NO27G01420.1, NO27G01420.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO27G01420.1
Unique Name	NO27G01420.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3013
Alignment location	chr27:461649..466999 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr27	genome	chr27:461649..466999 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO27G01420.1 vs.
Match: AFE02918.1 (Omp85 [Bigelowiella natans])

HSP 1 Score: 76.6 bits (187), Expect = 3.900e-10
Identity = 77/299 (25.75%), Postives = 128/299 (42.81%), Query Frame = 0

Query:  200 STVLDQEALDHVIQALGIWGVRLDKGKLRNVIQAIDQYYAQRGFIGSRVRTAYAHDNGSVILDVIERRVSATPVVLTFV--KPWEKDSSSSSSSSSSSSNNNGLSARIENGRAKATLPPSLPPSSPTKGEGAGGKGGGMPGILAPTASTPTSSTSLSPAAAAWAAGRAKPE----GALLRLPAMQKGEPPLVVCKGRTQAKVIAQALGLKRGAVFRLDRDKYRRLERLGPFDRAWLSLVNADRGEEELGVELIVHERPSRSFEPGLSKSLHTRGWTGDIYLEDKNLLGMNQAMVVKLCK 493
            S V++ EA+ ++    G  G +     L+ ++  I  YYA++GF+  +V +     NGSV     E R +   VV+ F+  K W+                   + R EN   K  +          K +   GK GG   I A  AS        S ++      + K E    G ++  P+         V +GRT+ +V+  ALGLK+G V + D +K+  L   G F+ A   +  +  G+  + + +   ER      PG +  L +R   GDI  +D+N LG+NQ +  ++ +
Sbjct:  208 SDVVEPEAVMNIAVFTGFLGTKPTGESLQRLVAGIHGYYAKKGFLFCQVSSRSIIQNGSVTFKATEPRTNDPEVVIKFLNHKSWD-------------------TIRRENEEKKQRV---------NKQKEKEGKEGG-DNIAASAASMKNDDKGASSSSLDEKGVKEKKEEEEDGGVIEKPS-----DLFEVTEGRTKPRVVRDALGLKKGTVTKWDPEKWADLINSGLFEEAVPQITCSSEGKIMVMLLVREPERNGTGLAPGCTIDLGSRKIMGDIKFKDQNFLGLNQHLKARISR 472

The following BLAST results are available for this feature:

BLAST of NO27G01420.1 vs.

BLAST of NO27G01420.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
AFE02918.1	3.900e-10	25.75	Omp85 [Bigelowiella natans]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO27G01420	NO27G01420	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO27G01420.1	NO27G01420.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO27G01420.1.cds1	NO27G01420.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01420.1.cds2	NO27G01420.