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Properties
| Property Name | Value |
|---|
| Product | wd repeat containing protein |
| Orig transcript id | gnl|cribi|Naga_100065g1.7398.mrna |
| Orig protein id | gnl|cribi|Naga_100065g1.7398 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:479227..483386 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8919 ID=rna8919|Name=rna8919|organism=Nannochloropsis gaditana|type=mRNA|length=972bp
ACGTTACCTATTATGCCCCTTGAGGCCCTACATCCAATTATCACACCGTG
CTTCTTCCAGGAAAAACTCATGATGCCTATGTATCCTCAGGTGGTACCAT
GCTCGCTCTTCGCACAGCATTTTTCATCCTTTTGCCCGCTCTGGCTGCCG
GGTTCCTCATGCCGACGCCCTCTTTGTCTAAGCCTTTCAGCATTATCACT
CGCTCCCGAGGTGTTCCGGCCCGTCTGCCCGTCACTGCGCTCAACAGTTG
GGGTGGGAAAAAACAAAAAACTACCCGTGTAGCAGTAGAACCAGAGGTTA
TTGCGCCTGATTATCGTGTGGCTGCCGGATTTTTCCTCGGTGGGGTTGGC
TTGGCGCTTCCCCCTCTGTCAAATCCCGGCGCGGGTTTGCCGTTGGCCTT
AATAGGCGCTTTCTTAGCAAGCCGCACCCAAAAAGTACGTTTTGTTTTCG
ATGAGGAAGCAATGGAAGTCATGACTGTTGGCGCTGACGGTCAGTCTCTG
TCGATGGAGCGGGAAAATTTTGCCGTGGGGGGGCGCAATCGCTGGACTTA
CACGAGTTTCACGAACTGGGAGTTCTACCCCTCCGAGCAAGTGCCTGTCC
TGGTCTATTTCAAAGAGACGCAGACCAAGCCAGAGGGACAAATCCACTTC
TTCCCCGTGATTGGAAACCCGGCCAGGCTCCTGGAAAATTTCAGGAAGTA
CGTGCCTTTGCCCGGGAAATGAGGGATCGGGAAGGGAGGACAGGGGCGGT
GGGGAGGCAGGGCGGATCATGACGTGTTGTGATTGCAGCGCCGCAGCGGT
TGAAAAATAGGAGTGGTAGTTGAAATACGATTGGGGCCTGTTCGGCAGTG
CTGAAAGGAAAGACAGGGGACTGAACACGCACGGCTTGTTATGGTGTGGC
TCACGGTGAAAGCTCCCAAGCAATCATGGCATTGCTCGCTCTCGTCTTTT
GTTTTGCTTTCGATGTCCGTAG back to topprotein sequence of rna8919 >rna8919-protein ID=rna8919-protein|Name=rna8919|organism=Nannochloropsis gaditana|type=polypeptide|length=1201bp
MAVAAAPSKNKKRATPTVSSASPPSTTSLVPAKDSSPSLIPRIVSADLHQ
VTPCFNHGGDVLACAMGSSILLLSTQTGEPVARFDDAHPSGVTCLSFGPD
QLLFSGGKDGCLKGWDYLKEEACLFVRTFPKAEILALCVAPTDPSNTLYM
ALGQRKPHHREPLPGDQTSLSRGDQSCAPTTPAAFMEKVSYKIIGYQVKE
KQRSKIQTLKAAPFFLRTTSTGNFLVTACSTSLNVWHVPSKEVYSQVLFD
DHSPREGSLQAVALHPSRPEIATGDVEGRVFLWHTLFNPLGTRLKQAKAR
