Naga_100086g25, gene5545 (gene) Nannochloropsis gaditana

Overview
NameNaga_100086g25
Unique Namegene5545
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:719409..722199 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100086g25
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:719409..722199 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL020ngnoL020Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G02700NO11G02700Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5740rna5740-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5740rna5740Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5740

>rna5740-protein ID=rna5740-protein|Name=rna5740|organism=Nannochloropsis gaditana|type=polypeptide|length=794bp
MRIATIPSLHRHWWPVTSTVAFIARCSSSSIPAPAATPPGPLSTFTEPSH
PQHNTEDEFQCQSSRWGEERRSFMVEIPGSKCRDTEANSSNYLIPSKREW
QKIRESCSQSDFEQAFELLQRSKAGAREYNYVIYACLAARQLDFLEDVAL
EGVRQARTRRQGSRNDQNSLEDDTGCRTERSLPMGVRLDGLVHRLLLAHI
RNGCFERAWRLYRRLAAPVSNTLSTEPWARDNAANTALSQRSQPNGLPLA
GASSISPAPPPGSLSALLPPTLKTFSILLRACTRWRKGVEAKSLVSDADE
YRVDLTRADFEQAISACGSAGDSRNVEWIMKKMTERGMPVSREAQQSLLN
AHFIRGESRAGEALLESMTKAAGQASLRTQDYVSAGLFNKAFTAFDAVSV
PVRKQEDYVAMLTAVSALKDAPRMVNVLEELERGLREGRAGLTVGPTEFG
LACRIFRKAEGQELLEETRQEKGRVGARRRRMGAEEMRCLDVLARLGDRS
GIPFLNKTYVEALIETGREEEARKRLDRWLAKRMERRGRHVVSYASQIGA
LGALGLWPVAHYLYDEMRFLAPHGSWEREIQSFRSLLGVYETEEKRAARC
PGAARGKIVDALHGLALATYKEGIRRGHLNHWHPSREKVMDLHRYSLYLA
VLAVEVVLMDMASESSHAENKMGPRNSHELAAHALSIPAQDLWVITGRGK
HNSSRLINATSSRPNAHGPSYTAGPMHVDETDERQRNMETLSHMRLRDKL
ARALAMQHGLLTEIDLRRLRSDNNCGRLCIRKEAIQTWIKAHNK
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Synonyms
Publications