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01420.1.cds3	NO27G01420.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01420.1.cds4	NO27G01420.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01420.1.cds5	NO27G01420.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01420.1.cds6	NO27G01420.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01420.1.cds7	NO27G01420.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01420.1.cds8	NO27G01420.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01420.1.cds9	NO27G01420.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01420.1.cds10	NO27G01420.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01420.1.cds11	NO27G01420.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01420.1.cds12	NO27G01420.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01420.1.cds13	NO27G01420.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01420.1.cds14	NO27G01420.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01420.1.cds15	NO27G01420.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr27:461649..466999+
coding sequence from alignment at chr27:461649..466999+

mRNA sequence

>NO27G01420.1 ID=NO27G01420.1|Name=NO27G01420.1|organism=Nannochloropsis oceanica|type=mRNA|length=3013bp
ATGCCAGCGCATCAGACGACTATCTGTGGTAGTGCGCTTGCTTGGGATGG
CATGGTCAGTCAATTCATTCTCCTCGCTCAAGCTGCCGTCATCACCCTTA
TCCTCTGCTCCAACGGCAACAGCTGCTGCTTCTGCTGCACGCCCCACCAT
TTCCTCCCCCTCTCCCACCTCCTCGTCCACCTGCTATTCCTCCTGTTCAT
CATCATCACTATCATCCACCACCCTTCTCGGCACAAGCCACGGCAGCGGC
TTCGGCAACAATGGTGGATTCACTCCCCCCCCTCCTCCTCCTCCTCCCCC
TCCAACTCCTGGTCCTCCTGGTGGTGGGGTGACGGAGACGAGGGCAACAA
CAACGGAGAAAATAAAGAGGGGGGAACCTGGGATCAAGTTGCTATGGTGG
CTCTTGGTGCTGCCGCTGTTGCTGCTCCTGCAGGAGCGGGAGGAGTCGCT
CTTTCCACCTCTCTCAGTCACCCTGTCCACGCCCTGATGAAACCGGCCGG
AGGAGTGGGAGGGAGGGAGGGAGGGAGGGAGGGCGGGCGGGCGGCGTTCA
TGACGAGAAACTGGCCGCCGCGATGCCTGGAGATATTGGCGCCGAATTCG
ACGGTTTTGGATCAGGAGGCGCTTGATCATGTCATCCAGGCCCTAGGCAT
CTGGGGCGTGCGGCTGGACAAAGGCAAGCTCCGCAACGTCATCCAGGCCA