ALQRGGPGLSHRRNALFRSEVKRWHAHGVRCLAYTPDGHYLLSGGEEAVL
VVCQVSKGGHPMTFLPRLGACLGGLTLSQDGSLCALTTLSNALRVLHPMD
LKTRWEWRGMAHLSATLGSTGGWGGRRKAKGNAYQNMSKAARLWAFGGRG
RLVSNCQPGKLQFFDVECGEVAGEVEVVSSNVVSRGSEAQEEGGKLVPPW
VTQAALSSDGGRMVTVEMRVGEMGIKRESLKFWERAGQGGRGSPYVLRAV
VDEPHGGGESGQVLSLAYHPRLDVAATCAASGDFALWARVLEAGEEGKEG
RGQVEAGSGARYRWICQAHVAFERGASRSLAFSSDGTLLAVACGAKVALW
DPEGLRLLGILTLDPALLPALPKGQEPSEIKALAFLPDAPRLVVATARSL
VVWDLLRLHIVQYYAAGRVLHLCAPGPETPRLLAGNGVGGKETLVHFAAV
LEGRDDPKFSTSPSVPPPPPSQSLVVFNAYEAAPVCTHPLPRYVGPVLAL
AFVDRQGEDTLGLCYMTRDGVTLLSPSLPRSFASPHYHPARPARGLAPAA
AAVAPEAGAEDRLGKRQRLEKEARRPAPTVPLGDPAAKNHNPPSISDLLG
DIPTGQLPKPSAIFGAFMSGLLPPSSSSFPPPSSFPTLVLPENPVEPMPA
TDVSAESRGDERIWEPHQQLQHRPQHAPRVPGLALPTPGLKKDLIALLRQ
SFRSYPLESSGRERVQVGDGRTPPSEAAKLTSTIPEGSALQEGREEGVPL
AEAPSLEKVEPEEKKQRAGVGGRLGRGSAVASPSPGRRGAGKASAALKGG
GDGVGGSGNEAMNGHAKHANPAGKSNARKAPDISAKRSKEKASNSIAASS
QRRKSTGSVKGGKDKSTPRSSRRASGSSVTDAANTSRTPREKGRRSTPAS
C back to topmRNA from alignment at KK037250.1:479227..483386- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna8919 ID=rna8919|Name=rna8919|organism=Nannochloropsis gaditana|type=mRNA|length=4160bp|location=Sequence derived from alignment at KK037250.1:479227..483386- (Nannochloropsis gaditana)
TAGCCCCTTTTTCTCGCAGTTTTGAAACCCACAGACGCTTTATAACATCC
ACAGGACTACTGGATCGAGTCAAACATTTTTTTTCGTGGCTGGGTTGGTA
GGATGGCTGTGGCTGCCGCGCCAAGTAAGAACAAAAAGCGGGCGACGCCT
ACAGTGAGTTCAGCCTCCCCTCCCTCGACCACCAGCCTAGTTCCTGCCAA
GGACTCCAGCCCCTCCTTGATCCCTCGAATCGTCTCCGCCGATCTTCACC
AAGTCACACCTTGCTTCAATCATGGCGGGGACGTGCTGGCTTGCGCAATG
GGCTCGTCCATTCTGCTGCTTTCAACCCAGACGGGTGAACCTGTAGCCCG
CTTTGACGATGCCCATCCCAGCGGGGTCACATGCCTTTCTTTTGGCCCTG
ATCAGCTATTGTTTAGCGGAGGAAAGGACGGTTGTCTAAAAGGGTGGGAT
TATTTGAAAGAAGAAGCTTGTTTGTTCGTCAGAACCTTCCCTAAGGCGGA
AATCCTGGCCTTGTGCGTCGCGCCCACAGACCCGTCCAACACCCTCTACA
TGGCTCTGGGGCAAAGGAAACCGCACCATCGTGAGCCACTACCCGGCGAT
CAGACATCATTGTCAAGAGGAGACCAATCCTGCGCACCAACCACTCCTGC
