|
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr12 | genome | chr12:279249..280737 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO12G00850.1 ID=NO12G00850.1|Name=NO12G00850.1|organism=Nannochloropsis oceanica|type=mRNA|length=1260bp ATGTCTCTCCTCCCGCTGAGGAGGTCCTGTGCTCAATCTGCATGCAGGTC CTCCATCGACCCCTCACCAGGCCCTGCAACCACATCTTCTGTCTCAACTG CATTCATAACTGGGCTACATGTTGCAAGAAACGAGGCAGTTGTTGAAGAG GCGCAGAAACAGCAGCCGCAGCCGCAGCAGCAGTCGCAGCAGCAGCAACA GCAGCAGGGTTTGAATGTCAGAGCGCCTACTGCCTCTCGTCAACGTAGGT GGCAGGTGCCGAGAGGGCAAGTGCAAAATGCGAGTCGTGTGAGAAAGAGA ATCACAAGTTACACCTGCAGTAGCAGCAGCAGCAGCAGCAGTAGCAGCAG TAGCAGCAGTAGCATATTTACTCAACAGCGGCAAGAGCAGCAGCTGCTTC AAGAAAAGGAACATCAAGCATACCATTGGTCACACCACCGTCCTGTCCAG ACCCCCACCGCTCGATCTGGCTTCAAAAGCGGCACCAGCAAAAGCAGCAA AAGCAAGAATGCCAACAGCAGTAGCGGTAGCTCCGGCAGCAGAAGCCTTC CCAGCTTACTTTCTTCTCCTCATCGATACATGCGGGAGCTGGAGGAGCAA TGCTTACTGACATCACAAGACCACGGCGCCGGACTTTCATGGCCACTGAA GATTTTCCCGCTGGCATCATTTACTCCTTTATCTTATAGCATCATTACCA ACAGCAGTAGTAGTAGCAGCATCAGAAGTTGTAGCGATATTAACAGCCGC AGCATTTTCCGATTTGGACAAAAGCTGAAGTGCAGTCCTTCTTCCTGCCC GGGGAGTGCGCAGCCTATCATCTTCGCCCTCTCTTCACAAACACCTTTCC AGCCGAAACCGTTTCTCGTCTTTGCTTCACGGGATTCTGTGCACGTTTTT CTTCTCTTCCTCTTCCTTCTCGCGTGGCGACGGTCTGTAGCAGCAGAAGT AAGGGTCGTTGCACCACTAGAAGAGTGCTCGCACTTCCAGCAACAACAGC AGGAACAGCAGTTGGGGCAGCACCCTCGCCTTGAGGGGAGGGGCTCGTCA AGGTCCTTTTCTCTCTTCACCCCGTCTCCCTCCTCATCTTCATTTTCAAA CAGCACCATATCATCGCCCGCAGCATCCTCCTCCTTCTCCTCTTCCTCCT CCTCCCCCTCAATCTTCTCTTTCTCCCCCTTCTCTCCATCGTCGCCGCTA TTAAAGCCTTATTGTATTTGCCTTAGGACGGACACGACCACCAGCGTTTA TCTTTGGTGA back to topprotein sequence of NO12G00850.1 >NO12G00850.1-protein ID=NO12G00850.1-protein|Name=NO12G00850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=420bp MSLLPLRRSCAQSACRSSIDPSPGPATTSSVSTAFITGLHVARNEAVVEE AQKQQPQPQQQSQQQQQQQGLNVRAPTASRQRRWQVPRGQVQNASRVRKR ITSYTCSSSSSSSSSSSSSSSIFTQQRQEQQLLQEKEHQAYHWSHHRPVQ TPTARSGFKSGTSKSSKSKNANSSSGSSGSRSLPSLLSSPHRYMRELEEQ CLLTSQDHGAGLSWPLKIFPLASFTPLSYSIITNSSSSSSIRSCSDINSR SIFRFGQKLKCSPSSCPGSAQPIIFALSSQTPFQPKPFLVFASRDSVHVF LLFLFLLAWRRSVAAEVRVVAPLEECSHFQQQQQEQQLGQHPRLEGRGSS RSFSLFTPSPSSSSFSNSTISSPAASSSFSSSSSSPSIFSFSPFSPSSPL LKPYCICLRTDTTTSVYLW* back to topmRNA from alignment at chr12:279249..280737+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO12G00850.1 ID=NO12G00850.1|Name=NO12G00850.1|organism=Nannochloropsis oceanica|type=mRNA|length=1489bp|location=Sequence derived from alignment at chr12:279249..280737+ (Nannochloropsis oceanica) ATGTCTCTCCTCCCGCTGAGGAGGTCCTGTGCTCAATCTGCATGCAGGTC
CTCCATCGACCCCTCACCAGGCCCTGCAACCACATCTTCTGTCTCAACTG
CATTCATAACTGGGCTACGTAAGCATCCCACGTGTCCCTTCGATCGCTCC
GAGCTCAAGCGTGATGACCTCAGGCCTGCCTCTGATGATATGCAAGCGAT
TCTCCAGGCCCTAGACTGTCCGGTGTCCCATCCATTAAGATCGGTGCTAC
TTCATTGTCGACTCAAAGACTTGCTTGCGCGCACACATACAACTTGAATG
