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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr3 | genome | chr3:145057..148158 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO03G00460.1 ID=NO03G00460.1|Name=NO03G00460.1|organism=Nannochloropsis oceanica|type=mRNA|length=2999bp
ATCGGAATATGGGGGTTTGGTGATGCCTTCCACGGTACACTGTCGGCCTG
CTTAGGCACGCGCCATTGATTGAAAACCCCTCCACGAGTTGCTGAAGTCT
TTTTGGTATGTCTTCCTTTAGAAGGCCGCCAACAAGGACTTACTGCGCCC
TTGATTTCTCTTTTCTTTTATGTGGCCAGGCGTGCATCTACATCTCCCCT
CTCATCCTTCACAGCACTCCTTGTTCCACAGACTTCACCATTACCCAATT
CGCCTTGTGCATGGACGCTACTCGGTCCCTCGAGGATGCGCAACGCACCA
TGCGCTTGAATGAAAAGGTACGTGCGCGTGCGCAGTTTATATATCGGATC
CTTTCTCTCCTCCCGTTCACACCAACTTCGGACGGCTTGCAGACGACCGC
GTTGCTACTCACAGGTCGTCGACCCGACGCTCCACCGTACCTGGGGCCAG
GAGCATCAGAGAGCAGCAGCGAAGCGACCTACCTGTCGTTGCTTTGTGAC
CTGGAAGAGGCCAAGAAGAAGGGTAGAAAGGGTTGCGGCACTGACATGAC
GACGACGCACACGGTGCCGCCCAGCCATATCGCAGGGCTACTGCGGCAGG
AGATTGCCAGGCAGAAAAATCTGATCGCTCAGGACGCTGCCCGTTTCCAG
TCTTTTCAGGCGTCCCTGTTCTACACCCAACAAATCTATGAGCATGGCCT
TAAAAAGGTAGAGAAATGCGCGACATCGAAGGTATACAATAAGGAGATGA
ATGGCATGTTGAAAGACACCATCCGACGGACACTGGAAGGGTTGCGAGCT
GGAGGAGAGGGAGGAGAGATAGGAGGAGGAGGAGGAGGAGAAGGAGGAGA
AGGAGGAGGAGAAGGAGAAGAAGGGGGGGAGTGAACGAGGAGGGGGGGAA
GATTCTTGATGTGAGTAGTAAAAAGACAGCCATGTATCTAAATGATTCAA
ATATTAAGAAAGAAATTAAAGGAGGAAAGCATGAACCTAGAACAACGCCC
TCTCCTCTTGTTTATCCATCTGTATTTTTCTTTTTTCAGTTTTCTTCACC
ACAATGGATCTCTCTCACTTACTACTGCTGCTACTACTGCTGTGGCTGCT
GCTGTTGCTGCTGTTTTCTTTTTTCTCTTCCTTATCTTTCATGCCTCTTC
CTCCTCCTCCTCAACGTATTACATGCTTCATTTTTAAATTTTTCGTGTAC
ATGTAAGTGTGCATCTTTCTCTCTTCCTCCTTCTTTCCTCCTTTCACTCG
CTCATGCACATACATACGGACGGACGCGCAAACACAAACCCTCCCTCTCT
TTCCATTTTGTCCTACTTGCCTTCTTCCTGCTCCCTCACTCGCGATGTGC
GGATAAATCCCCCGCCATGCTGCTCATCCTCCTCCTCTTCCTTCTCCTCC
TCCTTCTTTTCCTCACCTCCCCCGACGTCCTTCCCTGGGACTCTCCGCTA
TACACTCGCACCTAATTACGACGCTCAAAATACGTCCCTATCCGTCCAAA
GCCCACCTGCACCTCGTCCGCTATACACACAAGAGGAGAGACGGGAGGGG
CAGGGGTACTCCTATCTCCCTTCCTTCTCCCATTGCTTCTCTTCTCGTTC
CTTGCCCGCCTTACAACTTCATGGGCTTAGGCATCTTCAAAGGGGAAAGC
CCTTGTTTGAAGGGAGAGGTGCGTGAAGGAGAGATGCCCTTGGGCTGCTG
GGAGGAGGGAGGGGAGGAGGACGAAGGGGAGGGGTTGACACGGCTTGCGG
