NO04G03300.3, NO04G03300.3 (mRNA) Nannochloropsis oceanica

Overview
NameNO04G03300.3
Unique NameNO04G03300.3
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5106
Alignment locationchr4:913910..919494 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:913910..919494 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO04G03300.3 vs.
Match: EWM28746.1 (dna topoisomerase 6 subunit b [Nannochloropsis gaditana])

HSP 1 Score: 888.6 bits (2295), Expect = 9.900e-255
Identity = 448/550 (81.45%), Postives = 487/550 (88.55%), Query Frame = 0
Query:   26 MAPKNKAEVVESKTPAEFFSEHQSICGFDNPGRSLYTTVRELVENALDAAESIEVLPDVSITIEELTEEELNELRGMESRERVDVGLFHKASGGRKKYGGGGGAAVATDKHDNDLKPD--EKQLQVSAPVALPPKKKERGT-SYYRVTCEDNGCGMAHDRIPDMLGRVLSSSKYGVRQTRGKFGLGSKMALIWSKKSTGLPIEVRSAHSTETSRAPGYVSRCILDIDIYRNEPAVKLHEKVANPQQWRGTRIDVVVEGNWSTYKTHIMTYFQQLAIITPYAKMDFTFRALSNAAREVVTQYARRSEQMPSPAQEVKHHPSSVNHLIIQQLLKRTKAKSLLVFLSAELACVNRPLALRIVKELGSGFTEDMGPDKMDANKTIRLTSMLKSVSIFKPPDGSCLSPAGEYNLRLGIMKELHPDYVATVSEQAAAFEGHPFIVEAGVSLGGQAVKDGINVYRFANRIPLLFEAGNDVVTQVANRRIHWQSYKIDPKRDRVGVFVSIVSTKIPFKGTGKEYIGDDTEEIRKCVKNALQRCCKQLKQHLLTRNAAR 573
            MA KN+ EVVESKTPAEFFSEHQSICGFDNPGRSLYTTVRELVENALDAAESI+ LP VS+ IEE+TE+ELNELRGMESRERVD+GLFHKA+G R+    GG       ++  +L  D  EKQ+  ++      KK +RG  +YYRVTCEDNGCGMAH++IPDMLGRVLSSSKYGVRQTRGKFGLGSKMALIWSKKSTGLPIEVRSAHS E +    Y+S C+LDIDIYRN+P VKLHEKVAN + WRGTRIDVVVEGNWSTYKTHIMTYFQQLAIITPYA M+FTFR LSNA+REV+TQYARRSE MP PAQEVKHHPSS+NHLIIQQL+KRT  K+ L FL  ELACV RPLA RIVKELG+GF E+M P+ +DANKTIRLTSMLKS+SIFK PDGSCLSPAGEYNLRLGIMKELHPDYVATVSEQAAAFEGHPF+VEAGVSLGG A+KDGINVYRFANRIPLLFEAGNDVVTQVANRRI+WQSYKIDPKRDR+GVFVSIVSTKIPFKGTGKEYIGDDTE IRK VK+ALQRCCKQLKQHLLTRNAAR
Sbjct:    1 MARKNRIEVVESKTPAEFFSEHQSICGFDNPGRSLYTTVRELVENALDAAESIQELPYVSVVIEEITEDELNELRGMESRERVDLGLFHKATGKRRS---GGEIQEVLAENMKELHSDALEKQMGQNSAALSNKKKGDRGARNYYRVTCEDNGCGMAHEKIPDMLGRVLSSSKYGVRQTRGKFGLGSKMALIWSKKSTGLPIEVRSAHSLEENHPAAYISHCVLDIDIYRNQPFVKLHEKVANIKGWRGTRIDVVVEGNWSTYKTHIMTYFQQLAIITPYAHMEFTFRTLSNASREVITQYARRSEHMPPPAQEVKHHPSSINHLIIQQLIKRTSTKTFLNFLCTELACVTRPLAARIVKELGNGFAENMVPEDIDANKTIRLTSMLKSISIFKLPDGSCLSPAGEYNLRLGIMKELHPDYVATVSEQAAAFEGHPFVVEAGVSLGGNALKDGINVYRFANRIPLLFEAGNDVVTQVANRRINWQSYKIDPKRDRIGVFVSIVSTKIPFKGTGKEYIGDDTEAIRKSVKSALQRCCKQLKQHLLTRNAAR 547          
