jgi.p|Nanoce1779_2|670872, gene_4528 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|670872
Unique Namegene_4528
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_10:829625..837569 +

Link to JBrowse

Properties
Property NameValue
TranscriptId670958
ProteinId670872
Product nameTransport protein Trs120 or TRAPPC9, TRAPP II complex subunit-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_10supercontigscaffold_10:829625..837569 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL021ncniL021Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G00280NO09G00280Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|670872mRNA_4528-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|670872mRNA_4528Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|670872

>mRNA_4528-protein ID=mRNA_4528-protein|Name=jgi.p|Nanoce1779_2|670872|organism=Nannochloropsis oceanica|type=polypeptide|length=1630bp
MDVLRHAEEEPTSFASHRRLRVAVVPLGGVPDKRFRSYLSLLQRSFSVLP
MANLSKPGSWRKEDSPFKYFSWFDGSLSLQYLDRAPPLSAAAPEWQDYQA
FRRTWAVIGIVHLPSCAPGVIDGIEGEFQERLRDFPHAVAKKLFCFGYSF
GATPSTGVEGGKDGEGGKEVGKESFENHYQNKEELVIFPPEGDHRDSGMS
MVELHMGVILNDVAVVVLSHLEEEVNRMRAGGGTSSSSGSSSSSSGSSSS
MSGKTLAKRGGQWLAGFRSPFDDDPSPAAAAAATTARSTTTTNTSNNNNN
SSSSVPTGIDGSRGRINKWVGDICLLAGTPQDALEAYTQAIGECQALGEG
LWQAGALEGWVAAVEVMQSWELSMEEFLPGGGGGGREGGKGGGEEGGGKK
QQELVAKEIEERGGGALALLELGGAAHASLAVALCFKMARMQGGRGGGRE
GRCVEAWEWVMRAMGLEGLGMPLQVLRTLEAAAICHWLGLERKQAFLLRL
AASQTAELHSPFAALALGRLAAEAYKIVLAPSSPAFSPPSSSSSSPVEND
TRTLSSRPAGGWPCLQKHLLADLISFATAARDVPAACSYYLSLLRLLAEL
EEGRQRAVALGGGGGEGGGKEGGRMVSGGGTINHARSPSSLGGGGGGGGG
GGGGGGGGGGGGMAAASAPSSPRGDVTAFSFASSSTTSFLASSLTRPFPF
LGATGELKEGKKEGGKQHQQHEQWSEGFSRSETMGGEGRGGRGEWEEEEE
EEEEGFEEDYDDSLSDGGGGGEGGRGGSGGGRPLSERWQVRAGIQGMAGG
KGHGGGGRGGKEGKKEGGMGGFSSFTTGAGGGFNALKFLSSTGGGQRGGG
GSGSLGGRSRLLYGRKTNGRSSSWGERREGRGDEEGEGRGELMDLSGQEG
RQGVTWAAGEVAHVALSLSNSLAAPLNIQSIEILVEGGGEVGKEGGAEGT
SGTVVFCYPVTLWIPALRQQHPLTLSLKPLRPGPLVIKGVKMTVFNITSL
VPVDEEGCGPPPCPRPVPRDWYPRQAHSYLRRSKGEAAKEEAASRHEQQQ
QQQQQQQQQQQQQQQRLLPPFTGGGGGRGGVMATRAAAPLDAVPTIHASV
VQALPSLSTRLDRWATHIELLPGEYRQACIELQVMNEVPLGYVEVSVHYK
ALTKKARAAGRPVILYRFTGGAEGGTEGGREGVQEGGEEESSPVSLDPLG
LEALTETLQTALTTRSCLSSLSLPLLFRRVDRFPEADVFIKYSSPTSSSP
ASGNRYFRTLTIPLRFNLKEGLSTTDLAVETAATHIYPPLARAIESAHRG
AWAGKGKGGGRDGKWEGGIREMDAIDTDGSECFLLVEVKNMAGEDLHVKA
CLAGIALSEAELQSGRRGGGGGGEGGGGRRFEYTASVNEGVDSIELLHVT
NRSLTHRLPPCKCFVHTYQDYGKGNLNFAIDSTRAMWSGSLAWTTPVLAP
GETYLHVAFVSFTASGVYGVGMSASYLPVKEGGGGLAAFAKSQRGSLGEG
YGIVETILALNQLDDAMLVYDDKKTTPLVTSSINTFVQALKKAQDGRHAL
GEEEIPVQLLERMEREGLNPAVYTMESLEKGVDEVEAVAVRDEMLEEIKR
GIEEGMKRKEGGKKGGEEEAVAAMDVEDP*
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Synonyms
Publications