCCCATCTCTCTCCCGACCGGCGCGGGCATGTGCATTGTTGGCC
CGACCACAACCACACGAGAACGCTCCTGCCGCCGCTGAGAATGAGAAGGA
GACGACGAATGCGGAAGTTATAGAACACGTGGTCGTCCTCTTCGGCGGCG
ATGCCCAGGACCCCGTAGGACGGCTCATGCTTTTTGCCCGCGTCTGTTTT
TACAATCTGAATAAGCATAAGCACCACCATCGACAAGTAAAAGAACAACA
AGAACAAGGAGAAGAAAAACAAGAACTACATCCCCTCCGAGAATTCCAGG
GCCTTGCTGGCATGTTGCGTGGTGATTTTTTGGGATACGGCTGGGACCAG
CTAGCCCTCCTTCCCTCTTCTTCCTCGACTTTGGATGGCATGGGTGAGGT
AGCCCTTACCGACCTAGTGCACGTTTGGGGGCCAGCAGGTCATTGCAAAT
TAGAAGATGCGCCAGTGAAGCTCTTGGAAGACAAAGCTGCATTTCGTGCC
GCGGATAAGGCGAGAAAAAAGGCGGCAGCAGCAGCATTCACATCGAAAGG
AGGAGGTCATGAAAACACACAGGTACGTACGACGAAAAAAAAAAAGAAGA
AGATGAAGAAGGGGGAAAAGCGGCATTTGGTAGAGGAGCGATTTGTAGCG
GAAGAAAAGAGAGATTGGAAAGATGGAGAAGAAAGTGGAGCAGCAGCAGC
AGCTCCAACAGAAGCAGAGGGAGAGACGAAGGAACGAGTACTGGGCAAGA
TCCGAGACGCCTTGCGGCAGCGGTTGCATGACGAGGAAGCCGAGAAACGC
GGGTTAGCGCAGGTAGAGGCGCAAAAGCGACTTTTGTTAATGGAAAGTGA
GAGAATCCTGACCTCTATGGCTTATCAAGACGTCCTTCCCTCTACATCTA
GACTGGAAGATGTTGGTGGCGATGGTGGTAGTGGTTGTGGTGGTGATGGG
GGTGTAGGTGAAGGAGAAGGAATAGTCGGTTCAACGACATTTGCCGCCAG
CTTGCGGCCTCTTTTAAAGGCTAGTGATGGGAGCGACAAAGAGCAAGCGG
CATTCTGTGGACAACGACAGGCTGCGCCTTTGTTCCCCATCGCCAGTCAT
CAGATAGTACGGCAAGAGGTTGATGCGGACTCTCAGCGCGTGGCCCTTGA
AGTGATACTGTTTCTTAGTCACAAATCCCGTCGTCTGCGCTTGGAGGAGC
TTTCTCTCGCAGTGTTTTCACAGCATGGCCCTGTGACATTTACGTCCTCC
ACTATCAAAGATAGCGGCAATGCTATCACCACTGGGCACAAAACCGGAAA
TGACGAGGAAGTAAGACAGTGCGTGCGTTTGCAGGTGACTTTCACTCTGT
CCGCTGCGGCTTTGCTGGACCCTTTGACGTGGGTCGGCGAAGTGACTCTG
TGCTGTGCATGGCGCCGGTTGACCTGGAAGGAGGGGGAGAATGAGGAAGT
GGAGGAGGAAGAGATGGTTTATCCGCCCGGTGCCCAACCATTGGAGCAGC
TGACATTCTGTGCCCGGGAGTTTGACGGCGCAAGTATTAGCAGCGGCATC
AGTAGCAGCAGGTGCACAATCGGCGGTGAAGACCTCAGCTTCTCTTCTTC
CTCCTCCTCTTCCTCCTCCTCCATATCGCCTCTTCTCTGGAGGCTCGAAG
CCACCGTGTTGTCGTCTTGCGCTAATCTATCCATCCCCCTCTCCTGGTCC
TCACGTATTGCCTCGGCCCGTCTTGACCCAATGGAGAGCACATACCACCT
GGCAGCCATTGATCTCCCCACGCTTTGCACCACTCTCCATAATATTTTGA