AGCCTTCATGGAAAAGGTCTCGTACAAAATCATAGGGTATCAGGTAAAGG
AGAAGCAGCGCAGCAAAATTCAGACCCTTAAAGCCGCCCCTTTCTTCCTA
CGAACGACAAGCACGGGTAACTTCCTCGTCACGGCCTGTTCGACGAGTCT
GAACGTCTGGCACGTGCCCTCCAAAGAAGTCTATTCTCAAGTGCTCTTCG
ACGACCACTCTCCCCGGGAAGGTTCCCTCCAGGCTGTCGCACTGCACCCC
TCGCGCCCCGAGATCGCCACCGGAGACGTGGAGGGGCGTGTCTTTCTCTG
GCACACCCTTTTCAATCCCCTGGGCACCCGGCTTAAGCAGGCCAAGGCCC
GTGCCTTGCAACGGGGTGGCCCGGGACTCTCGCACCGGAGAAATGCCTTG
TTTCGGAGCGAGGTGAAACGCTGGCACGCCCACGGTGTCCGTTGCCTCGC
CTACACGCCGGACGGGCACTACCTCCTCTCGGGAGGGGAGGAGGCCGTCC
TCGTCGTCTGCCAAGTCTCCAAGGGCGGACACCCCATGACCTTCCTCCCG
CGTTTGGGTGCCTGCCTGGGCGGGTTGACTCTCAGTCAAGACGGGTCCCT
GTGCGCCCTCACCACACTCAGCAACGCCCTTCGAGTGCTGCACCCCATGG
ACCTGAAAACCCGGTGGGAATGGCGCGGGATGGCGCACCTCTCGGCGACC
CTGGGAAGCACCGGAGGGTGGGGGGGAAGAAGAAAAGCGAAGGGGAATGC
TTACCAAAACATGTCCAAAGCCGCGCGTTTGTGGGCTTTTGGAGGAAGGG
GTAGACTCGTTAGCAATTGTCAGCCTGGAAAACTGCAATTTTTCGACGTG
GAGTGCGGGGAGGTGGCGGGAGAGGTTGAGGTGGTTTCCAGCAACGTCGT
GTCGAGAGGGAGCGAGGCGCAAGAGGAGGGAGGAAAGCTGGTTCCCCCGT
GGGTGACCCAGGCTGCTCTCTCAAGCGACGGAGGGCGAATGGTGACGGTG
GAAATGCGGGTGGGGGAGATGGGCATCAAACGAGAGAGCCTCAAATTCTG
GGAGCGGGCGGGGCAAGGAGGGAGGGGCTCTCCCTACGTCCTGCGAGCGG
TCGTGGACGAGCCGCACGGTGGTGGGGAATCGGGGCAGGTGCTATCCCTG
GCCTACCACCCTCGTTTGGATGTGGCGGCCACCTGCGCGGCCTCGGGAGA
CTTCGCGCTCTGGGCGCGGGTCTTAGAAGCCGGGGAGGAAGGGAAGGAGG
GACGGGGGCAAGTAGAGGCCGGGTCTGGGGCTCGTTACCGATGGATTTGT
CAGGCGCACGTGGCGTTCGAGCGCGGAGCTTCCCGAAGCCTGGCTTTTTC
CTCGGATGGAACGCTCCTGGCGGTGGCCTGCGGGGCCAAGGTGGCCTTGT
GGGACCCCGAGGGGCTCCGGCTTCTGGGCATCCTCACCCTGGACCCCGCC
CTCCTTCCCGCCCTGCCCAAGGGCCAGGAGCCGTCAGAGATCAAGGCCCT
GGCGTTCCTCCCAGACGCTCCCCGCCTCGTCGTCGCCACAGCCAGAAGTC
TGGTCGTCTGGGACCTGCTTCGTCTCCACATTGTCCAGTATTACGCGGCG
GGGAGGGTCTTGCACCTGTGTGCCCCAGGCCCTGAGACGCCGAGGCTGCT
GGCGGGGAACGGGGTCGGGGGGAAAGAGACTCTGGTTCATTTTGCGGCCG
TGCTGGAAGGGAGGGACGACCCCAAATTCTCCACCTCTCCTTCCGTCCCG
CCACCCCCACCGTCCCAGTCCCTTGTCGTGTTCAATGCTTACGAAGCCGC
CCCCGTCTGCACCCATCCCCTTCCCCGGTACGTCGGCCCCGTGCTGGCCC