TCGACCAATACTACGCCCAACGGGGATTCATTGGCTCGCGCGTGAGGACT
GCCTACGCCCACGACAATGGAAGCGTCATTCTGGACGTGATTGAACGCCG
GGTGAGCGCCACGCCCGTCGTCCTCACTTTCGTCAAGCCCTGGGAGAAGG
ACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAATAACGGT
CTGTCTGCACGGATCGAAAACGGACGTGCGAAGGCCACCCTCCCTCCCTC
CCTCCCTCCCTCCTCGCCTACTAAGGGAGAAGGAGCAGGAGGGAAAGGAG
GAGGGATGCCAGGTATCCTAGCACCGACGGCATCCACCCCGACCTCCTCC
ACCTCCTTGTCCCCAGCAGCGGCCGCATGGGCCGCCGGTCGCGCTAAGCC
CGAGGGGGCCTTGCTCCGACTGCCGGCGATGCAGAAGGGTGAGCCCCCTC
TGGTGGTGTGCAAGGGACGCACGCAAGCCAAGGTCATCGCCCAAGCCCTC
GGACTCAAGAGAGGGGCTGTCTTCCGCCTGGATCGGGACAAGTACCGCCG
CCTCGAGCGCTTGGGGCCCTTCGACCGCGCCTGGCTCTCCCTCGTGAACG
CCGACAGGGGCGAGGAGGAGCTGGGTGTGGAGCTGATCGTGCACGAGCGG
CCATCCCGCTCCTTCGAGCCCGGCCTGAGCAAGAGCCTGCACACGCGCGG
GTGGACGGGCGATATCTACCTGGAGGACAAGAATCTCCTGGGGATGAACC
AGGCCATGGTCGTGAAGCTCTGCAAGGGACTCGTCCAGCACCGTCGGGAG
CCCTGTATCACTATGTCAGCCGAATTCCGCGACAACGCCCTCAAGTCCGG
CGTCCATCGGTCCTTCTCCCTCTATCGCGACCCTGTGGGAGAAGCCATTA
TCCGGGAGGGCGGCTCGGCTCGCTTTCACCTCCCTTGGCTGGGCCCTATC
CGCAGCGGGTTGGAGTTCACTGCTGACCGTCTCCTGCGAGCCTCCTCGTC
CATCTCGGACAAGGACCGCCTGGGAAAAGGGCAGGACAGCAGCAGCAGCA
GCAGCGGTTCAGTATTTGCCATGGGCGGAGGTGGGGCCACTGCCACGGTC
ACGGCCTTGTCGACGGACGTGGGCCTCGGCCTCGGCCTTTGGGGGGGACG
GCAGGACGCTGAGCTCTCCTTTTCCTCGGGCCTGGCATTCGTCCACGATC
CCCGCCTCCCCTCCCCTCCCTCCCTCCACCTCGACCACGGTCAGGCCTTC
CAAAGGATGCAGGCAGTCACCACCTGGCAGCATCCGCTCCCCCTCGGCCT
CATCCTCGGCTCCCGCAGCCTCGCCTACTGGGCCTCCCGGGCCATACCCC
CCTACCTGGCCTACCGCATGGGGGGGCACCGCTTCTACGTCCGCGGCTAC
GACGACAATGACTTCGCGCCATTTTCCTCACTGCAGGGAACCACCCTGGA
AGTGCGCTTGCCCCTAATGCTGACGGCTTCAGGCACGCGCATCGGCCTCT
CGGCCTCAGCATTCGTCGATTACGCGACCGGAGCCTCCCTCCCTGCCTCC
TCCTCGTCTTCCGCCCCTTCCTCCTCCTCCGCCGTGCCCTCTCTCTTGTC
TCAGTACATGGCCAAGGGGGAGGAGTTCGTCGCGGGAGGGCTGGGGTTGA
AGGCCGGACCCATCAAAATCGATTGGGCCGTGAACAAGAGGGGGGAGGGA
AAGGTACACGTCTCCCTCGCGGATCCCTCCTTTTAAAAAGTCTTGCGACT
CCCTCCCTTTTTTGGCCTCCTTCTTTCCCTCTCCCCCTCCCTCCCTCCCT
CGTGTGCGGGAAGGTGGAGGCGAAGGAGGAGTGGGAAGAGAATTTAGGGT
GGGATGGAGGGATGAAAAGAGGCAGGGATGGAAGGAGAGAAAGTCAGGTT
GTACATAGGGGGGGGAAAGAGCCCTGTATGGTGTTCCTTCCTCCTTCCCT