The following BLAST results are available for this feature:
BLAST of NO04G03300.3 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM28746.19.900e-25581.45dna topoisomerase 6 subunit b [Nannochloropsis gad... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G03300NO04G03300Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO04G03300.3NO04G03300.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO04G03300.3.cds1NO04G03300.3.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO04G03300.3.cds2NO04G03300.3.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO04G03300.3.cds3NO04G03300.3.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO04G03300.3.cds4NO04G03300.3.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO04G03300.3 ID=NO04G03300.3|Name=NO04G03300.3|organism=Nannochloropsis oceanica|type=mRNA|length=5106bp
AAACAAATCGCTTCATGACCCCTGCGTGCAGTCAAGTGAAAGTGGTGCGA
TGGTAAGCAGAAAGCTAGATACATGGTAAAGCAAGCCAAGGCATGATGAA
AAGTTATAACGTGTGGTGAACACCACGGTGTTTGTCGATCGGATGGCGAA
ACCGAGGGAGCGAACAATAACGAGGTATTCGAGACAATAATAAAAATAAT
AACCATGGCATTCCCCTTGTTCGAGATGTGTGTATCCACAATTGCGGCAC
CTCTAAGAGGGCATACGCATTCGTCCTGTTAAGGGAAGAGGCATAGGGGT
TTATTTCTGGCTGCTTATGAGTCGAAACATGGACATCATACCGCTTGTCG
AATGCTTTCACCCGTCACGCACGGTACTTATCCTCGTCGCCTCCTTTTTC
TCCCCAACGTGGAGGCAGGGAATTTACCCAGCTGGGTAATCTCGGCTGCC
TCGGCTTGGCGCCGTCATGGTCTCTTCTTACCTCTTCTCATCTCCACCTG
CTGGCCTCCTCTTCTTCCTCCAGATACATCATACAGCGACCATGGCGCCC
AAGAACAAAGCCGAGGTCGTGGAGAGCAAGACGCCGGCCGAGTTCTTCAG
TGAGCATCAGTCAATTTGCGGTTTTGATAACCCCGGGAGGTCCCTGTACA
CAACCGTGCGAGAGCTGGTGGAGAACGCGCTGGACGCGGCCGAGTCCATC
GAGGTACTTCCTGACGTGTCAATCACCATCGAGGAGCTGACGGAAGAGGA
GCTGAACGAGTTGCGTGGCATGGAGAGTCGGGAAAGGGTGGACGTGGGTC
TCTTCCATAAAGCTTCAGGGGGAAGGAAGAAATACGGCGGCGGTGGAGGG
GCAGCGGTGGCCACAGACAAACATGACAACGACTTAAAGCCCGACGAGAA
GCAGCTGCAGGTGTCCGCGCCGGTTGCATTACCACCGAAGAAAAAGGAGC
GGGGCACGAGTTATTATCGGGTGACGTGTGAGGACAACGGGTGCGGCATG
GCCCATGACCGGATACCGGACATGCTCGGCCGCGTCCTTTCGAGCAGCAA
ATATGGAGTGCGGCAGACGCGGGGAAAGTTCGGGTTGGGGTCCAAGATGG
CCTTAATCTGGTCCAAGAAAAGCACGGGGCTGCCAATCGAGGTGCGGAGC