TGGCATTTGTGGACCGGCAAGGCGAGGACACCCTAGGGCTCTGCTACATG
ACCCGGGATGGGGTCACCCTCCTCAGCCCCTCCCTCCCTCGATCCTTCGC
TTCCCCCCACTACCATCCCGCACGGCCCGCCCGGGGTCTGGCCCCCGCCG
CCGCGGCCGTGGCCCCTGAGGCCGGGGCGGAGGACAGGTTAGGGAAGCGG
CAGCGGCTCGAAAAGGAGGCACGAAGACCAGCGCCAACGGTGCCTTTGGG
GGATCCTGCGGCAAAAAATCACAACCCTCCCTCAATCTCGGACTTGCTCG
GTGACATCCCCACAGGGCAATTGCCGAAGCCCTCGGCCATTTTCGGGGCG
TTTATGAGCGGCCTCCTTCCCCCGTCCTCCTCGTCCTTTCCTCCGCCTTC
TTCCTTTCCCACCTTGGTCCTTCCTGAAAATCCCGTCGAGCCCATGCCAG
CGACGGACGTCTCTGCCGAGTCAAGGGGGGACGAGCGCATCTGGGAGCCC
CACCAGCAGCTGCAGCACAGACCACAGCATGCCCCTCGAGTACCCGGGTT
GGCTTTGCCCACGCCGGGGCTGAAGAAAGATTTGATCGCCTTGCTGCGAC
AGAGCTTTCGGTCCTATCCTCTGGAAAGCAGCGGGAGGGAAAGGGTGCAA
GTCGGCGATGGCCGGACCCCCCCCTCGGAGGCTGCCAAGCTGACCTCCAC
CATTCCCGAAGGTTCCGCCTTACAGGAGGGCCGGGAAGAAGGAGTGCCCC
TGGCAGAAGCTCCTAGCCTGGAAAAGGTGGAGCCGGAGGAAAAGAAGCAG
AGGGCAGGCGTAGGAGGGAGACTAGGCAGGGGCTCGGCGGTCGCCTCCCC
GTCACCAGGAAGGCGAGGGGCAGGGAAGGCTTCGGCCGCACTCAAAGGGG
GGGGTGACGGGGTAGGTGGATCAGGGAACGAGGCAATGAATGGGCACGCC
AAGCACGCCAATCCTGCGGGCAAAAGCAACGCTAGGAAGGCTCCCGATAT
CTCCGCGAAGCGATCGAAGGAGAAGGCGAGCAACAGCATCGCAGCCAGCA
GCCAGCGGCGGAAGAGCACCGGCAGCGTCAAGGGCGGTAAGGACAAGAGC
ACGCCCCGGTCATCGAGGCGTGCGAGTGGCAGCAGCGTGACGGACGCGGC
GAACACCAGCCGCACGCCTCGAGAGAAAGGGCGGAGGTCGACTCCGGCCT
CCTGTTGAGTTGAGCTCCATCCGAAGCTCTTAGGTACCCCAAGTCTTGAA
GGGCGACCGGTTGTCTTGCAGCAGGCGAAGGACAGTATACCGGTGATCGC
ACACGAAAAATTACGGGAGCAGTGAATCCGAGGCGGGAAGGGGCAGGGGG
GCGGTTGTGGGCACACGAGGAGCAAGGTCTGCCCTTGATGAGGCCTCGGA
CCGCCTCCGTCGGGGATTAATCGTGCGTCTCGGTGTGAAACTGAGTCGCA
GGGCAAAAGCACCACTTTTGGTTCTGTTCAGAACGTGTCAAAAGAGGACC
TACGGACATCGAAAGCAAAACAAAAGACGAGAGCGAGCAATGCCATGATT
GCTTGGGAGCTTTCACCGTGAGCCACACCATAACAAGCCGTGCGTGTTCA
GTCCCCTGTCTTTCCTTTCAGCACTGCCGAACAGGCCCCAATCGTATTTC
AACTACCACT back to topCoding sequence (CDS) from alignment at KK037250.1:479227..483386- >rna8919 ID=rna8919|Name=rna8919|organism=Nannochloropsis gaditana|type=CDS|length=3606bp|location=Sequence derived from alignment at KK037250.1:479227..483386- (Nannochloropsis gaditana)
