Naga_100311g3, gene5294 (gene) Nannochloropsis gaditana

Overview
NameNaga_100311g3
Unique Namegene5294
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:53183..56236 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100311g3
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:53183..56236 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G00190NO11G00190Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5481rna5481-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna5480rna5480-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5481rna5481Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna5480rna5480Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5481

>rna5481-protein ID=rna5481-protein|Name=rna5481|organism=Nannochloropsis gaditana|type=polypeptide|length=393bp
MTLLLPPNATLHRKLQHVKPDNGHPEHQQSTPYGHFGIRITKADSAAINS
TQPIVLTPLFPFVWACEVGQSQVHRLLSYLPTASFPSTINDARINVLTHD
NPTSSPGFLAPSCSFGAVPASNAGSMPSSPPDLAPIPRTNLRKSNRIEQS
TPPLAGCIADRSHRHASCLLGANYRLDDPALIPLVHRRYITRFFYVPYAC
RDMGWVAFSPELRQALKTARSSLSRSFCLKISAFPKNMEVAIGEILLTAP
VAQGCRLEEKELSPSASQASHVLHVVHSPEWSPLFYYGLTQSHSLTGPTS
APPPSFLSFLPPSFEKPPSSSSLPPVSRAYFKMREIWEERLEEGMEGGME
EEMWKKDRKALDVGASPGGWTQYLRYNSRGRGGREKLRRNRGL
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protein sequence of rna5480

>rna5480-protein ID=rna5480-protein|Name=rna5480|organism=Nannochloropsis gaditana|type=polypeptide|length=536bp
MTLLLPPNATLHRKLQHVKPDNGHPEHQQSTPYGHFGIRITKADSAAINS
TQPIVLTPLFPFVWACEVGQSQVHRLLSYLPTASFPSTINDARINVLTHD
NPTSSPGFLAPSCSFGAVPASNAGSMPSSPPDLAPIPRTNLRKSNRIEQS
TPPLAGCIADRSHRHASCLLGANYRLDDPALIPLVHRRYITRFFYVPYAC
RDMGWVAFSPELRQALKTARSSLSRSFCLKISAFPKNMEVAIGEILLTAP
VAQGCRLEEKELSPSASQASHVLHVVHSPEWSPLFYYGLTQSHSLTGPTS
APPPSFLSFLPPSFEKPPSSSSLPPVSRAYFKMREIWEERLEEGMEGGME
EEMWKKDRKALDVGASPGGWTQYLSDKLSQVVAVDGASLHPSLLPSLSNV
RHVPYRIQAEEATEVLKEEGPFHLVCVDINLFPQGAADLILQHVFPHVAH
HALVILTLKFPRKPTGARLQKALRDLERIWAEDPEIYCRSSRKREEGHRD
DEDKSEVLRLLWLHANSSHERTVITWVHRRKSRPPV
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Synonyms
Publications