Naga_100065g1, gene8648 (gene) Nannochloropsis gaditana

Overview
NameNaga_100065g1
Unique Namegene8648
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:479227..483386 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100065g1
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:479227..483386 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL070ngnoL070Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G01150NO13G01150Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna8919rna8919-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna8919rna8919Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna8919

>rna8919-protein ID=rna8919-protein|Name=rna8919|organism=Nannochloropsis gaditana|type=polypeptide|length=1201bp
MAVAAAPSKNKKRATPTVSSASPPSTTSLVPAKDSSPSLIPRIVSADLHQ
VTPCFNHGGDVLACAMGSSILLLSTQTGEPVARFDDAHPSGVTCLSFGPD
QLLFSGGKDGCLKGWDYLKEEACLFVRTFPKAEILALCVAPTDPSNTLYM
ALGQRKPHHREPLPGDQTSLSRGDQSCAPTTPAAFMEKVSYKIIGYQVKE
KQRSKIQTLKAAPFFLRTTSTGNFLVTACSTSLNVWHVPSKEVYSQVLFD
DHSPREGSLQAVALHPSRPEIATGDVEGRVFLWHTLFNPLGTRLKQAKAR
ALQRGGPGLSHRRNALFRSEVKRWHAHGVRCLAYTPDGHYLLSGGEEAVL
VVCQVSKGGHPMTFLPRLGACLGGLTLSQDGSLCALTTLSNALRVLHPMD
LKTRWEWRGMAHLSATLGSTGGWGGRRKAKGNAYQNMSKAARLWAFGGRG
RLVSNCQPGKLQFFDVECGEVAGEVEVVSSNVVSRGSEAQEEGGKLVPPW
VTQAALSSDGGRMVTVEMRVGEMGIKRESLKFWERAGQGGRGSPYVLRAV
VDEPHGGGESGQVLSLAYHPRLDVAATCAASGDFALWARVLEAGEEGKEG
RGQVEAGSGARYRWICQAHVAFERGASRSLAFSSDGTLLAVACGAKVALW
DPEGLRLLGILTLDPALLPALPKGQEPSEIKALAFLPDAPRLVVATARSL
VVWDLLRLHIVQYYAAGRVLHLCAPGPETPRLLAGNGVGGKETLVHFAAV
LEGRDDPKFSTSPSVPPPPPSQSLVVFNAYEAAPVCTHPLPRYVGPVLAL
AFVDRQGEDTLGLCYMTRDGVTLLSPSLPRSFASPHYHPARPARGLAPAA
AAVAPEAGAEDRLGKRQRLEKEARRPAPTVPLGDPAAKNHNPPSISDLLG
DIPTGQLPKPSAIFGAFMSGLLPPSSSSFPPPSSFPTLVLPENPVEPMPA
TDVSAESRGDERIWEPHQQLQHRPQHAPRVPGLALPTPGLKKDLIALLRQ
SFRSYPLESSGRERVQVGDGRTPPSEAAKLTSTIPEGSALQEGREEGVPL
AEAPSLEKVEPEEKKQRAGVGGRLGRGSAVASPSPGRRGAGKASAALKGG
GDGVGGSGNEAMNGHAKHANPAGKSNARKAPDISAKRSKEKASNSIAASS
QRRKSTGSVKGGKDKSTPRSSRRASGSSVTDAANTSRTPREKGRRSTPAS
C
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Synonyms
Publications