ATGGCTGTGGCTGCCGCGCCAAGTAAGAACAAAAAGCGGGCGACGCCTAC
AGTGAGTTCAGCCTCCCCTCCCTCGACCACCAGCCTAGTTCCTGCCAAGG
ACTCCAGCCCCTCCTTGATCCCTCGAATCGTCTCCGCCGATCTTCACCAA
GTCACACCTTGCTTCAATCATGGCGGGGACGTGCTGGCTTGCGCAATGGG
CTCGTCCATTCTGCTGCTTTCAACCCAGACGGGTGAACCTGTAGCCCGCT
TTGACGATGCCCATCCCAGCGGGGTCACATGCCTTTCTTTTGGCCCTGAT
CAGCTATTGTTTAGCGGAGGAAAGGACGGTTGTCTAAAAGGGTGGGATTA
TTTGAAAGAAGAAGCTTGTTTGTTCGTCAGAACCTTCCCTAAGGCGGAAA
TCCTGGCCTTGTGCGTCGCGCCCACAGACCCGTCCAACACCCTCTACATG
GCTCTGGGGCAAAGGAAACCGCACCATCGTGAGCCACTACCCGGCGATCA
GACATCATTGTCAAGAGGAGACCAATCCTGCGCACCAACCACTCCTGCAG
CCTTCATGGAAAAGGTCTCGTACAAAATCATAGGGTATCAGGTAAAGGAG
AAGCAGCGCAGCAAAATTCAGACCCTTAAAGCCGCCCCTTTCTTCCTACG
AACGACAAGCACGGGTAACTTCCTCGTCACGGCCTGTTCGACGAGTCTGA
ACGTCTGGCACGTGCCCTCCAAAGAAGTCTATTCTCAAGTGCTCTTCGAC
GACCACTCTCCCCGGGAAGGTTCCCTCCAGGCTGTCGCACTGCACCCCTC
GCGCCCCGAGATCGCCACCGGAGACGTGGAGGGGCGTGTCTTTCTCTGGC
ACACCCTTTTCAATCCCCTGGGCACCCGGCTTAAGCAGGCCAAGGCCCGT
GCCTTGCAACGGGGTGGCCCGGGACTCTCGCACCGGAGAAATGCCTTGTT
TCGGAGCGAGGTGAAACGCTGGCACGCCCACGGTGTCCGTTGCCTCGCCT
ACACGCCGGACGGGCACTACCTCCTCTCGGGAGGGGAGGAGGCCGTCCTC
GTCGTCTGCCAAGTCTCCAAGGGCGGACACCCCATGACCTTCCTCCCGCG
TTTGGGTGCCTGCCTGGGCGGGTTGACTCTCAGTCAAGACGGGTCCCTGT
GCGCCCTCACCACACTCAGCAACGCCCTTCGAGTGCTGCACCCCATGGAC
CTGAAAACCCGGTGGGAATGGCGCGGGATGGCGCACCTCTCGGCGACCCT
GGGAAGCACCGGAGGGTGGGGGGGAAGAAGAAAAGCGAAGGGGAATGCTT
ACCAAAACATGTCCAAAGCCGCGCGTTTGTGGGCTTTTGGAGGAAGGGGT
AGACTCGTTAGCAATTGTCAGCCTGGAAAACTGCAATTTTTCGACGTGGA
GTGCGGGGAGGTGGCGGGAGAGGTTGAGGTGGTTTCCAGCAACGTCGTGT
CGAGAGGGAGCGAGGCGCAAGAGGAGGGAGGAAAGCTGGTTCCCCCGTGG
GTGACCCAGGCTGCTCTCTCAAGCGACGGAGGGCGAATGGTGACGGTGGA
AATGCGGGTGGGGGAGATGGGCATCAAACGAGAGAGCCTCAAATTCTGGG
AGCGGGCGGGGCAAGGAGGGAGGGGCTCTCCCTACGTCCTGCGAGCGGTC
GTGGACGAGCCGCACGGTGGTGGGGAATCGGGGCAGGTGCTATCCCTGGC
CTACCACCCTCGTTTGGATGTGGCGGCCACCTGCGCGGCCTCGGGAGACT
TCGCGCTCTGGGCGCGGGTCTTAGAAGCCGGGGAGGAAGGGAAGGAGGGA
