NO13G03430.1, NO13G03430.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO13G03430.1
Unique NameNO13G03430.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1650
Alignment locationchr13:1025650..1027299 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:1025650..1027299 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO13G03430.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G03430NO13G03430Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO13G03430.1NO13G03430.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO13G03430.1.cds1NO13G03430.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO13G03430.1 ID=NO13G03430.1|Name=NO13G03430.1|organism=Nannochloropsis oceanica|type=mRNA|length=1650bp
ATGGAAGCGCCTAGCAGCCCCATAGACAAGGAGCCTGAGATGAAGAAAGA
TGCTGCCGCTGCAATTGCTCCTGTCCCTCCTTGTCCCCCTTCTTCTGCCG
TAAATTATTGGGAAGCTTCCCCTGAGAAAGAGAAAGAAATTAAGCCGGCT
GCGGCAGACGCCATAGAAGGGGAGAAGAAAGACACCAGTGCTGCCGCTAT
TTATTCTCCTGTCGCTCCTGCTGCTCCTGTTGCTCCCCGATGTTCTCCTT
CCCCTGCCAAGAAACAGCGGGAAGCTTACCCTGCGGAAAAGGCGGCAGCT
AACACCATAGACAAGAAGGAGGATGAGGCGAGGGAAGAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCCCCAAAGACCCACGCCCATGCCCACCACGGCCA
GCGCCACCCTCCCTCCCTCCCCCCCTGCCCCTGGGCACTACTGGTCCGTC
CCCTCCGCCGGCGCTAAGCGGGAACGGAAGGCAGTCGAAACCCTCATCGT
TCGTGATCCCCGTGACACGCAGCCTGTCACCATCAAGCAGGGGAAAGGTT
CGAAGAAGCTGGGGGAGATGGAGACCTTTAGTCGAGAGATAGGGAAGATC
AGAAACAAGGACCCGTTTCTGAAGGTGCTGCACGGGCTGTGCTTTGGCCG
AGGGCAGGCCAAGGCTACCGAGGTAAAGGGACGCCTGAGGGAGTTCTCGG
GTTTGGTCTACGAAGAGGGGGAGGAGGAAAGGAGGGAAGGAGACTTGGCC
CGGGAAAAGGTGGAGGAGAAGGCGAGGAGAATGACAGTCGCAGAGTTGAA
GAGGGCCTGGGGAGTGCTGGGGGTGAGGACGAGAGAGGGAGGGAGGGCGG
GGGGAAAAAAGGAGGAGCTTGTGGAGGAGCTGGTAAACTGGCTGGAGTTG
CCTAGGGAGGAGGACGGAAGAAGGGAGGGAGGGAAGAAGGGGAGGAAGGT
GGCGGTGACGAAGAGGAGAAAGAGAAAGAGCAGTGGGGCGAAAGGAGAAG
AGCATGTGGAGGAGGAGGAGGGAAAAGAGGAGGAGGAGCAGCAGATGCGG
CAGAAAAAGATGAAGACGCTTGCGGTGGCTTTGAAGACGAAGGGAAAGAA
GAAGGAGACGAAGAAGAGGAGGAATTGCAAGCTGTTCAGTGCGTCGGCCA
ATATGCTGAGGAGAAAGGGGAAGGGAGGGAAGGAGGGGGGAAGGAAGGGG
TGGGGGGAGAAAATAGAGAATAAGGAAGAGGAGAAAGAAGAGGAAAAGGA
GGAGGAAGAATGTGACGATGAGATGAATGGATCGAAGAGAAGGAAGAAAA
AGGTGGTGGGGGCATCGGAAAAGGAGAAGGAAAAAGAGGAGGGAGTGGAG
GAGGAGGAGGAGGAGGAGGAAGAGGAAGGAGGAATGAATATAAGGAAAGG
CGAGAAAGAAGTAGAGAAGGAAGTAGAGGAGGGGGAGGTGAGGGAAGGTG
AAAAGGATAAAGAAGAGGAGAATAGGGGCGTCCCTACTGCTGTGCTGGAG
GAAGGGGTGATGAATATCCTTGCCGCTGCTGACCCTGCCGTCGTGACGAT
CAAGATGGTGATGGCGCAGCTGCACGAGAATCTGGGATGGGACGTGAGTG
CTCACAAGCCGCTCATTACGGACATTGTCATGCGAAACCTCGAAAGCTGA