GCGCATTCGACAGAGACAAGCCGTGCGCCAGGATACGTCTCCCGGTGTAT
TTTGGACATTGACATCTATCGGAATGAGCCCGCGGTGAAGCTGCACGAGA
AGGTGGCCAACCCCCAACAATGGCGAGGGACGCGGATCGACGTGGTAGTG
GAAGGGAACTGGAGCACGTACAAGACACATATTATGACCTACTTTCAGCA
GCTGGCTATCATCACACCCTACGCCAAAATGGACTTCACCTTCCGCGCCC
TCTCTAACGCGGCCCGCGAAGTCGTCACGCAATACGCCCGCCGCTCCGAG
CAGATGCCATCCCCCGCCCAAGAGGTCAAACATCACCCTTCTTCCGTCAA
CCACCTCATCATCCAGCAGCTCTTGAAGCGCACCAAGGCTAAGAGTCTTC
TTGTCTTTCTCTCCGCCGAGCTCGCCTGCGTCAACCGTCCCCTGGCCTTG
CGCATCGTTAAGGAATTAGGGAGTGGTTTCACCGAGGATATGGGGCCCGA
TAAAATGGATGCAAATAAAACCATTCGGCTGACGTCCATGCTCAAGTCGG
TCTCGATTTTCAAGCCCCCCGATGGCAGCTGTCTTAGCCCGGCCGGCGAG
TATAACCTGCGCCTGGGAATCATGAAGGAGCTGCACCCGGACTATGTTGC
GACCGTCAGCGAGCAAGCTGCGGCATTTGAGGGCCACCCCTTCATTGTGG
AGGCCGGCGTGTCCCTGGGCGGGCAGGCCGTAAAGGATGGCATCAACGTC
TATCGGTTTGCCAATCGCATCCCTCTTCTTTTCGAGGCCGGCAACGACGT
TGTCACTCAAGTCGCTAATCGCCGCATCCATTGGCAGTCCTACAAGATCG
ACCCCAAGCGGGACCGCGTGGGTGTCTTTGTCTCTATCGTCAGCACCAAG
ATCCCCTTTAAGGGCACGGGGAAGGAGTACATCGGTGACGACACGGAGGA
GATCCGCAAGTGCGTTAAGAACGCCTTGCAGCGGTGTTGCAAGCAGTTGA
AACAGCACCTGCTTACGCGCAATGCCGCCAGGTGAGTACGAAGAAGAAGG
AGAAGAAGAAGTGAAAGTGTCGCTGCTGGAGCAGAGAGTACGAAAGGAGA
GAGTAGGGCGGTGGTCAATCATTCTTTGTATAACAATCATCTTTTTGTTG
CCCTTAGTTCCGATCATTTTCAATCCTCCCATCTCCTTTTACACTCTTAA
AAGAGACGTCCGGGAGCGAAAGAAGAACCTCCTGCGCTACACACCCGACG
TGGCCCGGGCCATCGCCGTGGTTCTAAACGGCATCAACAAGCGCAAGCGC
ATGGTTCAGGGCGAGTTGGTGGAGGAAGACGACGGGGGGGGTCGGGGCAA
GCAACCCCAGCGGCCTAAGGATGCCAAACAGCTGAAGCTGTACGTAGAGA
TGGAACGCAAGTGGGCGGCTGCTGCGGGGGGGGGATCCTCGTCGTTGTTG
GGGCTCTTGGGGGAGGCGGAAGACTTGGCTACCTTTGATGTACGTATGCT
ATGCTTTGGCCTGATGGAGGCTTTGATTGATCTTGGATTGAGCTTGGTAA
TTGAATCTATCTACCTCTCTGCCGATTTTTCCCATCAATCATATAAACCT
AATCCTAATGATTATAAAGACTAAAAACACATGAAAAAAATAAAAATATT
GATTTATTGGGTCAATCTCATGGGGAATTTTCCTTTCAACGCCTGAATCA
CTCAACCAGCCCTCTACCACTTTCCTACCTGCAGAAATTGCTACGCGCCA
GGCTGGAGTCCGCCATCGAGAAGGTAGACCTAGAGAGCGCCTTGGAAGCC
GCTGCCATCGACCGAGGCAAGGGCGGACCCGCATCCAAGGAGTCCCTCTT
CATCGCCCCGCTGCGAGCTGGCACGCACTTCACAACACCGCTGGTCAACT
CTGTGTGTAGCATACGCTTTTTTTCGTCCGCGATGGTGGTGTATAAATAA
GAGGACGGATTAGAAGGGGTCCGTATGTGTAAAGCATCATCTTGCCATGA
CAAAACCGAATAGGTGAATGGAAGAGATGGGAAGCGGGTTGAAGAGGAAT
AACAAAGAAAAGTGTAAGAGGAAAAGATAAGAAGCAAACAGCTGTAATTG
