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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr12 | genome | chr12:962751..965594 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO12G03520.1 ID=NO12G03520.1|Name=NO12G03520.1|organism=Nannochloropsis oceanica|type=mRNA|length=2701bp
GCTCTCATTTCACACCTCGCTACGTCTCATAGCAGCAGCGCGCGTGTATG
CATGTCGTCTCTGTCATTCTGGTACCTCTCCCAATTTCTGATTCTCTTTT
ATGGCTTGTACAAGATTCCCCCCCTTATGGATCAGACGGCGCACATTTAG
ACGAGTGTCAGCGTGCAACACCTGCGTCTCCAGCTTGAGCTCTCTCGCCG
ACTCGCCCCCCGAACGGGTTCTTTTTCCCAGCTCACGCACAGTACGATGC
AAGCTCATGATAATGTCGCCGCGACCAATGCACCTCGCACGCTAGGCACA
GAGAAGTAAAATTACATACGTACATAAACGTGTCATGGCGCATCAGCCGT
CGCATTTGTTGGGGGCCCTCCATGAAGACACTCTGCGGCGTCTCCTCGAG
GTGCATGCTGCAGCCCAGTCTCCTCTACCACCTCCACCTCCGCCCCCCTT
ACACCTTCAACCCCCCTCCTCACGCCCTTCATCATCGAAACGTCATGCCA
GCACCAGCAACAGTCGCAGCAGATTACGAGGCGAACACTTTTCCTCGCCT
TCACCGTCCTCTCCCGCCCCTACATTTTCCTCCACCAACCTCATCGAAGT
GGACCAAGAGCGCCGCGATTTAGAGGCTCGTACTTTGTCCTTGCGACGGG
CCTTGCTGCGGACACATTTTCATATTCATGAAGTGCAGGACGAGGAGCCA
CTACAACCACTTCCACTACCACCGCCACCACCCCAACCGCCAAGAGCAAG
CACTCTCGTCCCTCCCCCCCTTCCTACTTCCTCGCCACCTCTCTTCGATG
ACGACGTGGAAGGCCCTTATTCCGACGCATCTTACTCCGCCATTGCAGCC
GCAGCAGCTGCTGCTGTCGGGTGGGGATGGGCGCAGAAAAAGCAACGTGC
TGACAGGCACTGCGTTAGGGTTTTGGAGGGGCGCTCTCTGACCCGATGGT
TGAAGTGGCTGCTGCACCGACGCTTGGCCAAAGAAAGAGAAAACGAGATT
GGAGAGGCAATGACTTTCTACAAACAAGGACAGGCGCTGGCTCGCTTTCG
TCGACGGGCGAGTAATTCCCGCGTGCAGCACATGGCAATGCTCCGGGTGG
TCTTGATGGAAGGAGGAAGGGAGGGAGAAAGGGAGGGAGGAAGGGAGGGA
GAGCAAGAGCAGCCTTTACCCTCCTTTTCCTCTTCCGTTTTTAAATACCA
TCAACTACAACAGGAGATTTCCAATTCTTGTTTTCTCTTTGCTTCTCTCA
CCACCACCTACACCCGCGCTGCCCTCCGCCTCCTCCTCACCAGGGGCTTC
CACCGCTTGCACCGGCATCACGTCACCTCAACCCACATTCGCTCCCTCAA
GCGCCACGCCATCCAAGATGCCCTCCTTCCTTCTCTCCTTCGCAAGGGGC
TTCAGGCTCTACGACGCAACAACAAGCAAGCCCGTCGGCGTCTCTTACAT
AAAAAAGCAGCAGACATGAGGAAGTACCAGCAGCTGCAGCAGCAGCAGCG
GGCACTACAGCAGTGGTGCGCGTGGAGAAATAGAAGAAGGAACCGGAAGC
TATTAATGAAGAAGGGAGAACTGTGGTGGGATTTGAGATTGAAAGAGGGA
GGGTTGCGAAGGTGGGGGGGAGGGTGGTGTGAGGCGAGGAGGGAGGGAAG