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protein sequence of NO13G03430.1

>NO13G03430.1-protein ID=NO13G03430.1-protein|Name=NO13G03430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=550bp
MEAPSSPIDKEPEMKKDAAAAIAPVPPCPPSSAVNYWEASPEKEKEIKPA
AADAIEGEKKDTSAAAIYSPVAPAAPVAPRCSPSPAKKQREAYPAEKAAA
NTIDKKEDEAREEQQQQQQQQQPQRPTPMPTTASATLPPSPPAPGHYWSV
PSAGAKRERKAVETLIVRDPRDTQPVTIKQGKGSKKLGEMETFSREIGKI
RNKDPFLKVLHGLCFGRGQAKATEVKGRLREFSGLVYEEGEEERREGDLA
REKVEEKARRMTVAELKRAWGVLGVRTREGGRAGGKKEELVEELVNWLEL
PREEDGRREGGKKGRKVAVTKRRKRKSSGAKGEEHVEEEEGKEEEEQQMR
QKKMKTLAVALKTKGKKKETKKRRNCKLFSASANMLRRKGKGGKEGGRKG
WGEKIENKEEEKEEEKEEEECDDEMNGSKRRKKKVVGASEKEKEKEEGVE
EEEEEEEEEGGMNIRKGEKEVEKEVEEGEVREGEKDKEEENRGVPTAVLE
EGVMNILAAADPAVVTIKMVMAQLHENLGWDVSAHKPLITDIVMRNLES*
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mRNA from alignment at chr13:1025650..1027299+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO13G03430.1 ID=NO13G03430.1|Name=NO13G03430.1|organism=Nannochloropsis oceanica|type=mRNA|length=1650bp|location=Sequence derived from alignment at chr13:1025650..1027299+ (Nannochloropsis oceanica)
ATGGAAGCGCCTAGCAGCCCCATAGACAAGGAGCCTGAGATGAAGAAAGA
TGCTGCCGCTGCAATTGCTCCTGTCCCTCCTTGTCCCCCTTCTTCTGCCG
TAAATTATTGGGAAGCTTCCCCTGAGAAAGAGAAAGAAATTAAGCCGGCT
GCGGCAGACGCCATAGAAGGGGAGAAGAAAGACACCAGTGCTGCCGCTAT
TTATTCTCCTGTCGCTCCTGCTGCTCCTGTTGCTCCCCGATGTTCTCCTT
CCCCTGCCAAGAAACAGCGGGAAGCTTACCCTGCGGAAAAGGCGGCAGCT
AACACCATAGACAAGAAGGAGGATGAGGCGAGGGAAGAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCCCCAAAGACCCACGCCCATGCCCACCACGGCCA
GCGCCACCCTCCCTCCCTCCCCCCCTGCCCCTGGGCACTACTGGTCCGTC
CCCTCCGCCGGCGCTAAGCGGGAACGGAAGGCAGTCGAAACCCTCATCGT
TCGTGATCCCCGTGACACGCAGCCTGTCACCATCAAGCAGGGGAAAGGTT
CGAAGAAGCTGGGGGAGATGGAGACCTTTAGTCGAGAGATAGGGAAGATC
AGAAACAAGGACCCGTTTCTGAAGGTGCTGCACGGGCTGTGCTTTGGCCG
AGGGCAGGCCAAGGCTACCGAGGTAAAGGGACGCCTGAGGGAGTTCTCGG
GTTTGGTCTACGAAGAGGGGGAGGAGGAAAGGAGGGAAGGAGACTTGGCC
CGGGAAAAGGTGGAGGAGAAGGCGAGGAGAATGACAGTCGCAGAGTTGAA
GAGGGCCTGGGGAGTGCTGGGGGTGAGGACGAGAGAGGGAGGGAGGGCGG
GGGGAAAAAAGGAGGAGCTTGTGGAGGAGCTGGTAAACTGGCTGGAGTTG
CCTAGGGAGGAGGACGGAAGAAGGGAGGGAGGGAAGAAGGGGAGGAAGGT
GGCGGTGACGAAGAGGAGAAAGAGAAAGAGCAGTGGGGCGAAAGGAGAAG
AGCATGTGGAGGAGGAGGAGGGAAAAGAGGAGGAGGAGCAGCAGATGCGG
CAGAAAAAGATGAAGACGCTTGCGGTGGCTTTGAAGACGAAGGGAAAGAA
GAAGGAGACGAAGAAGAGGAGGAATTGCAAGCTGTTCAGTGCGTCGGCCA
ATATGCTGAGGAGAAAGGGGAAGGGAGGGAAGGAGGGGGGAAGGAAGGGG
TGGGGGGAGAAAATAGAGAATAAGGAAGAGGAGAAAGAAGAGGAAAAGGA
GGAGGAAGAATGTGACGATGAGATGAATGGATCGAAGAGAAGGAAGAAAA