AGCAGACACACAAGCAAACCTCCTCTCCCTCCTCTTCCTCCTTCTCCTCC
TCCACGTGTTCTCTCGTGCCCTCGGACCTCATCCAACCCGCATCATCCTT
TCTTCGAGGCCTAGCCTGGGCTGTGGCATTGCTGCAAGAGGAGCTGGAGT
TGTTGTGTACGTTGGTGGAAGGCGGGGAGCCCAAGGCCGGGACTATACGG
GACGTGTGGCTAGCCCAGCCGGCCTTGGACATGGCCGTGTACGTGCTGGC
TAATTTATGCTTGTTGAGCCGACTTGATTGA

Coding sequence (CDS) from alignment at chr12:722496..725576-

>NO12G02540.1 ID=NO12G02540.1|Name=NO12G02540.1|organism=Nannochloropsis oceanica|type=CDS|length=3081bp|location=Sequence derived from alignment at chr12:722496..725576- (Nannochloropsis oceanica)
ATGGCAGCCTGCTTACCCCATGCATTGCACTCCATGATGCTGGCTATGGA
CACTCAAGGCCTGCAAAGGGATCGGCTCTTGCATGTGCGCGTCCTTCGCG
AGAGAGAAGCTGAAGGTCAAGCCAATGATGCTTCTGTGATAGTTACCAAG
GGACGATTCAGTGAGGAGAAGCGGCGCTTCATTGAACGCAGCGAGACCTT
CACTCTGCCTGCTGGTTCTTCTGACCCATGCAACATAAAAGTACTCGCAT
TGGACCAAGTTCTTAATCATATGAGTAATCGACTATGCATATGCTTCGTA
GTCCGTGCAGAAACGTGTAAGAACGCTACTTTGGCACTCTGTCGGCTGGT
GGAGGGCGACGACGCGGACAACGTTATACAGCCAGAAAAAGGTGGCGGGG
GCAGTGGCCGGCGCTCAAAGCGCGTGATATGGGAGGTATTGGAAGGGGGG
GATGAGGCGTGGTCTGTGGACACATTTAACTTTGCAGTGGTGCCAGGGCC
GTGTATTTTGGCGTGGAAACCTGTGTACGAGAGCTCGAACAAGCAAGGCC
CCCGCGTGCACTGTTGGTACAGGAAGAAATGGCATGTGTACCCACTACGC
ACAGCGAGTGATGCGACGGACGACATCGTCAATATCTCATTTCAGGGGAG
CAGTACGCAAATCGATGGCGGTTTTATTTTTCGGGTGAAGTCGCATTTGT
CTCCATCCACCTTTGCGTGGAGCGTCCTCGAGCTGCCGCCTTTCTCCACT
GCCTCCTCTTCTTCCTCCACCACCTTTTCTTCATCATCCGACCATATCAA
CACCGCCAACTTTCCCTCTTCGCCCTACACGTGGCTTCCAGCATCCGCTT
TGGAAGGCTGCGCTTGTGTATGTGAGCCACTAGCGTTCAATTTCAACAAC
GACCAGGACACTAATTTCTCTGGGGTTTATATGGCCAGCAGCACTGAGCT
CTCTTTCCTCTCCTCTTCTCACAAGCCGCCCGAAGAACCTGTGTGTCTCG
CTCAATTCCCATCTCTCTCCCGACCGGCGCGGGCATGTGCATTGTTGGCC
CGACCACAACCACACGAGAACGCTCCTGCCGCCGCTGAGAATGAGAAGGA
GACGACGAATGCGGAAGTTATAGAACACGTGGTCGTCCTCTTCGGCGGCG
ATGCCCAGGACCCCGTAGGACGGCTCATGCTTTTTGCCCGCGTCTGTTTT
TACAATCTGAATAAGCATAAGCACCACCATCGACAAGTAAAAGAACAACA
AGAACAAGGAGAAGAAAAACAAGAACTACATCCCCTCCGAGAATTCCAGG