GAGGCTGGTGAGAGGGATGGATGCGTGGCATGAGCAGCGGCTGCAGCAAA
GGGGGGTAAAGACGTGGCTTTGTATGTTTGTAGTCCGTCGGGAGGAGAGG
AGGATGTTGAAGAGGGGGAAGGAATGGAGGGAGGGAGGGAGGATGGCTTG
GGGAAAGTGGTGCAGGGTGTTGGGGAGGATGAGGGGGAGGAGGAGTGGGG
AGAAGAGGTTGGCGCGGGCGGCGGGACGGATTTGTGAGAGGAGAAGAATG
AAACGAGCGCTGGTGGTGAGATGGAGGGAGAGGTGGATGCTTGGGGTGAA
AGAGAAGGAGAGGGCGAGGGGGAGGAAGGGGGAGGGGCTGTGGAGGGGGA
GGGCTGGAGGGAGGGCGGTGGAGGCATTGAGAGCCTGGGCAGCTCGAAGG
ATGCTTAGACAGGCTCTTGAGAAGGCACAGAGAGGGGGGGAGGAGGAGTT
GCAAGCAGGATCAGCACTGCCCTGGCGAGTGATGCAACTGTTGAAAAAAT
GTGAGGGATGGAAGGTGATAGTGGAGGAGGAGAAAGGGTACCGGGCGCTC
TTGGTTAGAGGGGAGGAGCATTTTGAGAGCCGTGGGGAAGAAAGAGGGAT
ACTTGCATGGGTGGCTTATGTGGTCGCTCTCAAGATGCAAAGGGCGGCTT
TGAAGAGGGTGGAGCGCTCAATGGATCCTCGGTGTCATCGCCAGCAGGAG
CAGCAGGAGGAACAGCAGCAGGAGGAGCAGCAGCTGTCTGCACTCTCCCC
ACGCTTACCATCCGCATCATTCCTTCCCTCTCTCCCTCCCCCCACCTCCT
CCACGCCGCCTACACCCGCCTCGCTCACCGAAGGCTCCATCTCGCATTGG
ACAGATGGAAGTTTCATTCCCACCAGCAGGGGCGCCTCTCCTCCTCCCTC
GTGCGTGCCGGCTGTCATTACTTACTCACGCAATGGCAGGGCCTGCGACG
GGCGTTACAGCAACAAGAGCGGAGAGAAACGGCAGCACGTATGGCTATTG
AAAAGGTGGTGGCTCCCCACCAGAGGAGAAGGGGATTTAGAGTATGGTTG
A back to topprotein sequence of NO12G03520.1 >NO12G03520.1-protein ID=NO12G03520.1-protein|Name=NO12G03520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=789bp
MAHQPSHLLGALHEDTLRRLLEVHAAAQSPLPPPPPPPLHLQPPSSRPSS
SKRHASTSNSRSRLRGEHFSSPSPSSPAPTFSSTNLIEVDQERRDLEART
LSLRRALLRTHFHIHEVQDEEPLQPLPLPPPPPQPPRASTLVPPPLPTSS
PPLFDDDVEGPYSDASYSAIAAAAAAAVGWGWAQKKQRADRHCVRVLEGR
SLTRWLKWLLHRRLAKERENEIGEAMTFYKQGQALARFRRRASNSRVQHM
AMLRVVLMEGGREGEREGGREGEQEQPLPSFSSSVFKYHQLQQEISNSCF
LFASLTTTYTRAALRLLLTRGFHRLHRHHVTSTHIRSLKRHAIQDALLPS
LLRKGLQALRRNNKQARRRLLHKKAADMRKYQQLQQQQRALQQWCAWRNR
RRNRKLLMKKGELWWDLRLKEGGLRRWGGGWCEARREGRRLVRGMDAWHE
QRLQQRGVKTWLCMFVVRREERRMLKRGKEWREGGRMAWGKWCRVLGRMR
GRRSGEKRLARAAGRICERRRMKRALVVRWRERWMLGVKEKERARGRKGE
GLWRGRAGGRAVEALRAWAARRMLRQALEKAQRGGEEELQAGSALPWRVM
QLLKKCEGWKVIVEEEKGYRALLVRGEEHFESRGEERGILAWVAYVVALK
MQRAALKRVERSMDPRCHRQQEQQEEQQQEEQQLSALSPRLPSASFLPSL
PPPTSSTPPTPASLTEGSISHWTDGSFIPTSRGASPPPSCVPAVITYSRN