CCCTCCTATCTTTGTTGCTCGATGAGAAGAGGCAGGTCGGCAAGGGGGGG
GGAGGGAGGGAGGGGGCAAAGGAGCGGGACGGGACGGTGGATGTATGTAT
CTAATTTTTAAAAAAGGACGTCGTCAGTGTACACTCAGTGAAGGGTATTG
TAGAAAGTGAGGGAGGGACGGAGGGAGGGAGGGAGGGAGGGGTGGAAGGA
AGTAGACGAGGTGATCGAGTGAGCCTCCCTTTATTCGCGATCTAAGGCTC
TGGGGAGGAAATATATGACCAGAAGACAAAACGGGAGGGGTGACGACGGA
TAGGAAGGGAAGAGCACTCAGAATAACAGTAAGAGAATGAATCGATTCTA
CGCGTGTTTGGGA

protein sequence of NO27G01420.1

>NO27G01420.1-protein ID=NO27G01420.1-protein|Name=NO27G01420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=812bp
MPAHQTTICGSALAWDGMVSQFILLAQAAVITLILCSNGNSCCFCCTPHH
FLPLSHLLVHLLFLLFIIITIIHHPSRHKPRQRLRQQWWIHSPPSSSSSP
SNSWSSWWWGDGDEGNNNGENKEGGTWDQVAMVALGAAAVAAPAGAGGVA
LSTSLSHPVHALMKPAGGVGGREGGREGGRAAFMTRNWPPRCLEILAPNS
TVLDQEALDHVIQALGIWGVRLDKGKLRNVIQAIDQYYAQRGFIGSRVRT
AYAHDNGSVILDVIERRVSATPVVLTFVKPWEKDSSSSSSSSSSSSNNNG
LSARIENGRAKATLPPSLPPSSPTKGEGAGGKGGGMPGILAPTASTPTSS
TSLSPAAAAWAAGRAKPEGALLRLPAMQKGEPPLVVCKGRTQAKVIAQAL
GLKRGAVFRLDRDKYRRLERLGPFDRAWLSLVNADRGEEELGVELIVHER
PSRSFEPGLSKSLHTRGWTGDIYLEDKNLLGMNQAMVVKLCKGLVQHRRE
PCITMSAEFRDNALKSGVHRSFSLYRDPVGEAIIREGGSARFHLPWLGPI
RSGLEFTADRLLRASSSISDKDRLGKGQDSSSSSSGSVFAMGGGGATATV
TALSTDVGLGLGLWGGRQDAELSFSSGLAFVHDPRLPSPPSLHLDHGQAF
QRMQAVTTWQHPLPLGLILGSRSLAYWASRAIPPYLAYRMGGHRFYVRGY
DDNDFAPFSSLQGTTLEVRLPLMLTASGTRIGLSASAFVDYATGASLPAS
SSSSAPSSSSAVPSLLSQYMAKGEEFVAGGLGLKAGPIKIDWAVNKRGEG
KVHVSLADPSF*

mRNA from alignment at chr27:461649..466999+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO27G01420.1 ID=NO27G01420.1|Name=NO27G01420.1|organism=Nannochloropsis oceanica|type=mRNA|length=5351bp|location=Sequence derived from alignment at chr27:461649..466999+ (Nannochloropsis oceanica)
ATGCCAGCGCATCAGACGACTATCTGTGGTAGTGCGCTTGCTTGGGATGG
CATGGTCAGGTCAGGGCCATCACTCAATTATTGTCGCATCCGTCTGTTGC
AAATGTTGGCGTTGCGGCGAAGACTCGACGGGCTCTTGCTTCTCTCTGCT
CCCCTTAAGAACGCCTCTGCTCCCGACGCCGGTAAAAAAGACTTGCACGT
TCATCTTATATTCCACCCCCACTGTCTCTCGCATCCCATACAGACCTTAC
AGCTGTTTTAGCGGCCGAGCCATCGTCCGCTCGAGCAAGAGGCAAGGCCG
