Naga_100500g2, gene4859 (gene) Nannochloropsis gaditana

Overview
NameNaga_100500g2
Unique Namegene4859
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:967276..969133 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100500g2
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:967276..969133 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003824catalytic activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL006ngnoL006Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G03840NO12G03840Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5032rna5032-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna5031rna5031-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5032rna5032Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna5031rna5031Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5032

>rna5032-protein ID=rna5032-protein|Name=rna5032|organism=Nannochloropsis gaditana|type=polypeptide|length=343bp
MYNSSFASKGCMNVSVTERVLNRGTYSGAEAEELAIAAGGGLSVHKDNTL
EILRERELGRQRQAKDAQKEANLKAKLLQQQENFRKEKATGKGDLEGQGS
VERDSTPLPAGWEAVMDPQGSGDYYYWHAGTNVTTWERPSSQIPTAVPSG
DTGVTTLKNHTSGSFLSSETSGGGEPGHGREPTGRGGTELPRANDLGSLP
EGWKEVKHAATGQICYVHAASGVKRWSRPTIAGDVTSDIQQTRQTHLEAA
RQAELAQTGAKGGKDGGGKKRGREEIDPLDPTGGRGSGGWTQGLGGGDRM
ADSTAGGSLWQQRPLPAPGAVLKKQGGGRGAGRGNQGQYPMRR
back to top

protein sequence of rna5031

>rna5031-protein ID=rna5031-protein|Name=rna5031|organism=Nannochloropsis gaditana|type=polypeptide|length=417bp
MLHIPPRNAGLWFDLFTTPASSLSAVATESQPPSLPLPADTQTTVLDSAM
ASQQRALLQGDRLAKELAAQQARAAARAYVTDKGCMNVSVTERVLNRGTY
SGAEAEELAIAAGGGLSVHKDNTLEILRERELGRQRQAKDAQKEANLKAK
LLQQQENFRKEKATGKGDLEGQGSVERDSTPLPAGWEAVMDPQGSGDYYY
WHAGTNVTTWERPSSQIPTAVPSGDTGVTTLKNHTSGSFLSSETSGGGEP
GHGREPTGRGGTELPRANDLGSLPEGWKEVKHAATGQICYVHAASGVKRW
SRPTIAGDVTSDIQQTRQTHLEAARQAELAQTGAKGGKDGGGKKRGREEI
DPLDPTGGRGSGGWTQGLGGGDRMADSTAGGSLWQQRPLPAPGAVLKKQG
GGRGAGRGNQGQYPMRR
back to top
Synonyms
Publications