GRACDGRYSNKSGEKRQHVWLLKRWWLPTRGEGDLEYG* back to topmRNA from alignment at chr12:962751..965594- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO12G03520.1 ID=NO12G03520.1|Name=NO12G03520.1|organism=Nannochloropsis oceanica|type=mRNA|length=2844bp|location=Sequence derived from alignment at chr12:962751..965594- (Nannochloropsis oceanica)
GCTCTCATTTCACACCTCGCTACGTCTCATAGCAGCAGCGCGCGTGTATG
CATGTCGTCTCTGTCATTCTGGTACCTCTCCCAATTTCTGATTCTCTTTT
ATGGCTTGTACAAGATTCCCCCCCTTATGGTAGGTGGTTGTCCCTCCCTT
TAGCCTCCCTCCTCTCCTCTCCTCTCCTCTACTTTCCAGGCCTTCAAAGG
CCACTGCCATCGCCCGCACCCTTCCTCCTTGACCACTAACACCATCTCTG
TATCACACACGCACACCGACAGGATCAGACGGCGCACATTTAGACGAGTG
TCAGCGTGCAACACCTGCGTCTCCAGCTTGAGCTCTCTCGCCGACTCGCC
CCCCGAACGGGTTCTTTTTCCCAGCTCACGCACAGTACGATGCAAGCTCA
TGATAATGTCGCCGCGACCAATGCACCTCGCACGCTAGGCACAGAGAAGT
AAAATTACATACGTACATAAACGTGTCATGGCGCATCAGCCGTCGCATTT
GTTGGGGGCCCTCCATGAAGACACTCTGCGGCGTCTCCTCGAGGTGCATG
CTGCAGCCCAGTCTCCTCTACCACCTCCACCTCCGCCCCCCTTACACCTT
CAACCCCCCTCCTCACGCCCTTCATCATCGAAACGTCATGCCAGCACCAG
CAACAGTCGCAGCAGATTACGAGGCGAACACTTTTCCTCGCCTTCACCGT
CCTCTCCCGCCCCTACATTTTCCTCCACCAACCTCATCGAAGTGGACCAA
GAGCGCCGCGATTTAGAGGCTCGTACTTTGTCCTTGCGACGGGCCTTGCT
GCGGACACATTTTCATATTCATGAAGTGCAGGACGAGGAGCCACTACAAC
CACTTCCACTACCACCGCCACCACCCCAACCGCCAAGAGCAAGCACTCTC
GTCCCTCCCCCCCTTCCTACTTCCTCGCCACCTCTCTTCGATGACGACGT
GGAAGGCCCTTATTCCGACGCATCTTACTCCGCCATTGCAGCCGCAGCAG
CTGCTGCTGTCGGGTGGGGATGGGCGCAGAAAAAGCAACGTGCTGACAGG
CACTGCGTTAGGGTTTTGGAGGGGCGCTCTCTGACCCGATGGTTGAAGTG
GCTGCTGCACCGACGCTTGGCCAAAGAAAGAGAAAACGAGATTGGAGAGG
CAATGACTTTCTACAAACAAGGACAGGCGCTGGCTCGCTTTCGTCGACGG
GCGAGTAATTCCCGCGTGCAGCACATGGCAATGCTCCGGGTGGTCTTGAT
GGAAGGAGGAAGGGAGGGAGAAAGGGAGGGAGGAAGGGAGGGAGAGCAAG
AGCAGCCTTTACCCTCCTTTTCCTCTTCCGTTTTTAAATACCATCAACTA
CAACAGGAGATTTCCAATTCTTGTTTTCTCTTTGCTTCTCTCACCACCAC
CTACACCCGCGCTGCCCTCCGCCTCCTCCTCACCAGGGGCTTCCACCGCT
TGCACCGGCATCACGTCACCTCAACCCACATTCGCTCCCTCAAGCGCCAC
GCCATCCAAGATGCCCTCCTTCCTTCTCTCCTTCGCAAGGGGCTTCAGGC
TCTACGACGCAACAACAAGCAAGCCCGTCGGCGTCTCTTACATAAAAAAG
CAGCAGACATGAGGAAGTACCAGCAGCTGCAGCAGCAGCAGCGGGCACTA