TGCTATCTTTTGTTACATAAATATGCGCGTTTTGGGCTTCTGTTTCTCCC
TTCGCTCCGGTGCACACAAGCGGGCCCTTATCCGCTACGTTGCATCTCCG
TCTGTGAATTCTTCCAGTCGCTTCTCTTACACATCTCTTTGTCTTCGATT
TTCCCTTTCTACCCTCCTCTCCTTCCCTGAAGCTAAGCAGCCTAGCTAGG
GGCCCTCCGTCTCCTCCTCAGACATGATACACAGCTGCTGGATGGCCTCC
GCGCGTTGTTTCACCTCCTCCTGCAACTGCTGTTTGGTTGCGCTGGCGAT
TTCCATGATCGCTGCAAGGGCTTGCTTATTCCTTTCCATTTGCTCTTGGT
CCTCTCTGCTACCGGTAGCTGCCACAGCATTTATGATGATACTATCCTTG
AGCTCCGTGATCTGTAGATAGGTGGGTTTGGAGGGGGAGAAACGATGGGT
CAACTGAGGATGGATGTGCCTACGTTCAGATGGCTGACAATCACAACAAA
TGACACCTTTGGAACGCCTATCCCCTCCACTGTGCAGACACAAGCCATCC
AAGAGATAGGAGGATGAGAGGGAGTAATCTTGACGTACCTTGTCTTCAAT
CCTTACGATGGCCCCATTGACGAAGGTAGACATGAAACTCGTCTCACGGG
TCAGCTGGGCGGTCGTGTCTTCTCGCACCTGCTGCAACCTCTCTTGCACC
TTTTTTTCCACCTCCTCGCTGATCATCCCAGCAAGCTTTTCATGGACCGC
CGAGGAGTACAAAATTTGCTGTGTGGAATAAAAAAACAGGGGGGAAAGGG
AGGGTGTCCGTATGTGAGTTTTATCAATTACGTCGCGCTGCTCTCTTCCC
CTGCTCCTCCCCGCCCAAGTATATGTCCCTCCATAGCCAGCGCATAAACC
CACCTCAAGAATGGTCACATCTAGCAACTCGTCCCTGTTCGTGGCGATGA
TGGAAGCTGTTTCAGCGGCAGGGGGCTTGCGAGCGGTATCGGGCAAAGTT
ATAGACTGAATGCACTCGTCGTTGATGTTGGTGCTGTTGATGCTTCCGCT
GTTTCTGCGAGTGCTGGTATAAGTGTTGGTGTTATCCACTGGGGAGGTGA
TGGTGCGGCGCGACATGCTGTGAGTGGACGGGCAGAGCATTTGGGGTACT
GTTGCGGCACCTCGAGGAGAGGACAGGTTGTCTGCTCTTCTGGTGTTGGG
GGACTGCGCAAGTGCACCTAGGACAGAGGAGGCTGTCGAGGCAGAGGCAA
GCGGAGTAGAATGGAGTTTAGGAGAGTATGCGAGGGGTGCCTCGAAATTA
TCGATGACCTTGATGTTGCCGAGGTGCTGGAAAAGCCCGTGCTTTGGTTC
GCAGGTAAAGTACCTTTCTCCTTTAAATTCGCCGTCATGGTTGCCACTTG
GCTCGTCCAGTCGGATGCCTGCCCACATGGTTTCAGGGCGGGTGCTAAAG
TGCGTCTGGCCTACATACAGCACCCTGCCAAACAACGTTTTCTGCTTGTG
CGACACTTTGACGCGGGAACCGACCCGGGGGGTGGAGGGGTCTAAAGGGC
TTCGGGGAAGTGGCAGCTCAGCACGATGGTGCGAGGAAGGAGGAAGCGCA
GGAATAGCAGCATAAAGGGCTTGATTGTTAGCAGCAGCGGGGCTGCGACT
CCCGAAACTGCTGCGGGGCGAAGACGGGCGAATACTCCCTGTGTGGCTAC
TTGCCCGCCTGTGAGGCAAGGAGGGGGACAAAATGTCGTTTTCGACGCGA
CTGTGGACAGGAGGAGGACGCATCAATCTCCCTTTGAATCTAGATGTCAA
CAATGTACAGCAACCCCGAAGTCTGTTGGAGCCGTCTGCACAGGGGCGAC
GCCTGT
back to top

protein sequence of NO04G03300.3

>NO04G03300.3-protein ID=NO04G03300.3-protein|Name=NO04G03300.3|organism=Nannochloropsis oceanica|type=polypeptide|length=573bp
MVSSYLFSSPPAGLLFFLQIHHTATMAPKNKAEVVESKTPAEFFSEHQSI
CGFDNPGRSLYTTVRELVENALDAAESIEVLPDVSITIEELTEEELNELR