CGGGGGCAAGTAGAGGCCGGGTCTGGGGCTCGTTACCGATGGATTTGTCA
GGCGCACGTGGCGTTCGAGCGCGGAGCTTCCCGAAGCCTGGCTTTTTCCT
CGGATGGAACGCTCCTGGCGGTGGCCTGCGGGGCCAAGGTGGCCTTGTGG
GACCCCGAGGGGCTCCGGCTTCTGGGCATCCTCACCCTGGACCCCGCCCT
CCTTCCCGCCCTGCCCAAGGGCCAGGAGCCGTCAGAGATCAAGGCCCTGG
CGTTCCTCCCAGACGCTCCCCGCCTCGTCGTCGCCACAGCCAGAAGTCTG
GTCGTCTGGGACCTGCTTCGTCTCCACATTGTCCAGTATTACGCGGCGGG
GAGGGTCTTGCACCTGTGTGCCCCAGGCCCTGAGACGCCGAGGCTGCTGG
CGGGGAACGGGGTCGGGGGGAAAGAGACTCTGGTTCATTTTGCGGCCGTG
CTGGAAGGGAGGGACGACCCCAAATTCTCCACCTCTCCTTCCGTCCCGCC
ACCCCCACCGTCCCAGTCCCTTGTCGTGTTCAATGCTTACGAAGCCGCCC
CCGTCTGCACCCATCCCCTTCCCCGGTACGTCGGCCCCGTGCTGGCCCTG
GCATTTGTGGACCGGCAAGGCGAGGACACCCTAGGGCTCTGCTACATGAC
CCGGGATGGGGTCACCCTCCTCAGCCCCTCCCTCCCTCGATCCTTCGCTT
CCCCCCACTACCATCCCGCACGGCCCGCCCGGGGTCTGGCCCCCGCCGCC
GCGGCCGTGGCCCCTGAGGCCGGGGCGGAGGACAGGTTAGGGAAGCGGCA
GCGGCTCGAAAAGGAGGCACGAAGACCAGCGCCAACGGTGCCTTTGGGGG
ATCCTGCGGCAAAAAATCACAACCCTCCCTCAATCTCGGACTTGCTCGGT
GACATCCCCACAGGGCAATTGCCGAAGCCCTCGGCCATTTTCGGGGCGTT
TATGAGCGGCCTCCTTCCCCCGTCCTCCTCGTCCTTTCCTCCGCCTTCTT
CCTTTCCCACCTTGGTCCTTCCTGAAAATCCCGTCGAGCCCATGCCAGCG
ACGGACGTCTCTGCCGAGTCAAGGGGGGACGAGCGCATCTGGGAGCCCCA
CCAGCAGCTGCAGCACAGACCACAGCATGCCCCTCGAGTACCCGGGTTGG
CTTTGCCCACGCCGGGGCTGAAGAAAGATTTGATCGCCTTGCTGCGACAG
AGCTTTCGGTCCTATCCTCTGGAAAGCAGCGGGAGGGAAAGGGTGCAAGT
CGGCGATGGCCGGACCCCCCCCTCGGAGGCTGCCAAGCTGACCTCCACCA
TTCCCGAAGGTTCCGCCTTACAGGAGGGCCGGGAAGAAGGAGTGCCCCTG
GCAGAAGCTCCTAGCCTGGAAAAGGTGGAGCCGGAGGAAAAGAAGCAGAG
GGCAGGCGTAGGAGGGAGACTAGGCAGGGGCTCGGCGGTCGCCTCCCCGT
CACCAGGAAGGCGAGGGGCAGGGAAGGCTTCGGCCGCACTCAAAGGGGGG
GGTGACGGGGTAGGTGGATCAGGGAACGAGGCAATGAATGGGCACGCCAA
GCACGCCAATCCTGCGGGCAAAAGCAACGCTAGGAAGGCTCCCGATATCT
CCGCGAAGCGATCGAAGGAGAAGGCGAGCAACAGCATCGCAGCCAGCAGC
CAGCGGCGGAAGAGCACCGGCAGCGTCAAGGGCGGTAAGGACAAGAGCAC
GCCCCGGTCATCGAGGCGTGCGAGTGGCAGCAGCGTGACGGACGCGGCGA
ACACCAGCCGCACGCCTCGAGAGAAAGGGCGGAGGTCGACTCCGGCCTCC
TGTTGA back to top
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