Naga_100016g27, gene5392 (gene) Nannochloropsis gaditana

Overview
NameNaga_100016g27
Unique Namegene5392
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:332144..334885 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100016g27
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:332144..334885 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL019ngnoL019Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G01120NO11G01120Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5580rna5580-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5580rna5580Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5580

>rna5580-protein ID=rna5580-protein|Name=rna5580|organism=Nannochloropsis gaditana|type=polypeptide|length=452bp
MHKPLDSMNSNVLLARVSLRDNLLCVCDLKGVIVFASDDLLWALGLQGPT
TRHIGASLFDLLADEDVEEYKNSLRRKSGSLLRCKQNGCFVWLDIQCVSH
VPPQLKRALSRVQKARAAGFPSLVCLNNNSISENVNLIADINRAVAPHAM
NNSPLNHQSKALASASCAWAAGNVVGLEENVLTKDRTLDSFLTPAGQEEE
SATRPADKAVGEEDAVTEASDPEEEGIYATRAEPQASVGAINPCLPSFGC
LTLEDGANQGQRATRSLCTTACTTSSSVSSSEQLGDGLALWTDEEQLRQQ
QEEAAMVREYSFREIFEYLSAGAKSMSHATSFSLSGSRASSTLNMGPSTA
AASPSSPAAVLAQPCRDSRPFSERVAAKCRAAPEESFLSSHGLASGSSSW
RLQNKYKVSGYMGKAAATLGLGTVKSAAVGASALRHVPPMLDESGWDWYV
DV
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Synonyms
Publications