GMESRERVDVGLFHKASGGRKKYGGGGGAAVATDKHDNDLKPDEKQLQVS
APVALPPKKKERGTSYYRVTCEDNGCGMAHDRIPDMLGRVLSSSKYGVRQ
TRGKFGLGSKMALIWSKKSTGLPIEVRSAHSTETSRAPGYVSRCILDIDI
YRNEPAVKLHEKVANPQQWRGTRIDVVVEGNWSTYKTHIMTYFQQLAIIT
PYAKMDFTFRALSNAAREVVTQYARRSEQMPSPAQEVKHHPSSVNHLIIQ
QLLKRTKAKSLLVFLSAELACVNRPLALRIVKELGSGFTEDMGPDKMDAN
KTIRLTSMLKSVSIFKPPDGSCLSPAGEYNLRLGIMKELHPDYVATVSEQ
AAAFEGHPFIVEAGVSLGGQAVKDGINVYRFANRIPLLFEAGNDVVTQVA
NRRIHWQSYKIDPKRDRVGVFVSIVSTKIPFKGTGKEYIGDDTEEIRKCV
KNALQRCCKQLKQHLLTRNAAR*
back to top

mRNA from alignment at chr4:913910..919494-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO04G03300.3 ID=NO04G03300.3|Name=NO04G03300.3|organism=Nannochloropsis oceanica|type=mRNA|length=5585bp|location=Sequence derived from alignment at chr4:913910..919494- (Nannochloropsis oceanica)
AAACAAATCGCTTCATGACCCCTGCGTGCAGTCAAGTGAAAGTGGTGCGA TGGTAAGCAGAAAGCTAGATACATGGTAAAGCAAGCCAAGGCATGATGAA AAGTTATAACGTGTGGTGAACACCACGGTGTTTGTCGATCGGATGGCGAA ACCGAGGGAGCGAACAATAACGAGGTATTCGAGACAATAATAAAAATAAT AACCATGGCATTCCCCTTGTTCGAGATGTGTGTATCCACAATTGCGGCAC CTCTAAGAGGGCATACGCATTCGTCCTGTTAAGGGAAGAGGCATAGGGGT TTATTTCTGGCTGCTTATGAGTCGAAACATGGACATCATACCGCTTGTCG AATGCTTTCACCCGTCACGCACGGTACTTATCCTCGTCGCCTCCTTTTTC TCCCCAACGTGGAGGCAGGGAATTTACCCAGCTGGGTAATCTCGGCTGCC TCGGCTTGGCGCCGTCATGGTCTCTTCTTACCTCTTCTCATCTCCACCTG CTGGCCTCCTCTTCTTCCTCCAGATACATCATACAGCGACCATGGCGCCC AAGAACAAAGCCGAGGTCGTGGAGAGCAAGACGCCGGCCGAGTTCTTCAG TGAGCATCAGTCAATTTGCGGTTTTGATAACGTACGTTTGCCATGGGATG GAGGTCAGGAGAGTGGGAATGAGGAGGCTGGATGTCTTATCTTGGAGGCT CCGTGCCCCACTAGACCAGATCAGAGCTGCATGTCTCGAGAGCATGCATT TCCGTGGTAGAGTATACCTTCTCGTTTGATCTTACTAACCTCACCGACCT CTTGTCCTCCTCTCTACCCAAATCGCAAATTCTAGCCCGGGAGGTCCCTG TACACAACCGTGCGAGAGCTGGTGGAGAACGCGCTGGACGCGGCCGAGTC CATCGAGGTACTTCCTGACGTGTCAATCACCATCGAGGAGCTGACGGAAG AGGAGCTGAACGAGTTGCGTGGCATGGAGAGTCGGGAAAGGGTGGACGTG GGTCTCTTCCATAAAGCTTCAGGGGGAAGGAAGAAATACGGCGGCGGTGG AGGGGCAGCGGTGGCCACAGACAAACATGACAACGACTTAAAGCCCGACG AGAAGCAGCTGCAGGTGTCCGCGCCGGTTGCATTACCACCGAAGAAAAAG GAGCGGGGCACGAGTTATTATCGGGTGACGTGTGAGGACAACGGGTGCGG CATGGCCCATGACCGGATACCGGACATGCTCGGCCGCGTCCTTTCGAGCA GCAAATATGGAGTGCGGCAGACGCGGGGAAAGTTCGGGTTGGGGTCCAAG