CTTGAGGCATGGGGGTTGGAGAGGCTGGCTCTTGTTGTGGTTGTTGCGGC
TAAAGGAAGGAGGGAAGGAGGGAGGGCGGGAGGGAGGGCGGAAGAAAGGA
AGTTAGAACCGAGCGGGGCGGGTCGTAGTACACCTAGTTATGGCAATCTT
GTGGTACCCTCCCTCTGTCCCTTCAGACAGTGCAGTGCGTTATGAGGCAA
GAGAGGAGACATAAGCATCTATACGCCTCATGCTGTCCTTATCTCTCTCT
GTCGTGGTTTAAAGACAGTCCAAATTTTCATTTGTTCCTCTCGTTCCTCC
ATCTATCGCAGATGTCAAAGACGTCAAGAGACCCAGCCTCGGTCGAGACC
GCATAACCCTATTTGGACCGCTCTAATTCGAGTTCGGCACCCGTGACATG
TAAAGGTGAGCGCTCATGAAGCGCATGCACAATGCCTCTTCGGTGGGAAC
ACAGCGCACATGCAGCGGGGTATCTGTGGATCCTCCCTATCCCTCCCTCC
CTGACCCTCCCATCCTCGCACACACGTACCTGATGGTCCGGCTGCATCTT
TCTAATTTCCTCTTTCTGGTTGTGCTGTGGTGACGGGGGGGATAGGCAGG
GCGTTAGGGATGAGGGAGGCCTGGATCTGGAATGCATCTCCGGAAGTCGT
CATCATTCAAGTGCACGCGTGCGTGGACGGTTGGACAAACAGTCCATGGG
GCAGGAAGTCGCCAGGGGGCATTTCGAAATTAAACAATGCATTAAGTGAG
ATACAGAGAGACATCTGCGAGATGAGGCAGGGGTCATCCCAATGCAAAAA
AATGATCGGCATCACAACCGACGAGCTTTCACTGGAAAGGGGAGGGAGGC
AGGCTCGCACTATAATCGAGCGATTTTACACATAGAGGTCAAGGGACATG
TCACTCAATCTACAGGGTCACACATCACACAAGTAGACAGACACTCACTC
AACGTAAATCTTTCTGAAGGGTTGTCTGCGAGGATTAAGGAAAATGTCAT
TCATTCATTTTACCTTTCGAGTGGCAAAGTGCCCACCGACAAAGACCTCC
CCTTGAGCCTTCCATGGGCCCTCCCTGCGAGCTTGGTGGGGGTGTCACGT
TGAGTATCGAATAGCCCTCCCAAGTGGTGTGTATGTGTGTGTGTGTGTTC
CTGTCACTGTGGTGCCGTCTCTTTTCCTCTCTCTCTCTTAATTCTGGTGA
GCGCAACTAAAGTAAAAAGCTTCCAAGAGAGAAATCTTGACACCACGAT back to topprotein sequence of NO03G00460.1 >NO03G00460.1-protein ID=NO03G00460.1-protein|Name=NO03G00460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=259bp
MSSFRRPPTRTYCALDFSFLLCGQACIYISPLILHSTPCSTDFTITQFAL
CMDATRSLEDAQRTMRLNEKVRARAQFIYRILSLLPFTPTSDGLQTTALL
LTGRRPDAPPYLGPGASESSSEATYLSLLCDLEEAKKKGRKGCGTDMTTT
HTVPPSHIAGLLRQEIARQKNLIAQDAARFQSFQASLFYTQQIYEHGLKK
VEKCATSKVYNKEMNGMLKDTIRRTLEGLRAGGEGGEIGGGGGGEGGEGG
GEGEEGGE* back to topmRNA from alignment at chr3:145057..148158+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO03G00460.1 ID=NO03G00460.1|Name=NO03G00460.1|organism=Nannochloropsis oceanica|type=mRNA|length=3102bp|location=Sequence derived from alignment at chr3:145057..148158+ (Nannochloropsis oceanica)
ATCGGAATATGGGGGTTTGGTGATGCCTTCCACGGTACACTGTCGGCCTG
CTTAGGCACGCGCCATTGATTGAAAACCCCTCCACGAGTTGCTGAAGTCT