AGGTGGTGGGGGCATCGGAAAAGGAGAAGGAAAAAGAGGAGGGAGTGGAG
GAGGAGGAGGAGGAGGAGGAAGAGGAAGGAGGAATGAATATAAGGAAAGG
CGAGAAAGAAGTAGAGAAGGAAGTAGAGGAGGGGGAGGTGAGGGAAGGTG
AAAAGGATAAAGAAGAGGAGAATAGGGGCGTCCCTACTGCTGTGCTGGAG
GAAGGGGTGATGAATATCCTTGCCGCTGCTGACCCTGCCGTCGTGACGAT
CAAGATGGTGATGGCGCAGCTGCACGAGAATCTGGGATGGGACGTGAGTG
CTCACAAGCCGCTCATTACGGACATTGTCATGCGAAACCTCGAAAGCTGA
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Coding sequence (CDS) from alignment at chr13:1025650..1027299+

>NO13G03430.1 ID=NO13G03430.1|Name=NO13G03430.1|organism=Nannochloropsis oceanica|type=CDS|length=1650bp|location=Sequence derived from alignment at chr13:1025650..1027299+ (Nannochloropsis oceanica)
ATGGAAGCGCCTAGCAGCCCCATAGACAAGGAGCCTGAGATGAAGAAAGA
TGCTGCCGCTGCAATTGCTCCTGTCCCTCCTTGTCCCCCTTCTTCTGCCG
TAAATTATTGGGAAGCTTCCCCTGAGAAAGAGAAAGAAATTAAGCCGGCT
GCGGCAGACGCCATAGAAGGGGAGAAGAAAGACACCAGTGCTGCCGCTAT
TTATTCTCCTGTCGCTCCTGCTGCTCCTGTTGCTCCCCGATGTTCTCCTT
CCCCTGCCAAGAAACAGCGGGAAGCTTACCCTGCGGAAAAGGCGGCAGCT
AACACCATAGACAAGAAGGAGGATGAGGCGAGGGAAGAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCCCCAAAGACCCACGCCCATGCCCACCACGGCCA
GCGCCACCCTCCCTCCCTCCCCCCCTGCCCCTGGGCACTACTGGTCCGTC
CCCTCCGCCGGCGCTAAGCGGGAACGGAAGGCAGTCGAAACCCTCATCGT
TCGTGATCCCCGTGACACGCAGCCTGTCACCATCAAGCAGGGGAAAGGTT
CGAAGAAGCTGGGGGAGATGGAGACCTTTAGTCGAGAGATAGGGAAGATC
AGAAACAAGGACCCGTTTCTGAAGGTGCTGCACGGGCTGTGCTTTGGCCG
AGGGCAGGCCAAGGCTACCGAGGTAAAGGGACGCCTGAGGGAGTTCTCGG
GTTTGGTCTACGAAGAGGGGGAGGAGGAAAGGAGGGAAGGAGACTTGGCC
CGGGAAAAGGTGGAGGAGAAGGCGAGGAGAATGACAGTCGCAGAGTTGAA
GAGGGCCTGGGGAGTGCTGGGGGTGAGGACGAGAGAGGGAGGGAGGGCGG
GGGGAAAAAAGGAGGAGCTTGTGGAGGAGCTGGTAAACTGGCTGGAGTTG
CCTAGGGAGGAGGACGGAAGAAGGGAGGGAGGGAAGAAGGGGAGGAAGGT
GGCGGTGACGAAGAGGAGAAAGAGAAAGAGCAGTGGGGCGAAAGGAGAAG
AGCATGTGGAGGAGGAGGAGGGAAAAGAGGAGGAGGAGCAGCAGATGCGG
CAGAAAAAGATGAAGACGCTTGCGGTGGCTTTGAAGACGAAGGGAAAGAA
GAAGGAGACGAAGAAGAGGAGGAATTGCAAGCTGTTCAGTGCGTCGGCCA
ATATGCTGAGGAGAAAGGGGAAGGGAGGGAAGGAGGGGGGAAGGAAGGGG
TGGGGGGAGAAAATAGAGAATAAGGAAGAGGAGAAAGAAGAGGAAAAGGA
GGAGGAAGAATGTGACGATGAGATGAATGGATCGAAGAGAAGGAAGAAAA
AGGTGGTGGGGGCATCGGAAAAGGAGAAGGAAAAAGAGGAGGGAGTGGAG
GAGGAGGAGGAGGAGGAGGAAGAGGAAGGAGGAATGAATATAAGGAAAGG
CGAGAAAGAAGTAGAGAAGGAAGTAGAGGAGGGGGAGGTGAGGGAAGGTG
AAAAGGATAAAGAAGAGGAGAATAGGGGCGTCCCTACTGCTGTGCTGGAG
GAAGGGGTGATGAATATCCTTGCCGCTGCTGACCCTGCCGTCGTGACGAT
CAAGATGGTGATGGCGCAGCTGCACGAGAATCTGGGATGGGACGTGAGTG
CTCACAAGCCGCTCATTACGGACATTGTCATGCGAAACCTCGAAAGCTGA
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Synonyms
Publications