ATGGCCTTAATCTGGTCCAAGAAAAGCACGGGGCTGCCAATCGAGGTGCG GAGCGCGCATTCGACAGAGACAAGCCGTGCGCCAGGATACGTCTCCCGGT GTATTTTGGACATTGACATCTATCGGAATGAGCCCGCGGTGAAGCTGCAC GAGAAGGTGGCCAACCCCCAACAATGGCGAGGGACGCGGATCGACGTGGT AGTGGAAGGGAACTGGAGCACGTACAAGACACATATTATGACCTACTTTC AGCAGCTGGCTATCATCACACCCTACGCCAAAATGGACTTCACCTTCCGC GCCCTCTCTAACGCGGCCCGCGAAGTCGTCACGCAATACGCCCGCCGCTC CGAGCAGATGCCATCCCCCGCCCAAGAGGTCAAACATCACCCTTCTTCCG TCAACCACCTCATCATCCAGCAGCTCTTGAAGCGCACCAAGGCTAAGAGT CTTCTTGTCTTTCTCTCCGCCGAGCTCGCCTGCGTCAACCGTCCCCTGGC CTTGCGCATCGTTAAGGAATTAGGGAGTGGTTTCACCGAGGATATGGGGC CCGATAAAATGGATGCAAATAAAACCATTCGGCTGACGTCCATGCTCAAG TCGGTCTCGATTTTCAAGCCCCCCGATGGCAGCTGTCTTAGCCCGGCCGG CGAGTATAACCTGCGCCTGGGAATCATGAAGGAGCTGCACCCGGACGTGA GAAGGGTTGGGAGGTGTGAGGAGGCAGAGATATGGGGAGTTGGATTAAGA AGGTCGTTCTCGTTACACTCCCCCACCAATGTTCACCCATCTCCTCCTCT CTATCTTCCTGGACATAAAACAGTATGTTGCGACCGTCAGCGAGCAAGCT GCGGCATTTGAGGGCCACCCCTTCATTGTGGAGGCCGGCGTGTCCCTGGG CGGGCAGGCCGTAAAGGATGGCATCAACGTCTATCGGTTTGCCAATCGCA TCCCTCTTCTTTTCGAGGTGCGCGCGTGAGTCCAGCAAGTTCGATGTTTC CATCTATTCTCTCGGTGATTTGATGGTGTCAAAATAGCGATTTTTATGAG ACTCTGCGCCATACGCTAACTCAACTAACCTTTTACTCGCCCACCTACCC CTCCCTTCTGCCCAGGCCGGCAACGACGTTGTCACTCAAGTCGCTAATCG CCGCATCCATTGGCAGTCCTACAAGATCGACCCCAAGCGGGACCGCGTGG GTGTCTTTGTCTCTATCGTCAGCACCAAGATCCCCTTTAAGGGCACGGGG AAGGAGTACATCGGTGACGACACGGAGGAGATCCGCAAGTGCGTTAAGAA CGCCTTGCAGCGGTGTTGCAAGCAGTTGAAACAGCACCTGCTTACGCGCA ATGCCGCCAGGTGAGTACGAAGAAGAAGGAGAAGAAGAAGTGAAAGTGTC GCTGCTGGAGCAGAGAGTACGAAAGGAGAGAGTAGGGCGGTGGTCAATCA TTCTTTGTATAACAATCATCTTTTTGTTGCCCTTAGTTCCGATCATTTTC AATCCTCCCATCTCCTTTTACACTCTTAAAAGAGACGTCCGGGAGCGAAA GAAGAACCTCCTGCGCTACACACCCGACGTGGCCCGGGCCATCGCCGTGG TTCTAAACGGCATCAACAAGCGCAAGCGCATGGTTCAGGGCGAGTTGGTG GAGGAAGACGACGGGGGGGGTCGGGGCAAGCAACCCCAGCGGCCTAAGGA TGCCAAACAGCTGAAGCTGTACGTAGAGATGGAACGCAAGTGGGCGGCTG CTGCGGGGGGGGGATCCTCGTCGTTGTTGGGGCTCTTGGGGGAGGCGGAA GACTTGGCTACCTTTGATGTACGTATGCTATGCTTTGGCCTGATGGAGGC TTTGATTGATCTTGGATTGAGCTTGGTAATTGAATCTATCTACCTCTCTG CCGATTTTTCCCATCAATCATATAAACCTAATCCTAATGATTATAAAGAC TAAAAACACATGAAAAAAATAAAAATATTGATTTATTGGGTCAATCTCAT GGGGAATTTTCCTTTCAACGCCTGAATCACTCAACCAGCCCTCTACCACT TTCCTACCTGCAGAAATTGCTACGCGCCAGGCTGGAGTCCGCCATCGAGA