TCCTATCAGCCCGCCCTCCCTCCCCCCCTCGACTCCTCGATGCCGCCTAC
TTCACGTTCCTCCTTCCTCGCCCTCCCCGTCCTCCTCGTCCTCCTTCTCT
CCATCTCCCTCCTTCCCCTAGTCAATTCATTCTCCTCGCTCAAGCTGCCG
TCATCACCCTTATCCTCTGCTCCAACGGCAACAGCTGCTGCTTCTGCTGC
ACGCCCCACCATTTCCTCCCCCTCTCCCACCTCCTCGTCCACCTGCTATT
CCTCCTGTTCATCATCATCACTATCATCCACCACCCTTCTCGGCACAAGC
CACGGCAGCGGCTTCGGCAACAATGGTGGATTCACTCCCCCCCCTCCTCC
TCCTCCTCCCCCTCCAACTCCTGGTCCTCCTGGTGGTGGGGTGACGGAGA
CGAGGGCAACAACAACGGAGAAAATAAAGAGGGGGGAACCTGGGATCAAG
TTGCTATGGTGGCTCTTGGTGCTGCCGCTGTTGCTGCTCCTGCAGGAGCG
GGAGGAGTCGCTCTTTCCACCTCTCTCAGTCACCCTGTCCACGCCCTGAT
GAAACCGGCCGGAGGAGTGGGAGGGAGGGAGGGAGGGAGGGAGGGCGGGC
GGGCGGCGTTCATGACGAGAAACTGGCCGCCGCGATGCCTGGAGATATTG
GCGCCGAATTCGACGGTTTTGGATCAGGAGGCGCTTGATCATGTCATCCA
GGTAGGGGAGGAGGGAGGGCGCGAAGAAGAGAGGGGAAGGGTGGCTTTGA
CGGTGCCTGAGTACAGATCGATTACGCCGATCAGGTACAGCGCCCCCTCC
CGCTGGAACTTCTTCTCATCTCTCTTTTCTTCTCTCCCTCCCTCTCTCCC
TCCCTCCCCCTCTCCTTCGAACCCGCAGGCCCTAGGCATCTGGGGCGTGC
GGCTGGACAAAGGCAAGCTCCGCAACGTCATCCAGGCCATCGACCAATAC
TACGCCGTCAGTCCTGCCCCCCCCCCCCCCCCCCCCTTCCCTCCTCCTCC
CTCTCCCTCTCAACGCTTTCGACTCACACCCTCTTATCCCCCCTCCCTCC
CTCCCTTTCAGCAACGGGGATTCATTGGCTCGCGCGTGAGGACTGCCTAC
GCCCACGACAATGGAAGGTACGCTCCCTCCCTCCCTCCCACCTGGTACTG
TACGTGCTCACCCTCCTTCCCTCCCTCCCTGCCTCCCCCCTCCCTCCCTC
ATTCTTGCAGCGTCATTCTGGACGTGATTGAACGCCGGGTGAGCGCCACG
CCCGTCGTCCTCACTTTCGTCAAGCCCTGGGAGAAGGACAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAACAATAACGGTCTGTCTGCACGGA
TCGAAAACGGACGTGCGAAGGCCACCCTCCCTCCCTCCCTCCCTCCCTCC
TCGCCTACTAAGGGAGAAGGAGCAGGAGGGAAAGGAGGAGGGATGCCAGG
TATCCTAGCACCGACGGCATCCACCCCGACCTCCTCCACCTCCTTGTCCC
CAGCAGCGGCCGCATGGGCCGCCGGTCGCGCTAAGCCCGAGGGGGCCTTG
CTCCGACTGCCGGCGATGCAGAAGGGTGAGGGAGGGAGGGAGGGAGGGAG
GAAGGAAGGGAGGGAGGGAGGGAGGGAACAAAAGATGTGTTCTTCATTCT
TTACGAGCTTCCTGCTCTCCTCTCTTCCTTCTGTCACTCCAATCAATCAA
CTCGCTCACTCAACTCGCCCATCCAATCGATTAAATGGCTCACTGTGCAT
CCAATAGATTAAATGGCTCACTGTGCACTCCTATTTACAGGTGAGCCCCC
TCTGGTGGTGTGCAAGGGACGCACGCAAGCCAAGGTCATCGCCCAAGCCC
TCGGACTCAAGTACGCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
TCCCTCTTCCTTCCCCCACCTCATTTACCCTTCCACCATCCCTCCCTCCC