TCGGGTGCCTAAATGGCTTAAGCCCTGGCCCTGTGTCGCCACGACAGATG
TTGCAAGAAACGAGGCAGTTGTTGAAGAGGCGCAGAAACAGCAGCCGCAG
CCGCAGCAGCAGTCGCAGCAGCAGCAACAGCAGCAGGGTTTGAATGTCAG
AGCGCCTACTGCCTCTCGTCAACGTAGGTGGCAGGTGCCGAGAGGGCAAG
TGCAAAATGCGAGTCGTGTGAGAAAGAGAATCACAAGTTACACCTGCAGT
AGCAGCAGCAGCAGCAGCAGTAGCAGCAGTAGCAGCAGTAGCATATTTAC
TCAACAGCGGCAAGAGCAGCAGCTGCTTCAAGAAAAGGAACATCAAGCAT
ACCATTGGTCACACCACCGTCCTGTCCAGACCCCCACCGCTCGATCTGGC
TTCAAAAGCGGCACCAGCAAAAGCAGCAAAAGCAAGAATGCCAACAGCAG
TAGCGGTAGCTCCGGCAGCAGAAGCCTTCCCAGCTTACTTTCTTCTCCTC
ATCGATACATGCGGGAGCTGGAGGAGCAATGCTTACTGACATCACAAGAC
CACGGCGCCGGACTTTCATGGCCACTGAAGATTTTCCCGCTGGCATCATT
TACTCCTTTATCTTATAGCATCATTACCAACAGCAGTAGTAGTAGCAGCA
TCAGAAGTTGTAGCGATATTAACAGCCGCAGCATTTTCCGATTTGGACAA
AAGCTGAAGTGCAGTCCTTCTTCCTGCCCGGGGAGTGCGCAGCCTATCAT
CTTCGCCCTCTCTTCACAAACACCTTTCCAGCCGAAACCGTTTCTCGTCT
TTGCTTCACGGGATTCTGTGCACGTTTTTCTTCTCTTCCTCTTCCTTCTC
GCGTGGCGACGGTCTGTAGCAGCAGAAGTAAGGGTCGTTGCACCACTAGA
AGAGTGCTCGCACTTCCAGCAACAACAGCAGGAACAGCAGTTGGGGCAGC
ACCCTCGCCTTGAGGGGAGGGGCTCGTCAAGGTCCTTTTCTCTCTTCACC
CCGTCTCCCTCCTCATCTTCATTTTCAAACAGCACCATATCATCGCCCGC
AGCATCCTCCTCCTTCTCCTCTTCCTCCTCCTCCCCCTCAATCTTCTCTT
TCTCCCCCTTCTCTCCATCGTCGCCGCTATTAAAGCCTTATTGTATTTGC
CTTAGGACGGACACGACCACCAGCGTTTATCTTTGGTGA back to topCoding sequence (CDS) from alignment at chr12:279249..280737+ >NO12G00850.1 ID=NO12G00850.1|Name=NO12G00850.1|organism=Nannochloropsis oceanica|type=CDS|length=1260bp|location=Sequence derived from alignment at chr12:279249..280737+ (Nannochloropsis oceanica) ATGTCTCTCCTCCCGCTGAGGAGGTCCTGTGCTCAATCTGCATGCAGGTC CTCCATCGACCCCTCACCAGGCCCTGCAACCACATCTTCTGTCTCAACTG CATTCATAACTGGGCTACATGTTGCAAGAAACGAGGCAGTTGTTGAAGAG GCGCAGAAACAGCAGCCGCAGCCGCAGCAGCAGTCGCAGCAGCAGCAACA GCAGCAGGGTTTGAATGTCAGAGCGCCTACTGCCTCTCGTCAACGTAGGT GGCAGGTGCCGAGAGGGCAAGTGCAAAATGCGAGTCGTGTGAGAAAGAGA ATCACAAGTTACACCTGCAGTAGCAGCAGCAGCAGCAGCAGTAGCAGCAG TAGCAGCAGTAGCATATTTACTCAACAGCGGCAAGAGCAGCAGCTGCTTC AAGAAAAGGAACATCAAGCATACCATTGGTCACACCACCGTCCTGTCCAG ACCCCCACCGCTCGATCTGGCTTCAAAAGCGGCACCAGCAAAAGCAGCAA AAGCAAGAATGCCAACAGCAGTAGCGGTAGCTCCGGCAGCAGAAGCCTTC CCAGCTTACTTTCTTCTCCTCATCGATACATGCGGGAGCTGGAGGAGCAA TGCTTACTGACATCACAAGACCACGGCGCCGGACTTTCATGGCCACTGAA GATTTTCCCGCTGGCATCATTTACTCCTTTATCTTATAGCATCATTACCA ACAGCAGTAGTAGTAGCAGCATCAGAAGTTGTAGCGATATTAACAGCCGC AGCATTTTCCGATTTGGACAAAAGCTGAAGTGCAGTCCTTCTTCCTGCCC GGGGAGTGCGCAGCCTATCATCTTCGCCCTCTCTTCACAAACACCTTTCC AGCCGAAACCGTTTCTCGTCTTTGCTTCACGGGATTCTGTGCACGTTTTT CTTCTCTTCCTCTTCCTTCTCGCGTGGCGACGGTCTGTAGCAGCAGAAGT AAGGGTCGTTGCACCACTAGAAGAGTGCTCGCACTTCCAGCAACAACAGC AGGAACAGCAGTTGGGGCAGCACCCTCGCCTTGAGGGGAGGGGCTCGTCA AGGTCCTTTTCTCTCTTCACCCCGTCTCCCTCCTCATCTTCATTTTCAAA CAGCACCATATCATCGCCCGCAGCATCCTCCTCCTTCTCCTCTTCCTCCT CCTCCCCCTCAATCTTCTCTTTCTCCCCCTTCTCTCCATCGTCGCCGCTA TTAAAGCCTTATTGTATTTGCCTTAGGACGGACACGACCACCAGCGTTTA TCTTTGGTGA back to top
|