AGGTAGACCTAGAGAGCGCCTTGGAAGCCGCTGCCATCGACCGAGGCAAG GGCGGACCCGCATCCAAGGAGTCCCTCTTCATCGCCCCGCTGCGAGCTGG CACGCACTTCACAACACCGCTGGTCAACTCTGTGTGTAGCATACGCTTTT TTTCGTCCGCGATGGTGGTGTATAAATAAGAGGACGGATTAGAAGGGGTC CGTATGTGTAAAGCATCATCTTGCCATGACAAAACCGAATAGGTGAATGG AAGAGATGGGAAGCGGGTTGAAGAGGAATAACAAAGAAAAGTGTAAGAGG AAAAGATAAGAAGCAAACAGCTGTAATTGTGCTATCTTTTGTTACATAAA TATGCGCGTTTTGGGCTTCTGTTTCTCCCTTCGCTCCGGTGCACACAAGC GGGCCCTTATCCGCTACGTTGCATCTCCGTCTGTGAATTCTTCCAGTCGC TTCTCTTACACATCTCTTTGTCTTCGATTTTCCCTTTCTACCCTCCTCTC CTTCCCTGAAGCTAAGCAGCCTAGCTAGGGGCCCTCCGTCTCCTCCTCAG ACATGATACACAGCTGCTGGATGGCCTCCGCGCGTTGTTTCACCTCCTCC TGCAACTGCTGTTTGGTTGCGCTGGCGATTTCCATGATCGCTGCAAGGGC TTGCTTATTCCTTTCCATTTGCTCTTGGTCCTCTCTGCTACCGGTAGCTG CCACAGCATTTATGATGATACTATCCTTGAGCTCCGTGATCTGTAGATAG GTGGGTTTGGAGGGGGAGAAACGATGGGTCAACTGAGGATGGATGTGCCT ACGTTCAGATGGCTGACAATCACAACAAATGACACCTTTGGAACGCCTAT CCCCTCCACTGTGCAGACACAAGCCATCCAAGAGATAGGAGGATGAGAGG GAGTAATCTTGACGTACCTTGTCTTCAATCCTTACGATGGCCCCATTGAC GAAGGTAGACATGAAACTCGTCTCACGGGTCAGCTGGGCGGTCGTGTCTT CTCGCACCTGCTGCAACCTCTCTTGCACCTTTTTTTCCACCTCCTCGCTG ATCATCCCAGCAAGCTTTTCATGGACCGCCGAGGAGTACAAAATTTGCTG TGTGGAATAAAAAAACAGGGGGGAAAGGGAGGGTGTCCGTATGTGAGTTT TATCAATTACGTCGCGCTGCTCTCTTCCCCTGCTCCTCCCCGCCCAAGTA TATGTCCCTCCATAGCCAGCGCATAAACCCACCTCAAGAATGGTCACATC TAGCAACTCGTCCCTGTTCGTGGCGATGATGGAAGCTGTTTCAGCGGCAG GGGGCTTGCGAGCGGTATCGGGCAAAGTTATAGACTGAATGCACTCGTCG TTGATGTTGGTGCTGTTGATGCTTCCGCTGTTTCTGCGAGTGCTGGTATA AGTGTTGGTGTTATCCACTGGGGAGGTGATGGTGCGGCGCGACATGCTGT GAGTGGACGGGCAGAGCATTTGGGGTACTGTTGCGGCACCTCGAGGAGAG GACAGGTTGTCTGCTCTTCTGGTGTTGGGGGACTGCGCAAGTGCACCTAG GACAGAGGAGGCTGTCGAGGCAGAGGCAAGCGGAGTAGAATGGAGTTTAG GAGAGTATGCGAGGGGTGCCTCGAAATTATCGATGACCTTGATGTTGCCG AGGTGCTGGAAAAGCCCGTGCTTTGGTTCGCAGGTAAAGTACCTTTCTCC TTTAAATTCGCCGTCATGGTTGCCACTTGGCTCGTCCAGTCGGATGCCTG CCCACATGGTTTCAGGGCGGGTGCTAAAGTGCGTCTGGCCTACATACAGC ACCCTGCCAAACAACGTTTTCTGCTTGTGCGACACTTTGACGCGGGAACC GACCCGGGGGGTGGAGGGGTCTAAAGGGCTTCGGGGAAGTGGCAGCTCAG CACGATGGTGCGAGGAAGGAGGAAGCGCAGGAATAGCAGCATAAAGGGCT TGATTGTTAGCAGCAGCGGGGCTGCGACTCCCGAAACTGCTGCGGGGCGA AGACGGGCGAATACTCCCTGTGTGGCTACTTGCCCGCCTGTGAGGCAAGG AGGGGGACAAAATGTCGTTTTCGACGCGACTGTGGACAGGAGGAGGACGC ATCAATCTCCCTTTGAATCTAGATGTCAACAATGTACAGCAACCCCGAAG TCTGTTGGAGCCGTCTGCACAGGGGCGACGCCTGT