TTCCTCCCTCCCTCCCCCTCCCTCCCTCCCCCTCCCTCCCCACCCTCTTC
CCGCCTTTCCCTAGGAGAGGGGCTGTCTTCCGCCTGGATCGGGACAAGTA
CCGCCGCCTCGAGCGCTTGGGGCCCTTCGACCGCGCCTGGCTCTCCCTCG
TGAACGCCGACAGGGGCGAGGAGGAGGTACAGCATCGCCCTCCTTCCCTC
CCCTCTTCTCTCCCCCCCTCCCTCCTTCCCTCCCTCCTTCCCTGCTTCCT
TTCCTCCTCCTTTCTAGCGTAGACTCACTTTCCTCCCTCCCTCCCTCCCT
CCTCCTTTTCCTTTTCCAGCTGGGTGTGGAGCTGATCGTGCACGAGCGGC
CATCCCGCTCCTTCGAGCCCGGCCTGAGCAAGAGCCTGCACACGCGCGGG
TGGACGGGCGATATCTACCTGGAGGACAAGAATCTCCTGGGGATGAACCA
GGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGATGGCTTGCTT
TGTCCAGAGACCTCCCTGCGTACTCTCGTCCTCTCGTGCTCTCTGCGTGC
TCTAACGACTCTCTTCCCTCCCCCTCCACCTGGCCAGGCCATGGTCGTGA
AGCTCTGCAAGGGACTCGTCCAGCACCGTCGGGAGCCCTGTATCACTATG
TCAGGTATCTGCCCTCCCTCCCTCCCTTCTTCCTTCCTCTCCTTCCTCCC
CGTCGTGTCCAACTCGTCAACTCCGTCCACATCCCCATGTCACTCCTGTT
CATGTCACTCAATCCGCCCTCCTGCCCTCCCCCCCTCCCTCCAGCCGAAT
TCCGCGACAACGCCCTCAAGTCCGGCGTCCATCGGTCCTTCTCCCTCTAT
CGCGACCCTGTGGGAGAAGCCATTATCCGGGAGGGCGGCTCGGCTCGCTT
TCACCTCCCTTGGCTGGGTGAGGGAAACACAGAAGGGGGAAGGGAGGGAG
GAAGGTTCGCAGGAGACGGTCGGCTGTGAACTCCGGCCCGATGCGGATAG
GACTAACGGAGGGAGGAAGGGAGGGAGGGAGGGAGGGCGATGCTCAGAGC
TTTGTGCTAATCAAATGGAGATCTTCCTACCTCCCGGCCTCCCTCCCTCC
CTCCCTAGGCCCTATCCGCAGCGGGTTGGAGTTCACTGCTGACCGTCTCC
TGCGAGCCTCCTCGTCCATCTCGGACAAGGACCGCCTGGGAAAAGGGCAG
GACAGCAGCAGCAGCAGCAGCGGTTCAGTATTTGCCATGGGCGGAGGTGC
GCTGTGTGCCCTCTCCCTCCCTCCCGCCCTCCCTTTCACCCTCCCTCCAT
CCCCTCCCTCCAACCCGCCCTCCATCCCGCCCTCTCTTTCCTCCTCCCTT
CCTTCTGGATCCAGTCCGCCCGAGGACTTGGAGTCATCTGTCTGTACATC
TTACCCTCCTATCCATTCCTCCCTCCCTCCCTCCTTCCAGGTGGGGCCAC
TGCCACGGTCACGGCCTTGTCGACGGACGTGGGCCTCGGCCTCGGCCTTT
GGGGGGGACGGCAGGTACGCCCTCCCTCCCTCCCTTTCTCCCTCCCTCCC
TCTCGCCGAGCATGTCTTGACCCATCACCTCCTCCTTCTCCCCCGCTAAC
TCCCCCCCTCCCTCCCAGGACGCTGAGCTCTCCTTTTCCTCGGGCCTGGC
ATTCGTCCACGATCCCCGCCTCCCCTCCCCTCCCTCCCTCCACCTCGACC
ACGGTCAGGCCTTCCAAAGGATGCAGGCAGTCACCACCTGGCAGCATCCG
CTCCCCCTCGGCCTCATCCTCGGCTCCCGCAGCCTCGCCTACTGGGTATG
TGCCCTCCCTCCCTCCCTCCCTCCCTTGCCTCGTCGCCGTGCGTGTCTGC
CTCGTCGAGCCCCTCGAGTCCGAATGACTCCCATCACCCAACAACCACCA
TCCTCCAAAATTCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCACCAGGCCTCCCGGGCCATACCCCCCTACC
TGGCCTACCGCATGGGGGGGCACCGCTTCTACGTCCGCGGCTACGACGAC
AATGACTTCGCGCCATTTTCCTCACTGCAGGGAACCACCCTGGAAGTGCG
CTTGCCCCTAATGCTGACGGCTTCAGGTACGTATCCTCGCCTCCCCTTCC
TTCCTTCCTTCCTTTCCCCCCACCTTCCTTCCTTCTTCCCGATGTCCCTT
CTGCTCACCTTTGCCTCCTTCCCTCCCTCCCTCCCTCACTCCTTTCTCCC
TTCCTTCCCTCCTTCTCCAGGCACGCGCATCGGCCTCTCGGCCTCAGCAT
TCGTCGATTACGCGACCGGAGCCTCCCTCCCTGCCTCCTCCTCGTCTTCC
GCCCCTTCCTCCTCCTCCGCCGTGCCCTCTCTCTTGTCTCAGTACATGGC
CAAGGGGGAGGAGTTCGTCGCGGGAGGGCTGGGGTTGAAGGCCGGACCCA
TCAAAATCGATTGGGCCGTGAACAAGAGGGGGGAGGGAAAGGTACACGTC
TCCCTCGCGGATCCCTCCTTTTAAAAAGTCTTGCGACTCCCTCCCTTTTT
TGGCCTCCTTCTTTCCCTCTCCCCCTCCCTCCCTCCCTCGTGTGCGGGAA
GGTGGAGGCGAAGGAGGAGTGGGAAGAGAATTTAGGGTGGGATGGAGGGA
TGAAAAGAGGCAGGGATGGAAGGAGAGAAAGTCAGGTTGTACATAGGGGG
GGGAAAGAGCCCTGTATGGTGTTCCTTCCTCCTTCCCTCCCTCCTATCTT
TGTTGCTCGATGAGAAGAGGCAGGTCGGCAAGGGGGGGGGAGGGAGGGAG
GGGGCAAAGGAGCGGGACGGGACGGTGGATGTATGTATCTAATTTTTAAA
AAAGGACGTCGTCAGTGTACACTCAGTGAAGGGTATTGTAGAAAGTGAGG
GAGGGACGGAGGGAGGGAGGGAGGGAGGGGTGGAAGGAAGTAGACGAGGT
GATCGAGTGAGCCTCCCTTTATTCGCGATCTAAGGCTCTGGGGAGGAAAT
ATATGACCAGAAGACAAAACGGGAGGGGTGACGACGGATAGGAAGGGAAG
AGCACTCAGAATAACAGTAAGAGAATGAATCGATTCTACGCGTGTTTGGG
A

Coding sequence (CDS) from alignment at chr27:461649..466999+

>NO27G01420.1 ID=NO27G01420.1|Name=NO27G01420.1|organism=Nannochloropsis oceanica|type=CDS|length=2436bp|location=Sequence derived from alignment at chr27:461649..466999+ (Nannochloropsis oceanica)
ATGCCAGCGCATCAGACGACTATCTGTGGTAGTGCGCTTGCTTGGGATGG
CATGGTCAGTCAATTCATTCTCCTCGCTCAAGCTGCCGTCATCACCCTTA
TCCTCTGCTCCAACGGCAACAGCTGCTGCTTCTGCTGCACGCCCCACCAT
TTCCTCCCCCTCTCCCACCTCCTCGTCCACCTGCTATTCCTCCTGTTCAT
CATCATCACTATCATCCACCACCCTTCTCGGCACAAGCCACGGCAGCGGC
TTCGGCAACAATGGTGGATTCACTCCCCCCCCTCCTCCTCCTCCTCCCCC
TCCAACTCCTGGTCCTCCTGGTGGTGGGGTGACGGAGACGAGGGCAACAA
CAACGGAGAAAATAAAGAGGGGGGAACCTGGGATCAAGTTGCTATGGTGG
CTCTTGGTGCTGCCGCTGTTGCTGCTCCTGCAGGAGCGGGAGGAGTCGCT
CTTTCCACCTCTCTCAGTCACCCTGTCCACGCCCTGATGAAACCGGCCGG