CAGCAGTGGTGCGCGTGGAGAAATAGAAGAAGGAACCGGAAGCTATTAAT
GAAGAAGGGAGAACTGTGGTGGGATTTGAGATTGAAAGAGGGAGGGTTGC
GAAGGTGGGGGGGAGGGTGGTGTGAGGCGAGGAGGGAGGGAAGGAGGCTG
GTGAGAGGGATGGATGCGTGGCATGAGCAGCGGCTGCAGCAAAGGGGGGT
AAAGACGTGGCTTTGTATGTTTGTAGTCCGTCGGGAGGAGAGGAGGATGT
TGAAGAGGGGGAAGGAATGGAGGGAGGGAGGGAGGATGGCTTGGGGAAAG
TGGTGCAGGGTGTTGGGGAGGATGAGGGGGAGGAGGAGTGGGGAGAAGAG
GTTGGCGCGGGCGGCGGGACGGATTTGTGAGAGGAGAAGAATGAAACGAG
CGCTGGTGGTGAGATGGAGGGAGAGGTGGATGCTTGGGGTGAAAGAGAAG
GAGAGGGCGAGGGGGAGGAAGGGGGAGGGGCTGTGGAGGGGGAGGGCTGG
AGGGAGGGCGGTGGAGGCATTGAGAGCCTGGGCAGCTCGAAGGATGCTTA
GACAGGCTCTTGAGAAGGCACAGAGAGGGGGGGAGGAGGAGTTGCAAGCA
GGATCAGCACTGCCCTGGCGAGTGATGCAACTGTTGAAAAAATGTGAGGG
ATGGAAGGTGATAGTGGAGGAGGAGAAAGGGTACCGGGCGCTCTTGGTTA
GAGGGGAGGAGCATTTTGAGAGCCGTGGGGAAGAAAGAGGGATACTTGCA
TGGGTGGCTTATGTGGTCGCTCTCAAGATGCAAAGGGCGGCTTTGAAGAG
GGTGGAGCGCTCAATGGATCCTCGGTGTCATCGCCAGCAGGAGCAGCAGG
AGGAACAGCAGCAGGAGGAGCAGCAGCTGTCTGCACTCTCCCCACGCTTA
CCATCCGCATCATTCCTTCCCTCTCTCCCTCCCCCCACCTCCTCCACGCC
GCCTACACCCGCCTCGCTCACCGAAGGCTCCATCTCGCATTGGACAGATG
GAAGTTTCATTCCCACCAGCAGGGGCGCCTCTCCTCCTCCCTCGTGCGTG
CCGGCTGTCATTACTTACTCACGCAATGGCAGGGCCTGCGACGGGCGTTA
CAGCAACAAGAGCGGAGAGAAACGGCAGCACGTATGGCTATTGAAAAGGT
GGTGGCTCCCCACCAGAGGAGAAGGGGATTTAGAGTATGGTTGA back to topCoding sequence (CDS) from alignment at chr12:962751..965594- >NO12G03520.1 ID=NO12G03520.1|Name=NO12G03520.1|organism=Nannochloropsis oceanica|type=CDS|length=2367bp|location=Sequence derived from alignment at chr12:962751..965594- (Nannochloropsis oceanica)
ATGGCGCATCAGCCGTCGCATTTGTTGGGGGCCCTCCATGAAGACACTCT
GCGGCGTCTCCTCGAGGTGCATGCTGCAGCCCAGTCTCCTCTACCACCTC
CACCTCCGCCCCCCTTACACCTTCAACCCCCCTCCTCACGCCCTTCATCA
TCGAAACGTCATGCCAGCACCAGCAACAGTCGCAGCAGATTACGAGGCGA
ACACTTTTCCTCGCCTTCACCGTCCTCTCCCGCCCCTACATTTTCCTCCA
CCAACCTCATCGAAGTGGACCAAGAGCGCCGCGATTTAGAGGCTCGTACT
TTGTCCTTGCGACGGGCCTTGCTGCGGACACATTTTCATATTCATGAAGT
GCAGGACGAGGAGCCACTACAACCACTTCCACTACCACCGCCACCACCCC
AACCGCCAAGAGCAAGCACTCTCGTCCCTCCCCCCCTTCCTACTTCCTCG