GCCTTGCTGGCATGTTGCGTGGTGATTTTTTGGGATACGGCTGGGACCAG
CTAGCCCTCCTTCCCTCTTCTTCCTCGACTTTGGATGGCATGGGTGAGGT
AGCCCTTACCGACCTAGTGCACGTTTGGGGGCCAGCAGGTCATTGCAAAT
TAGAAGATGCGCCAGTGAAGCTCTTGGAAGACAAAGCTGCATTTCGTGCC
GCGGATAAGGCGAGAAAAAAGGCGGCAGCAGCAGCATTCACATCGAAAGG
AGGAGGTCATGAAAACACACAGGTACGTACGACGAAAAAAAAAAAGAAGA
AGATGAAGAAGGGGGAAAAGCGGCATTTGGTAGAGGAGCGATTTGTAGCG
GAAGAAAAGAGAGATTGGAAAGATGGAGAAGAAAGTGGAGCAGCAGCAGC
AGCTCCAACAGAAGCAGAGGGAGAGACGAAGGAACGAGTACTGGGCAAGA
TCCGAGACGCCTTGCGGCAGCGGTTGCATGACGAGGAAGCCGAGAAACGC
GGGTTAGCGCAGGTAGAGGCGCAAAAGCGACTTTTGTTAATGGAAAGTGA
GAGAATCCTGACCTCTATGGCTTATCAAGACGTCCTTCCCTCTACATCTA
GACTGGAAGATGTTGGTGGCGATGGTGGTAGTGGTTGTGGTGGTGATGGG
GGTGTAGGTGAAGGAGAAGGAATAGTCGGTTCAACGACATTTGCCGCCAG
CTTGCGGCCTCTTTTAAAGGCTAGTGATGGGAGCGACAAAGAGCAAGCGG
CATTCTGTGGACAACGACAGGCTGCGCCTTTGTTCCCCATCGCCAGTCAT
CAGATAGTACGGCAAGAGGTTGATGCGGACTCTCAGCGCGTGGCCCTTGA
AGTGATACTGTTTCTTAGTCACAAATCCCGTCGTCTGCGCTTGGAGGAGC
TTTCTCTCGCAGTGTTTTCACAGCATGGCCCTGTGACATTTACGTCCTCC
ACTATCAAAGATAGCGGCAATGCTATCACCACTGGGCACAAAACCGGAAA
TGACGAGGAAGTAAGACAGTGCGTGCGTTTGCAGGTGACTTTCACTCTGT
CCGCTGCGGCTTTGCTGGACCCTTTGACGTGGGTCGGCGAAGTGACTCTG
TGCTGTGCATGGCGCCGGTTGACCTGGAAGGAGGGGGAGAATGAGGAAGT
GGAGGAGGAAGAGATGGTTTATCCGCCCGGTGCCCAACCATTGGAGCAGC
TGACATTCTGTGCCCGGGAGTTTGACGGCGCAAGTATTAGCAGCGGCATC
AGTAGCAGCAGGTGCACAATCGGCGGTGAAGACCTCAGCTTCTCTTCTTC
CTCCTCCTCTTCCTCCTCCTCCATATCGCCTCTTCTCTGGAGGCTCGAAG
CCACCGTGTTGTCGTCTTGCGCTAATCTATCCATCCCCCTCTCCTGGTCC
TCACGTATTGCCTCGGCCCGTCTTGACCCAATGGAGAGCACATACCACCT
GGCAGCCATTGATCTCCCCACGCTTTGCACCACTCTCCATAATATTTTGA
AGCAGACACACAAGCAAACCTCCTCTCCCTCCTCTTCCTCCTTCTCCTCC
TCCACGTGTTCTCTCGTGCCCTCGGACCTCATCCAACCCGCATCATCCTT
TCTTCGAGGCCTAGCCTGGGCTGTGGCATTGCTGCAAGAGGAGCTGGAGT
TGTTGTGTACGTTGGTGGAAGGCGGGGAGCCCAAGGCCGGGACTATACGG
GACGTGTGGCTAGCCCAGCCGGCCTTGGACATGGCCGTGTACGTGCTGGC
TAATTTATGCTTGTTGAGCCGACTTGATTGA

Synonyms

Publications