back to top

Coding sequence (CDS) from alignment at chr4:913910..919494-

>NO04G03300.3 ID=NO04G03300.3|Name=NO04G03300.3|organism=Nannochloropsis oceanica|type=CDS|length=1719bp|location=Sequence derived from alignment at chr4:913910..919494- (Nannochloropsis oceanica)
ATGGTCTCTTCTTACCTCTTCTCATCTCCACCTGCTGGCCTCCTCTTCTT
CCTCCAGATACATCATACAGCGACCATGGCGCCCAAGAACAAAGCCGAGG
TCGTGGAGAGCAAGACGCCGGCCGAGTTCTTCAGTGAGCATCAGTCAATT
TGCGGTTTTGATAACCCCGGGAGGTCCCTGTACACAACCGTGCGAGAGCT
GGTGGAGAACGCGCTGGACGCGGCCGAGTCCATCGAGGTACTTCCTGACG
TGTCAATCACCATCGAGGAGCTGACGGAAGAGGAGCTGAACGAGTTGCGT
GGCATGGAGAGTCGGGAAAGGGTGGACGTGGGTCTCTTCCATAAAGCTTC
AGGGGGAAGGAAGAAATACGGCGGCGGTGGAGGGGCAGCGGTGGCCACAG
ACAAACATGACAACGACTTAAAGCCCGACGAGAAGCAGCTGCAGGTGTCC
GCGCCGGTTGCATTACCACCGAAGAAAAAGGAGCGGGGCACGAGTTATTA
TCGGGTGACGTGTGAGGACAACGGGTGCGGCATGGCCCATGACCGGATAC
CGGACATGCTCGGCCGCGTCCTTTCGAGCAGCAAATATGGAGTGCGGCAG
ACGCGGGGAAAGTTCGGGTTGGGGTCCAAGATGGCCTTAATCTGGTCCAA
GAAAAGCACGGGGCTGCCAATCGAGGTGCGGAGCGCGCATTCGACAGAGA
CAAGCCGTGCGCCAGGATACGTCTCCCGGTGTATTTTGGACATTGACATC
TATCGGAATGAGCCCGCGGTGAAGCTGCACGAGAAGGTGGCCAACCCCCA
ACAATGGCGAGGGACGCGGATCGACGTGGTAGTGGAAGGGAACTGGAGCA
CGTACAAGACACATATTATGACCTACTTTCAGCAGCTGGCTATCATCACA
CCCTACGCCAAAATGGACTTCACCTTCCGCGCCCTCTCTAACGCGGCCCG
CGAAGTCGTCACGCAATACGCCCGCCGCTCCGAGCAGATGCCATCCCCCG
CCCAAGAGGTCAAACATCACCCTTCTTCCGTCAACCACCTCATCATCCAG
CAGCTCTTGAAGCGCACCAAGGCTAAGAGTCTTCTTGTCTTTCTCTCCGC
CGAGCTCGCCTGCGTCAACCGTCCCCTGGCCTTGCGCATCGTTAAGGAAT
TAGGGAGTGGTTTCACCGAGGATATGGGGCCCGATAAAATGGATGCAAAT
AAAACCATTCGGCTGACGTCCATGCTCAAGTCGGTCTCGATTTTCAAGCC
CCCCGATGGCAGCTGTCTTAGCCCGGCCGGCGAGTATAACCTGCGCCTGG
GAATCATGAAGGAGCTGCACCCGGACTATGTTGCGACCGTCAGCGAGCAA
GCTGCGGCATTTGAGGGCCACCCCTTCATTGTGGAGGCCGGCGTGTCCCT
GGGCGGGCAGGCCGTAAAGGATGGCATCAACGTCTATCGGTTTGCCAATC
GCATCCCTCTTCTTTTCGAGGCCGGCAACGACGTTGTCACTCAAGTCGCT
AATCGCCGCATCCATTGGCAGTCCTACAAGATCGACCCCAAGCGGGACCG
CGTGGGTGTCTTTGTCTCTATCGTCAGCACCAAGATCCCCTTTAAGGGCA
CGGGGAAGGAGTACATCGGTGACGACACGGAGGAGATCCGCAAGTGCGTT
AAGAACGCCTTGCAGCGGTGTTGCAAGCAGTTGAAACAGCACCTGCTTAC
GCGCAATGCCGCCAGGTGA
back to top
Synonyms
Publications