CCACCTCTCTTCGATGACGACGTGGAAGGCCCTTATTCCGACGCATCTTA
CTCCGCCATTGCAGCCGCAGCAGCTGCTGCTGTCGGGTGGGGATGGGCGC
AGAAAAAGCAACGTGCTGACAGGCACTGCGTTAGGGTTTTGGAGGGGCGC
TCTCTGACCCGATGGTTGAAGTGGCTGCTGCACCGACGCTTGGCCAAAGA
AAGAGAAAACGAGATTGGAGAGGCAATGACTTTCTACAAACAAGGACAGG
CGCTGGCTCGCTTTCGTCGACGGGCGAGTAATTCCCGCGTGCAGCACATG
GCAATGCTCCGGGTGGTCTTGATGGAAGGAGGAAGGGAGGGAGAAAGGGA
GGGAGGAAGGGAGGGAGAGCAAGAGCAGCCTTTACCCTCCTTTTCCTCTT
CCGTTTTTAAATACCATCAACTACAACAGGAGATTTCCAATTCTTGTTTT
CTCTTTGCTTCTCTCACCACCACCTACACCCGCGCTGCCCTCCGCCTCCT
CCTCACCAGGGGCTTCCACCGCTTGCACCGGCATCACGTCACCTCAACCC
ACATTCGCTCCCTCAAGCGCCACGCCATCCAAGATGCCCTCCTTCCTTCT
CTCCTTCGCAAGGGGCTTCAGGCTCTACGACGCAACAACAAGCAAGCCCG
TCGGCGTCTCTTACATAAAAAAGCAGCAGACATGAGGAAGTACCAGCAGC
TGCAGCAGCAGCAGCGGGCACTACAGCAGTGGTGCGCGTGGAGAAATAGA
AGAAGGAACCGGAAGCTATTAATGAAGAAGGGAGAACTGTGGTGGGATTT
GAGATTGAAAGAGGGAGGGTTGCGAAGGTGGGGGGGAGGGTGGTGTGAGG
CGAGGAGGGAGGGAAGGAGGCTGGTGAGAGGGATGGATGCGTGGCATGAG
CAGCGGCTGCAGCAAAGGGGGGTAAAGACGTGGCTTTGTATGTTTGTAGT
CCGTCGGGAGGAGAGGAGGATGTTGAAGAGGGGGAAGGAATGGAGGGAGG
GAGGGAGGATGGCTTGGGGAAAGTGGTGCAGGGTGTTGGGGAGGATGAGG
GGGAGGAGGAGTGGGGAGAAGAGGTTGGCGCGGGCGGCGGGACGGATTTG
TGAGAGGAGAAGAATGAAACGAGCGCTGGTGGTGAGATGGAGGGAGAGGT
GGATGCTTGGGGTGAAAGAGAAGGAGAGGGCGAGGGGGAGGAAGGGGGAG
GGGCTGTGGAGGGGGAGGGCTGGAGGGAGGGCGGTGGAGGCATTGAGAGC
CTGGGCAGCTCGAAGGATGCTTAGACAGGCTCTTGAGAAGGCACAGAGAG
GGGGGGAGGAGGAGTTGCAAGCAGGATCAGCACTGCCCTGGCGAGTGATG
CAACTGTTGAAAAAATGTGAGGGATGGAAGGTGATAGTGGAGGAGGAGAA
AGGGTACCGGGCGCTCTTGGTTAGAGGGGAGGAGCATTTTGAGAGCCGTG
GGGAAGAAAGAGGGATACTTGCATGGGTGGCTTATGTGGTCGCTCTCAAG
ATGCAAAGGGCGGCTTTGAAGAGGGTGGAGCGCTCAATGGATCCTCGGTG
TCATCGCCAGCAGGAGCAGCAGGAGGAACAGCAGCAGGAGGAGCAGCAGC
TGTCTGCACTCTCCCCACGCTTACCATCCGCATCATTCCTTCCCTCTCTC
CCTCCCCCCACCTCCTCCACGCCGCCTACACCCGCCTCGCTCACCGAAGG
CTCCATCTCGCATTGGACAGATGGAAGTTTCATTCCCACCAGCAGGGGCG
CCTCTCCTCCTCCCTCGTGCGTGCCGGCTGTCATTACTTACTCACGCAAT
GGCAGGGCCTGCGACGGGCGTTACAGCAACAAGAGCGGAGAGAAACGGCA
GCACGTATGGCTATTGAAAAGGTGGTGGCTCCCCACCAGAGGAGAAGGGG
ATTTAGAGTATGGTTGA back to top
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