TTTTGGTATGTCTTCCTTTAGAAGGCCGCCAACAAGGACTTACTGCGCCC
TTGATTTCTCTTTTCTTTTATGTGGCCAGGCGTGCATCTACATCTCCCCT
CTCATCCTTCACAGCACTCCTTGTTCCACAGACTTCACCATTACCCAATT
CGCCTTGTGCATGGACGCTACTCGGTCCCTCGAGGATGCGCAACGCACCA
TGCGCTTGAATGAAAAGGTACGTGCGCGTGCGCAGTTTATATATCGGATC
CTTTCTCTCCTCCCGTTCACACCAACTTCGGACGGCTTGCAGACGACCGC
GTTGCTACTCACAGGTCGTCGACCCGACGCTCCACCGTACCTGGGGCCAG
GAGCATCAGAGAGCAGCAGCGAAGCGACCTACCTGTCGTTGCTTTGTGAC
CTGGAAGAGGCCAAGAAGAAGGGTAGAAAGGGTTGCGGCACTGACATGAC
GACGACGCACACGGTGCCGCCCAGCCATATCGCAGGGCTACTGCGGCAGG
AGATTGCCAGGCAGAAAAATCTGGTACGTTTCATCATCCTCAAGTCCTTA
TCCACATCTACATTCCTTTTTCCTGACTTCTCCTCTCTCCCTTCCCTCCT
ACCTCTCTTCCTCCTCCCATTTTTAGATCGCTCAGGACGCTGCCCGTTTC
CAGTCTTTTCAGGCGTCCCTGTTCTACACCCAACAAATCTATGAGCATGG
CCTTAAAAAGGTAGAGAAATGCGCGACATCGAAGGTATACAATAAGGAGA
TGAATGGCATGTTGAAAGACACCATCCGACGGACACTGGAAGGGTTGCGA
GCTGGAGGAGAGGGAGGAGAGATAGGAGGAGGAGGAGGAGGAGAAGGAGG
AGAAGGAGGAGGAGAAGGAGAAGAAGGGGGGGAGTGAACGAGGAGGGGGG
GAAGATTCTTGATGTGAGTAGTAAAAAGACAGCCATGTATCTAAATGATT
CAAATATTAAGAAAGAAATTAAAGGAGGAAAGCATGAACCTAGAACAACG
CCCTCTCCTCTTGTTTATCCATCTGTATTTTTCTTTTTTCAGTTTTCTTC
ACCACAATGGATCTCTCTCACTTACTACTGCTGCTACTACTGCTGTGGCT
GCTGCTGTTGCTGCTGTTTTCTTTTTTCTCTTCCTTATCTTTCATGCCTC
TTCCTCCTCCTCCTCAACGTATTACATGCTTCATTTTTAAATTTTTCGTG
TACATGTAAGTGTGCATCTTTCTCTCTTCCTCCTTCTTTCCTCCTTTCAC
TCGCTCATGCACATACATACGGACGGACGCGCAAACACAAACCCTCCCTC
TCTTTCCATTTTGTCCTACTTGCCTTCTTCCTGCTCCCTCACTCGCGATG
TGCGGATAAATCCCCCGCCATGCTGCTCATCCTCCTCCTCTTCCTTCTCC
TCCTCCTTCTTTTCCTCACCTCCCCCGACGTCCTTCCCTGGGACTCTCCG
CTATACACTCGCACCTAATTACGACGCTCAAAATACGTCCCTATCCGTCC
AAAGCCCACCTGCACCTCGTCCGCTATACACACAAGAGGAGAGACGGGAG
GGGCAGGGGTACTCCTATCTCCCTTCCTTCTCCCATTGCTTCTCTTCTCG
TTCCTTGCCCGCCTTACAACTTCATGGGCTTAGGCATCTTCAAAGGGGAA
AGCCCTTGTTTGAAGGGAGAGGTGCGTGAAGGAGAGATGCCCTTGGGCTG
CTGGGAGGAGGGAGGGGAGGAGGACGAAGGGGAGGGGTTGACACGGCTTG
CGGCTTGAGGCATGGGGGTTGGAGAGGCTGGCTCTTGTTGTGGTTGTTGC
GGCTAAAGGAAGGAGGGAAGGAGGGAGGGCGGGAGGGAGGGCGGAAGAAA
GGAAGTTAGAACCGAGCGGGGCGGGTCGTAGTACACCTAGTTATGGCAAT
CTTGTGGTACCCTCCCTCTGTCCCTTCAGACAGTGCAGTGCGTTATGAGG
CAAGAGAGGAGACATAAGCATCTATACGCCTCATGCTGTCCTTATCTCTC
TCTGTCGTGGTTTAAAGACAGTCCAAATTTTCATTTGTTCCTCTCGTTCC
