jgi.p|Nanoce1779_2|596238, gene_6760 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|596238
Unique Namegene_6760
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_17:25161..27866 +

Link to JBrowse

Properties
Property NameValue
TranscriptId596324
ProteinId596238
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_17supercontigscaffold_17:25161..27866 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0030599pectinesterase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL026ncniL026Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G02510NO13G02510Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|596238mRNA_6760-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|596238mRNA_6760Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|596238

>mRNA_6760-protein ID=mRNA_6760-protein|Name=jgi.p|Nanoce1779_2|596238|organism=Nannochloropsis oceanica|type=polypeptide|length=649bp
MGSSLSRTAVTGGSEGGGGEAALMSGHHSCERQEGLDVELRKDKAVPIDV
SCEKSVHGFVTEMYRFSQGGRCRRCRRPKQQQVEDHKQELMTLVDICVDA
ICEKILIYEAPLPFDCLPPELVRRLLDSLMNHKALTKLTLQSLRDCDVTR
LDLSSCKDVSDDWLEPFGTKSLTHLSLAYCPGVTDAGLLHLTELGALRHA
NLTGCTGLRFGGLTPFKQCWLMTTLNLSGCRHLMDDALKPLAHLPALQHL
RLRGCRQLTDVALTFLSPLTPQLKTLDLNQGGQFSASALCACLEGLTEIE
FLDLGYCPEGIGREALEVLTRGRASATLQTLILDASRKLTNADLYLLGQS
NSLRVLSLRACPSISDAGLCQLPQGLEDLDVSHCRGVRLLPNQILMSLRK
INLAHSGLRDVGSLSEFTALEEVNLDSCAIGNAGLSALLPLKKLQRLNLA
DTGISNHGMDVLAALPSLSSLSLFYTNITNTGVQQLSSLKNLTSLNLDSR
ELTDQSLLHISTLTKLEHLDVFSARVSDVGLCFLTSLSGLVSLEICGGKI
TDLGLKYISCLRALRRLNVSQNMRVTNMGLYYLAQMSDLEVLNVSHCQVS
APAALDPLLKMRMLKVLAVNGCRGMADEGVLLELRRSLPVLKTVRAVC*
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Synonyms
Publications