AGGAGTGGGAGGGAGGGAGGGAGGGAGGGAGGGCGGGCGGGCGGCGTTCA
TGACGAGAAACTGGCCGCCGCGATGCCTGGAGATATTGGCGCCGAATTCG
ACGGTTTTGGATCAGGAGGCGCTTGATCATGTCATCCAGGCCCTAGGCAT
CTGGGGCGTGCGGCTGGACAAAGGCAAGCTCCGCAACGTCATCCAGGCCA
TCGACCAATACTACGCCCAACGGGGATTCATTGGCTCGCGCGTGAGGACT
GCCTACGCCCACGACAATGGAAGCGTCATTCTGGACGTGATTGAACGCCG
GGTGAGCGCCACGCCCGTCGTCCTCACTTTCGTCAAGCCCTGGGAGAAGG
ACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAATAACGGT
CTGTCTGCACGGATCGAAAACGGACGTGCGAAGGCCACCCTCCCTCCCTC
CCTCCCTCCCTCCTCGCCTACTAAGGGAGAAGGAGCAGGAGGGAAAGGAG
GAGGGATGCCAGGTATCCTAGCACCGACGGCATCCACCCCGACCTCCTCC
ACCTCCTTGTCCCCAGCAGCGGCCGCATGGGCCGCCGGTCGCGCTAAGCC
CGAGGGGGCCTTGCTCCGACTGCCGGCGATGCAGAAGGGTGAGCCCCCTC
TGGTGGTGTGCAAGGGACGCACGCAAGCCAAGGTCATCGCCCAAGCCCTC
GGACTCAAGAGAGGGGCTGTCTTCCGCCTGGATCGGGACAAGTACCGCCG
CCTCGAGCGCTTGGGGCCCTTCGACCGCGCCTGGCTCTCCCTCGTGAACG
CCGACAGGGGCGAGGAGGAGCTGGGTGTGGAGCTGATCGTGCACGAGCGG
CCATCCCGCTCCTTCGAGCCCGGCCTGAGCAAGAGCCTGCACACGCGCGG
GTGGACGGGCGATATCTACCTGGAGGACAAGAATCTCCTGGGGATGAACC
AGGCCATGGTCGTGAAGCTCTGCAAGGGACTCGTCCAGCACCGTCGGGAG
CCCTGTATCACTATGTCAGCCGAATTCCGCGACAACGCCCTCAAGTCCGG
CGTCCATCGGTCCTTCTCCCTCTATCGCGACCCTGTGGGAGAAGCCATTA
TCCGGGAGGGCGGCTCGGCTCGCTTTCACCTCCCTTGGCTGGGCCCTATC
CGCAGCGGGTTGGAGTTCACTGCTGACCGTCTCCTGCGAGCCTCCTCGTC
CATCTCGGACAAGGACCGCCTGGGAAAAGGGCAGGACAGCAGCAGCAGCA
GCAGCGGTTCAGTATTTGCCATGGGCGGAGGTGGGGCCACTGCCACGGTC
ACGGCCTTGTCGACGGACGTGGGCCTCGGCCTCGGCCTTTGGGGGGGACG
GCAGGACGCTGAGCTCTCCTTTTCCTCGGGCCTGGCATTCGTCCACGATC
CCCGCCTCCCCTCCCCTCCCTCCCTCCACCTCGACCACGGTCAGGCCTTC
CAAAGGATGCAGGCAGTCACCACCTGGCAGCATCCGCTCCCCCTCGGCCT
CATCCTCGGCTCCCGCAGCCTCGCCTACTGGGCCTCCCGGGCCATACCCC
CCTACCTGGCCTACCGCATGGGGGGGCACCGCTTCTACGTCCGCGGCTAC
GACGACAATGACTTCGCGCCATTTTCCTCACTGCAGGGAACCACCCTGGA
AGTGCGCTTGCCCCTAATGCTGACGGCTTCAGGCACGCGCATCGGCCTCT
CGGCCTCAGCATTCGTCGATTACGCGACCGGAGCCTCCCTCCCTGCCTCC
TCCTCGTCTTCCGCCCCTTCCTCCTCCTCCGCCGTGCCCTCTCTCTTGTC
TCAGTACATGGCCAAGGGGGAGGAGTTCGTCGCGGGAGGGCTGGGGTTGA
AGGCCGGACCCATCAAAATCGATTGGGCCGTGAACAAGAGGGGGGAGGGA
AAGGTACACGTCTCCCTCGCGGATCCCTCCTTTTAA

Synonyms

Publications