TCCATCTATCGCAGATGTCAAAGACGTCAAGAGACCCAGCCTCGGTCGAG
ACCGCATAACCCTATTTGGACCGCTCTAATTCGAGTTCGGCACCCGTGAC
ATGTAAAGGTGAGCGCTCATGAAGCGCATGCACAATGCCTCTTCGGTGGG
AACACAGCGCACATGCAGCGGGGTATCTGTGGATCCTCCCTATCCCTCCC
TCCCTGACCCTCCCATCCTCGCACACACGTACCTGATGGTCCGGCTGCAT
CTTTCTAATTTCCTCTTTCTGGTTGTGCTGTGGTGACGGGGGGGATAGGC
AGGGCGTTAGGGATGAGGGAGGCCTGGATCTGGAATGCATCTCCGGAAGT
CGTCATCATTCAAGTGCACGCGTGCGTGGACGGTTGGACAAACAGTCCAT
GGGGCAGGAAGTCGCCAGGGGGCATTTCGAAATTAAACAATGCATTAAGT
GAGATACAGAGAGACATCTGCGAGATGAGGCAGGGGTCATCCCAATGCAA
AAAAATGATCGGCATCACAACCGACGAGCTTTCACTGGAAAGGGGAGGGA
GGCAGGCTCGCACTATAATCGAGCGATTTTACACATAGAGGTCAAGGGAC
ATGTCACTCAATCTACAGGGTCACACATCACACAAGTAGACAGACACTCA
CTCAACGTAAATCTTTCTGAAGGGTTGTCTGCGAGGATTAAGGAAAATGT
CATTCATTCATTTTACCTTTCGAGTGGCAAAGTGCCCACCGACAAAGACC
TCCCCTTGAGCCTTCCATGGGCCCTCCCTGCGAGCTTGGTGGGGGTGTCA
CGTTGAGTATCGAATAGCCCTCCCAAGTGGTGTGTATGTGTGTGTGTGTG
TTCCTGTCACTGTGGTGCCGTCTCTTTTCCTCTCTCTCTCTTAATTCTGG
TGAGCGCAACTAAAGTAAAAAGCTTCCAAGAGAGAAATCTTGACACCACG
AT back to topCoding sequence (CDS) from alignment at chr3:145057..148158+ >NO03G00460.1 ID=NO03G00460.1|Name=NO03G00460.1|organism=Nannochloropsis oceanica|type=CDS|length=777bp|location=Sequence derived from alignment at chr3:145057..148158+ (Nannochloropsis oceanica)
ATGTCTTCCTTTAGAAGGCCGCCAACAAGGACTTACTGCGCCCTTGATTT
CTCTTTTCTTTTATGTGGCCAGGCGTGCATCTACATCTCCCCTCTCATCC
TTCACAGCACTCCTTGTTCCACAGACTTCACCATTACCCAATTCGCCTTG
TGCATGGACGCTACTCGGTCCCTCGAGGATGCGCAACGCACCATGCGCTT
GAATGAAAAGGTACGTGCGCGTGCGCAGTTTATATATCGGATCCTTTCTC
TCCTCCCGTTCACACCAACTTCGGACGGCTTGCAGACGACCGCGTTGCTA
CTCACAGGTCGTCGACCCGACGCTCCACCGTACCTGGGGCCAGGAGCATC
AGAGAGCAGCAGCGAAGCGACCTACCTGTCGTTGCTTTGTGACCTGGAAG
AGGCCAAGAAGAAGGGTAGAAAGGGTTGCGGCACTGACATGACGACGACG
CACACGGTGCCGCCCAGCCATATCGCAGGGCTACTGCGGCAGGAGATTGC
CAGGCAGAAAAATCTGATCGCTCAGGACGCTGCCCGTTTCCAGTCTTTTC
AGGCGTCCCTGTTCTACACCCAACAAATCTATGAGCATGGCCTTAAAAAG
GTAGAGAAATGCGCGACATCGAAGGTATACAATAAGGAGATGAATGGCAT
GTTGAAAGACACCATCCGACGGACACTGGAAGGGTTGCGAGCTGGAGGAG
AGGGAGGAGAGATAGGAGGAGGAGGAGGAGGAGAAGGAGGAGAAGGAGGA
GGAGAAGGAGAAGAAGGGGGGGAGTGA back to top
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